Protobothrops flavoviridis ver. 1.0

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDhabu1_s1408_g05034
Locus habu1_scaffold1408 : 826976 ... 847707 : +
To GenomeBrowser habu1_scaffold1408:826976..847707
Genes list of scaffold habu1_scaffold1408

Annotation by Blast2GO
Annotation GO
cell division cycle 7-related protein kinase GO:0000166 GO:0004672 GO:0016310 GO:0043229 GO:0044238 GO:0044260 GO:0044770 GO:0090068

Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
habu1_s1408_g05034.t2 2 1 Pkinase 89 234 1.4013e-45 155.1 7.5e-28 2.8e-24 85.6
habu1_s1408_g05034.t2 1 1 Pkinase_Tyr 91 234 3.6e-15 55.7 9.2e-16 3.4e-12 45.9
habu1_s1408_g05034.t2 2 2 Pkinase 389 593 1.4013e-45 155.1 4.1e-21 1.5e-17 63.6

Expression profile
Libraries FPKM
>Adult
Venom fang forming tissue 4.4
Venom grand-1 10.0
Pit, infrared sensing 6.3
Nose 4.9
Brain-1 3.0
Eye 4.9
fetal fibroblast 9.0
venom gland-2 7.8
Brain-2 2.5
Spleen 6.7
Lung 5.8
Liver 12.0
Kidney 7.3
Pancreas 11.0
Small intestine 6.2
Large intestine 6.3
Stomach 6.1
heart 4.3
ovary 10.7
cheek muscle 6.1

