Gene
| Gene Model ID | habu1_s1408_g05035 |
|---|---|
| Locus | habu1_scaffold1408 : 928506 ... 1109365 : - |
| To GenomeBrowser | habu1_scaffold1408:928506..1109365 |
| Genes list of scaffold | habu1_scaffold1408 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| transforming growth factor beta receptor type 3 isoform x1 | GO:0001568 GO:0001889 GO:0005114 GO:0005539 GO:0005615 GO:0005783 GO:0006955 GO:0007179 GO:0009897 GO:0010633 GO:0010719 GO:0015026 GO:0016049 GO:0030165 GO:0030509 GO:0032354 GO:0034673 GO:0034695 GO:0034699 GO:0035556 GO:0046332 GO:0050431 GO:0050680 GO:0051092 GO:0055010 GO:0060021 GO:0060038 GO:0060317 GO:0060318 GO:0060347 GO:0060389 GO:0070062 GO:0070123 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s1408_g05035.t2 | 1 | 1 | Zona_pellucida | 524 | 786 | 6.1e-38 | 130.7 | 1.40004e-41 | 6.8e-38 | 130.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s1408_g05035.t2 | gi|529437537|ref|XP_005238531.1| | PREDICTED: transforming growth factor beta receptor type 3 [Falco peregrinus] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 1.6 |
| Venom grand-1 | 0.6 |
| Pit, infrared sensing | 0.8 |
| Nose | 0.1 |
| Brain-1 | 2.9 |
| Eye | 0.3 |
| fetal fibroblast | 1.0 |
| venom gland-2 | 0.9 |
| Brain-2 | 2.7 |
| Spleen | 3.9 |
| Lung | 0.3 |
| Liver | 0.1 |
| Kidney | 1.5 |
| Pancreas | 0.1 |
| Small intestine | 1.2 |
| Large intestine | 1.4 |
| Stomach | 0.5 |
| heart | 7.3 |
| ovary | 0.8 |
| cheek muscle | 1.6 |
Transcript
| Transcript ID | habu1_s1408_g05035.t1 |
|---|---|
| Definition | - |
>habu1_s1408_g05035.t1 gcaatggcaaaaccatcctgatatgttgtgcgacgtcacatgacgttgcgaaagaagaagaagaagaagaagaagaagaa gaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaaggcggcaaggatctctggagagg aggaggaggaggcgagggagcagcgcgccccgatcctgcgcgagggaagctggccaggcttctcggaagggaatccccgt ttccaagcgtgcgcggtcattaaaaggctggacaactttcaaagcatccccattaatccttttcttaagatcagcgccgc atttgctttgatgattggatgtttagcatttccaggtcctgtgcctaggagtggctgtctattgtctcaggtcaacagtt cacatcctgtccaagccttgctagaaagttttactgtcttatctggctgtgcaagcaaaggaactgctggattgccacaa gaagttcacgtcctcaacgttaggagttcagaagagtctggccaccatgaaagagaggttgttttgcatttgaatccaat tgcttcgatgcatattcatcagaaaccattggtgttcctcctgaactctcctgtgcctctgacatggaaagtgaaaacag aaagacttgctttggggattcagagacttttcattgtttcagcaggctccacggtgcagtttgtgaaggaagacttctcc ttgacagcaaagagagaagagaaaccccttcctcaaggaaataagcatctgttagagtgggctgaaaaggaatatggagc agtaacgtccttcactgaatttaaaatatccaggaatgtttacataaaagtgggtgaagttcaattttttcctacaacat gcaatatagaaaagaactttatttctttgaactaccttgccggatacctacaaccaaagacagcagagggatgcattatc tctagtgtggcacatgatagagaagttcatataattgaacttattgcacctgattcaaacagcgctttccaggtggatat catcattgacatcagaccatctcagccagacaccacacttgtcagggatcttgtacttattctcaagtgcagaaagtctg tcaactgggtcatcaaatcacatgacgtgcagggaagattggaagccatcacatcaaatggggttggctttggaaaagaa acggaacgctctatggcaatgagtaaaactatagtgtttgatatgccttcctctcatgagaatttaattgcctgggcata tgagcatggctactacccagttactacttatacaaaagcaccccttgctaataagtttcacctacagctcatggatgcag aagaaatgaatgatgaagaagacgatttccttccaccagagctgaaggaactgctgcatggcattaaagccccacgtttg aacgaagacatgcattttggttttcttcatgagaagaaccaaggctccttgccatcaaccgacactgttgacccaatcat ggccagtcatggttttgaacagcttcttccaaaagacccagagccagaagaagtgcagggtagcgttgatgttgccatgt ctgtgatatgtaacgatacatccatgatggtagctgtagcaaaagactcgctggaggctagcggtttcgttgggactcag ctctctctgctagatccgagctgcagagctaaaacaaacaggacccatttcattctggagtcatctttgcgagattgtgg gacccgacagattccctatcctttggataacatcgtctatctcaactctattgttatccaggtgtcaccatcatctgaag ctagtggttggctagttgattatgaagacatggaatcaggggataatggttttcctggggacaccgatgaatcagacatc acctttttcagccggcctgtcattgttgtgttcaattgcacattccatcaaccgagagatccaagggtttccaagttctg gccccctgaaatacatgttggcaatgccacttttggaatggaactctacgagacggagctttttcgtaccccagttcaag gattcttctctgtggcagacaacagccacatttttgtcgagatttctctgacaaaggctgagagatccctgggctttgta atccaaacttgctttatttcaccaaattcctatcctgatcgaatgtcagaatttaccattattgaaaatgtttgtcctaa agatgagtctgtaagattcttcaatgttccgaaagctaattttcctgtcccgaacacacagaccgacaaaaagcgattta gcttcttattcaaatccacattcaacagctctcttctctttctacactgtgaggtgactttatgcacaaagaaagaaaaa gatattccaggattagctcagtgtatccttccagatgaagcgtgcacctttcttaatgttgatatgatctttgcaatgat gcagaataagaaaaccttcaccaaacctcttgctgtgataactaaagggagaccagaagataaatcctcccatttgaatc cttctgaaggatcaccatctgttgtacacggcctggacacgttgacagttgtgggaattgcctttgcagcttttatgata ggcgcgctgctaacaggagctttatggtttatctattcccgcacagatattgacagctgtatgtgccactttccccaaag acgaaaaggtattcacggacactgagttggagcaaaatatatacagattgcagctgataagctgaggagaaccagaagga agacagccggttcccacttcgccaccaccttctgaaaacagcagtgcaggccacagcatgggcagcacacaaagcacccc ctgttccagcagcagcagggcctaacacaggaggcagcatggaaatgcatgcagcaacatcggagatcagaggttcaaaa aaaaaacaacccagctgtttgttgccttttgcttccattggtctggattctttggcaaaaatgagaaggcacttccttct ttttcggctttttccagataaacgtggtcctcgaatctcccgcc |
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| Transcript ID | habu1_s1408_g05035.t2 |
| Definition | - |