Transcript
Transcript IDhabu1_s1408_g05034.t1
Definition-
>habu1_s1408_g05034.t1
gtggttgttgtacacggtaaaaacaaaaaacaaaaaacacgccacgggagatgcgggatcctgcaggggaaatcggctgg
gtcgttacagttggagagcccactttcacgccactaagcggaggaatcgcgcgtgttttggagggcgagaagaacaagga
aggaaacagcccattggtcatggaggcaattcatctagatgaacaacctcccttgaatgctgaaaacttatttaaaaaac
atgagagcaacaagaaaggaacatttagttctgtttacttggcaataggccaggtacgaggaggccgtgaagaaaaagtg
gctttgaaacacttgattcctaccagtcatcctgtacgaattgctgctgaacttcagtgtcttataatagcaggggggca
agataatgtcatgggagttaaatattgttttagaaaaaatgatcacgtggtaatcgttatgccttatctggaacatgaat
cattttcggacatcttggattctctctcattcgacgaagtaagaaactacacatttaacctcttgaaagctttgaagcgc
attcaccactttggtatcgttcaccgtgatgtcaagcccagtaattttctgtacaacaggcaactgcaacaatatgcatt
ggttgactttggcttggcacaaggaactcctgagacaaaagtggaacttctcaaagttataccatccgaagctcagcaaa
gaggttctgcatacaacaaacctttgataactgtgggaagccaaattgcttccccaacatcaaggcagctcattcatcag
tcagccaccaaaacagcgaataaaaggctttcttccatttcacaaacgcagattaaacaaggacacaaaagaaaggagga
tccagactctcattctgttcagcgttcggtttttggggagagaaatttcaatgtgcgaagctcagcatttcaagcccgtt
ccacagttaaacaacccaggataatggatattccaatgaggaaactgtcggtgaagaagaagacaacttcagttgtaaat
aatggtttaggcaagaaagctgccagcagcaccccagctcactcgacctgtgactgttacgcaaaagatagcgtctgcac
catttgtctttcaagacgtcagcaggttgcgccaagggcaggcactcctggattcagagcaccagaagtattaacaaagt
gccctaatcaaactacagcgattgacatgtggtctgcaggcattatatttctctctctgctgagtggtcggtatccattt
tacaaggctagcgatgatttaacagctttggcacagatcatgactattcgtggctccagagaaaccgttcaagctgctaa
aacatttggtaaatcaatcctgtgtagcaaagaaatcccagcacaggatttaaagaaactctgtgaaaggctgaggggga
aaactaccagctttgacacttcagcaggtgatgtacaaatcaacccttctcaggaatttgctttacaagttggaataggc
aacgctccagattccccccttcagacatccaaaaagcacgtgcaatatcaaaaacaaagcagtcatgaagatggtggtaa
agaaaagaaaactatacagaagccgtctgaacccaaaggatgggacagagttcctaatagcgcctatgatctccttgata
aactattggacttaaatcctgctacaagaattactgcaaaggatgctttgctgcatccttttttcagaaacatgaagcaa
taaaaagacttttgacactgtactatgtgtgtgttaaagtactattagagtcggtcacttttaaaggaaaccaaaaatct
gagaaacattatttacagcgcagtgttggtctaggtgcaattgaagtagtaaatatacttctgcttttcggacaggtttt
taaacaatttcaaagtgcatttgattatttcaccattttatggtgtattcggaaatggcaacatgcaatctatataatgg
gattgaaatctgaggatggttcctttctgctgcgtccttgggttttagcaatcctgttatattatgcagcttcctaatat
ttggttaaatttggctgggcagagatggtaaatgaattattctggtaggtaatgaattaaatgttgatatatttttaatt
tca
Transcript IDhabu1_s1408_g05034.t2
Definition-
>habu1_s1408_g05034.t2
gtggttgttgtacacggtaaaaacaaaaaacaaaaaacacgccacgggagatgcgggatcctgcaggggaaatcggctgg
gtcgttacagttggagagcccactttcacgccactaagcggaggaatcgcgcgtgttttggagggcgagaagaacaagga
aggaaacagcccattggtcatggaggcaattcatctagatgaacaacctcccttgaatgctgaaaacttatttaaaaaac
atgagagcaacaagaaaggagcacttacagatattgaaaagctttatcaagcagtacctcagctttcaaatgtgttcaga
atcaaagggaaaattggtgaaggaacatttagttctgtttacttggcaataggccaggtacgaggaggccgtgaagaaaa
agtggctttgaaacacttgattcctaccagtcatcctgtacgaattgctgctgaacttcagtgtcttataatagcagggg
ggcaagataatgtcatgggagttaaatattgttttagaaaaaatgatcacgtggtaatcgttatgccttatctggaacat
gaatcattttcggacatcttggattctctctcattcgacgaagtaagaaactacacatttaacctcttgaaagctttgaa
gcgcattcaccactttggtatcgttcaccgtgatgtcaagcccagtaattttctgtacaacaggcaactgcaacaatatg
cattggttgactttggcttggcacaaggaactcctgagacaaaagtggaacttctcaaagttataccatccgaagctcag
caaagaggttctgcatacaacaaacctttgataactgtgggaagccaaattgcttccccaacatcaaggcagctcattca
tcagtcagccaccaaaacagcgaataaaaggctttcttccatttcacaaacgcagattaaacaaggacacaaaagaaagg
aggatccagactctcattctgttcagcgttcggtttttggggagagaaatttcaatgtgcgaagctcagcatttcaagcc
cgttccacagttaaacaacccaggataatggatattccaatgaggaaactgtcggtgaagaagaagacaacttcagttgt
aaataatggtttaggcaagaaagctgccagcagcaccccagctcactcgacctgtgactgttacgcaaaagatagcgtct
gcaccatttgtctttcaagacgtcagcaggttgcgccaagggcaggcactcctggattcagagcaccagaagtattaaca
aagtgccctaatcaaactacagcgattgacatgtggtctgcaggcattatatttctctctctgctgagtggtcggtatcc
attttacaaggctagcgatgatttaacagctttggcacagatcatgactattcgtggctccagagaaaccgttcaagctg
ctaaaacatttggtaaatcaatcctgtgtagcaaagaaatcccagcacaggatttaaagaaactctgtgaaaggctgagg
gggaaaactaccagctttgacacttcagcaggtgatgtacaaatcaacccttctcaggaatttgctttacaagttggaat
aggcaacgctccagattccccccttcagacatccaaaaagcacgtgcaatatcaaaaacaaagcagtcatgaagatggtg
gtaaagaaaagaaaactatacagaagccgtctgaacccaaaggatgggacagagttcctaatagcgcctatgatctcctt
gataaactattggacttaaatcctgctacaagaattactgcaaaggatgctttgctgcatccttttttcagaaacatgaa
gcaataaaaagacttttgacactgtactatgtgtgtgttaaagtactattagagtcggtcacttttaaaggaaaccaaaa
atctgagaaacattatttacagcgcagtgttggtctaggtgcaattgaagtagtaaatatacttctgcttttcggacagg
tttttaaacaatttcaaagtgcatttgattatttcaccattttatggtgtattcggaaatggcaacatgcaatctatata
atgggattgaaatctgaggatggttcctttctgctgcgtccttgggttttagcaatcctgttatattatgcagcttccta
atatttggttaaatttggctgggcagagatggtaaatgaattattctggtaggtaatgaattaaatgttgatatattttt
aatttca