>habu1_s1408_g05035.t2 gcaatggcaaaaccatcctgatatgttgtgcgacgtcacatgacgttgcgaaagaagaagaagaagaagaagaagaagaa gaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaaggcggcaaggatctctggagagg aggaggaggaggcgagggagcagcgcgccccgatcctgcgcgagggaagctggccaggcttctcggaagggaatccccgt ttccaagcgtgcgcggtcattaaaaggctggacaactttcaaagcatccccattaatccttttcttaagatcagcgccgc atttgctttgatgattggatgtttagcatttccaggtcctgtgcctaggagtggctgtctattgtctcaggtcaacagtt cacatcctgtccaagccttgctagaaagttttactgtcttatctggctgtgcaagcaaaggaactgctggattgccacaa gaagttcacgtcctcaacgttaggagttcagaagagtctggccaccatgaaagagaggttgttttgcatttgaatccaat tgcttcgatgcatattcatcagaaaccattggtgttcctcctgaactctcctgtgcctctgacatggaaagtgaaaacag aaagacttgctttggggattcagagacttttcattgtttcagcaggctccacggtgcagtttgtgaaggaagacttctcc ttgacagcaaagagagaagagaaaccccttcctcaaggaaataagcatctgttagagtgggctgaaaaggaatatggagc agtaacgtccttcactgaatttaaaatatccaggaatgtttacataaaagtgggtgaagttcaattttttcctacaacat gcaatatagaaaagaactttatttctttgaactaccttgccggatacctacaaccaaagacagcagagggatgcattatc tctagtgtggcacatgatagagaagttcatataattgaacttattgcacctgattcaaacagcgctttccaggtggatat catcattgacatcagaccatctcagccagacaccacacttgtcagggatcttgtacttattctcaagtgcagaaagtctg tcaactgggtcatcaaatcacatgacgtgcagggaagattggaagccatcacatcaaatggggttggctttggaaaagaa acggaacgctctatggcaatgagtaaaactatagtgtttgatatgccttcctctcatgagaatttaattgcctgggcata tgagcatggctactacccagttactacttatacaaaagcaccccttgctaataagtttcacctacagctcatggatgcag aagaaatgaatgatgaagaagacgatttccttccaccagagctgaaggaactgctgcatggcattaaagccccacgtttg aacgaagacatgcattttggttttcttcatgagaagaaccaaggctccttgccatcaaccgacactgttgacccaatcat ggccagtcatggttttgaacagcttcttccaaaagacccagagccagaagaagtgcagggtagcgttgatgttgccatgt ctgtgatatgtaacgatacatccatgatggtagctgtagcaaaagactcgctggaggctagcggtttcgttgggactcag ctctctctgctagatccgagctgcagagctaaaacaaacaggacccatttcattctggagtcatctttgcgagattgtgg gacccgacagattccctatcctttggataacatcgtctatctcaactctattgttatccaggtgtcaccatcatctgaag ctagtggttggctagttgattatgaagacatggaatcaggggataatggttttcctggggacaccgatgaatcagacatc acctttttcagccggcctgtcattgttgtgttcaattgcacattccatcaaccgagagatccaagggtttccaagttctg gccccctgaaatacatgttggcaatgccacttttggaatggaactctacgagacggagctttttcgtaccccagttcaag gattcttctctgtggcagacaacagccacatttttgtcgagatttctctgacaaaggctgagagatccctgggctttgta atccaaacttgctttatttcaccaaattcctatcctgatcgaatgtcagaatttaccattattgaaaatgtttgtcctaa agatgagtctgtaagattcttcaatgttccgaaagctaattttcctgtcccgaacacacagaccgacaaaaagcgattta gcttcttattcaaatccacattcaacagctctcttctctttctacactgtgaggtgactttatgcacaaagaaagaaaaa gatattccaggattagctcagtgtatccttccagatgaagcgtgcacctttcttaatgttgatatgatctttgcaatgat gcagaataagaaaaccttcaccaaacctcttgctgtgataactaaagggagaccagaagataaatcctcccatttgaatc cttctgaaggatcaccatctgttgtacacggcctggacacgttgacagttgtgggaattgcctttgcagcttttatgata ggcgcgctgctaacaggagctttatggtttatctattcccgcacaggagaaccagaaggaagacagccggttcccacttc gccaccaccttctgaaaacagcagtgcaggccacagcatgggcagcacacaaagcaccccctgttccagcagcagcaggg cctaacacaggaggcagcatggaaatgcatgcagcaacatcggagatcagaggttcaaaaaaaaaacaacccagctgttt gttgccttttgcttccattggtctggattctttggcaaaaatgagaaggcacttccttctttttcggctttttccagata aacgtggtcctcgaatctcccgcc |
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Protein
| Protein ID | habu1_s1408_g05035.t1 |
|---|---|
| Definition | - |
>habu1_s1408_g05035.t1 MTLRKKKKKKKKKKKKKKKKKKKKKKKKKKKKKAARISGEEEEEAREQRAPILREGSWPGFSEGNPRFQACAVIKRLDNF QSIPINPFLKISAAFALMIGCLAFPGPVPRSGCLLSQVNSSHPVQALLESFTVLSGCASKGTAGLPQEVHVLNVRSSEES GHHEREVVLHLNPIASMHIHQKPLVFLLNSPVPLTWKVKTERLALGIQRLFIVSAGSTVQFVKEDFSLTAKREEKPLPQG NKHLLEWAEKEYGAVTSFTEFKISRNVYIKVGEVQFFPTTCNIEKNFISLNYLAGYLQPKTAEGCIISSVAHDREVHIIE LIAPDSNSAFQVDIIIDIRPSQPDTTLVRDLVLILKCRKSVNWVIKSHDVQGRLEAITSNGVGFGKETERSMAMSKTIVF DMPSSHENLIAWAYEHGYYPVTTYTKAPLANKFHLQLMDAEEMNDEEDDFLPPELKELLHGIKAPRLNEDMHFGFLHEKN QGSLPSTDTVDPIMASHGFEQLLPKDPEPEEVQGSVDVAMSVICNDTSMMVAVAKDSLEASGFVGTQLSLLDPSCRAKTN RTHFILESSLRDCGTRQIPYPLDNIVYLNSIVIQVSPSSEASGWLVDYEDMESGDNGFPGDTDESDITFFSRPVIVVFNC TFHQPRDPRVSKFWPPEIHVGNATFGMELYETELFRTPVQGFFSVADNSHIFVEISLTKAERSLGFVIQTCFISPNSYPD RMSEFTIIENVCPKDESVRFFNVPKANFPVPNTQTDKKRFSFLFKSTFNSSLLFLHCEVTLCTKKEKDIPGLAQCILPDE ACTFLNVDMIFAMMQNKKTFTKPLAVITKGRPEDKSSHLNPSEGSPSVVHGLDTLTVVGIAFAAFMIGALLTGALWFIYS RTDIDSCMCHFPQRRKGIHGH |
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| Protein ID | habu1_s1408_g05035.t2 |
| Definition | - |
>habu1_s1408_g05035.t2 MTLRKKKKKKKKKKKKKKKKKKKKKKKKKKKKKAARISGEEEEEAREQRAPILREGSWPGFSEGNPRFQACAVIKRLDNF QSIPINPFLKISAAFALMIGCLAFPGPVPRSGCLLSQVNSSHPVQALLESFTVLSGCASKGTAGLPQEVHVLNVRSSEES GHHEREVVLHLNPIASMHIHQKPLVFLLNSPVPLTWKVKTERLALGIQRLFIVSAGSTVQFVKEDFSLTAKREEKPLPQG NKHLLEWAEKEYGAVTSFTEFKISRNVYIKVGEVQFFPTTCNIEKNFISLNYLAGYLQPKTAEGCIISSVAHDREVHIIE LIAPDSNSAFQVDIIIDIRPSQPDTTLVRDLVLILKCRKSVNWVIKSHDVQGRLEAITSNGVGFGKETERSMAMSKTIVF DMPSSHENLIAWAYEHGYYPVTTYTKAPLANKFHLQLMDAEEMNDEEDDFLPPELKELLHGIKAPRLNEDMHFGFLHEKN QGSLPSTDTVDPIMASHGFEQLLPKDPEPEEVQGSVDVAMSVICNDTSMMVAVAKDSLEASGFVGTQLSLLDPSCRAKTN RTHFILESSLRDCGTRQIPYPLDNIVYLNSIVIQVSPSSEASGWLVDYEDMESGDNGFPGDTDESDITFFSRPVIVVFNC TFHQPRDPRVSKFWPPEIHVGNATFGMELYETELFRTPVQGFFSVADNSHIFVEISLTKAERSLGFVIQTCFISPNSYPD RMSEFTIIENVCPKDESVRFFNVPKANFPVPNTQTDKKRFSFLFKSTFNSSLLFLHCEVTLCTKKEKDIPGLAQCILPDE ACTFLNVDMIFAMMQNKKTFTKPLAVITKGRPEDKSSHLNPSEGSPSVVHGLDTLTVVGIAFAAFMIGALLTGALWFIYS RTGEPEGRQPVPTSPPPSENSSAGHSMGSTQSTPCSSSSRA |
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