Protein
Protein IDhabu1_s1408_g05034.t1
Definition-
>habu1_s1408_g05034.t1
MRDPAGEIGWVVTVGEPTFTPLSGGIARVLEGEKNKEGNSPLVMEAIHLDEQPPLNAENLFKKHESNKKGTFSSVYLAIG
QVRGGREEKVALKHLIPTSHPVRIAAELQCLIIAGGQDNVMGVKYCFRKNDHVVIVMPYLEHESFSDILDSLSFDEVRNY
TFNLLKALKRIHHFGIVHRDVKPSNFLYNRQLQQYALVDFGLAQGTPETKVELLKVIPSEAQQRGSAYNKPLITVGSQIA
SPTSRQLIHQSATKTANKRLSSISQTQIKQGHKRKEDPDSHSVQRSVFGERNFNVRSSAFQARSTVKQPRIMDIPMRKLS
VKKKTTSVVNNGLGKKAASSTPAHSTCDCYAKDSVCTICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGIIF
LSLLSGRYPFYKASDDLTALAQIMTIRGSRETVQAAKTFGKSILCSKEIPAQDLKKLCERLRGKTTSFDTSAGDVQINPS
QEFALQVGIGNAPDSPLQTSKKHVQYQKQSSHEDGGKEKKTIQKPSEPKGWDRVPNSAYDLLDKLLDLNPATRITAKDAL
LHPFFRNMKQ
Protein IDhabu1_s1408_g05034.t2
Definition-
>habu1_s1408_g05034.t2
MRDPAGEIGWVVTVGEPTFTPLSGGIARVLEGEKNKEGNSPLVMEAIHLDEQPPLNAENLFKKHESNKKGALTDIEKLYQ
AVPQLSNVFRIKGKIGEGTFSSVYLAIGQVRGGREEKVALKHLIPTSHPVRIAAELQCLIIAGGQDNVMGVKYCFRKNDH
VVIVMPYLEHESFSDILDSLSFDEVRNYTFNLLKALKRIHHFGIVHRDVKPSNFLYNRQLQQYALVDFGLAQGTPETKVE
LLKVIPSEAQQRGSAYNKPLITVGSQIASPTSRQLIHQSATKTANKRLSSISQTQIKQGHKRKEDPDSHSVQRSVFGERN
FNVRSSAFQARSTVKQPRIMDIPMRKLSVKKKTTSVVNNGLGKKAASSTPAHSTCDCYAKDSVCTICLSRRQQVAPRAGT
PGFRAPEVLTKCPNQTTAIDMWSAGIIFLSLLSGRYPFYKASDDLTALAQIMTIRGSRETVQAAKTFGKSILCSKEIPAQ
DLKKLCERLRGKTTSFDTSAGDVQINPSQEFALQVGIGNAPDSPLQTSKKHVQYQKQSSHEDGGKEKKTIQKPSEPKGWD
RVPNSAYDLLDKLLDLNPATRITAKDALLHPFFRNMKQ

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Okinawa Institute of Science and Technology
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