Gene
| Gene Model ID | habu1_s1408_g05041 |
|---|---|
| Locus | habu1_scaffold1408 : 1357733 ... 1422828 : - |
| To GenomeBrowser | habu1_scaffold1408:1357733..1422828 |
| Genes list of scaffold | habu1_scaffold1408 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| zinc finger protein gfi- partial | GO:0000122 GO:0001078 GO:0007638 GO:0008270 GO:0009996 GO:0010956 GO:0010977 GO:0016363 GO:0016604 GO:0017053 GO:0034121 GO:0042472 GO:0042491 GO:0042660 GO:0044212 GO:0070105 GO:0071222 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s1408_g05041.t1 | 6 | 1 | zf-C2H2 | 200 | 223 | 9.4e-28 | 94.8 | 9.4e-06 | 0.0069 | 16.6 |
| habu1_s1408_g05041.t1 | 5 | 1 | zf-H2C2_2 | 215 | 240 | 7.1e-31 | 104.9 | 2.5e-08 | 1.8e-05 | 24.7 |
| habu1_s1408_g05041.t1 | 6 | 2 | zf-C2H2 | 229 | 251 | 9.4e-28 | 94.8 | 2.5e-06 | 0.0019 | 18.4 |
| habu1_s1408_g05041.t1 | 4 | 1 | zf-C2H2_4 | 229 | 251 | 5.7e-23 | 79.5 | 4.3e-07 | 0.00032 | 20.8 |
| habu1_s1408_g05041.t1 | 5 | 2 | zf-H2C2_2 | 243 | 268 | 7.1e-31 | 104.9 | 2.6e-08 | 2.0e-05 | 24.6 |
| habu1_s1408_g05041.t1 | 6 | 3 | zf-C2H2 | 257 | 279 | 9.4e-28 | 94.8 | 1.2e-08 | 8.9e-06 | 25.7 |
| habu1_s1408_g05041.t1 | 4 | 2 | zf-C2H2_4 | 257 | 279 | 5.7e-23 | 79.5 | 3.2e-06 | 0.0023 | 18.1 |
| habu1_s1408_g05041.t1 | 5 | 3 | zf-H2C2_2 | 272 | 295 | 7.1e-31 | 104.9 | 4.9e-07 | 0.00037 | 20.6 |
| habu1_s1408_g05041.t1 | 6 | 4 | zf-C2H2 | 285 | 307 | 9.4e-28 | 94.8 | 4.4e-06 | 0.0033 | 17.6 |
| habu1_s1408_g05041.t1 | 5 | 4 | zf-H2C2_2 | 300 | 323 | 7.1e-31 | 104.9 | 2.5e-09 | 1.9e-06 | 27.8 |
| habu1_s1408_g05041.t1 | 1 | 1 | zf-C2H2_6 | 312 | 335 | 1.9e-09 | 37.0 | 3.1e-07 | 0.00023 | 20.9 |
| habu1_s1408_g05041.t1 | 6 | 5 | zf-C2H2 | 313 | 335 | 9.4e-28 | 94.8 | 3.8e-08 | 2.8e-05 | 24.1 |
| habu1_s1408_g05041.t1 | 4 | 3 | zf-C2H2_4 | 313 | 335 | 5.7e-23 | 79.5 | 4.9e-06 | 0.0037 | 17.5 |
| habu1_s1408_g05041.t1 | 5 | 5 | zf-H2C2_2 | 327 | 350 | 7.1e-31 | 104.9 | 3.9e-08 | 2.9e-05 | 24.1 |
| habu1_s1408_g05041.t1 | 6 | 6 | zf-C2H2 | 341 | 364 | 9.4e-28 | 94.8 | 6.2e-06 | 0.0046 | 17.2 |
| habu1_s1408_g05041.t1 | 4 | 4 | zf-C2H2_4 | 343 | 364 | 5.7e-23 | 79.5 | 8.0e-06 | 0.0059 | 16.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s1408_g05041.t1 | gi|602649070|ref|XP_007430946.1| | PREDICTED: zinc finger protein Gfi-1, partial [Python bivittatus] | 0.0 |
| habu1_s1408_g05041.t1 | gi|699575329|ref|XP_009876052.1| | PREDICTED: zinc finger protein Gfi-1, partial [Apaloderma vittatum] | 0.0 |
| habu1_s1408_g05041.t1 | gi|700353742|ref|XP_009921123.1| | PREDICTED: zinc finger protein Gfi-1, partial [Haliaeetus albicilla] | 0.0 |
| habu1_s1408_g05041.t1 | gi|514775560|ref|XP_005026620.1| | PREDICTED: zinc finger protein Gfi-1, partial [Anas platyrhynchos] | 0.0 |
| habu1_s1408_g05041.t1 | gi|327270731|ref|XP_003220142.1| | PREDICTED: zinc finger protein Gfi-1 [Anolis carolinensis] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 0.2 |
| Venom grand-1 | 0.1 |
| Pit, infrared sensing | 0.1 |
| Nose | 0.2 |
| Brain-1 | 0.0 |
| Eye | 0.3 |
| fetal fibroblast | 0.0 |
| venom gland-2 | 0.0 |
| Brain-2 | 0.0 |
| Spleen | 2.1 |
| Lung | 0.0 |
| Liver | 0.0 |
| Kidney | 0.1 |
| Pancreas | 4.8 |
| Small intestine | 0.4 |
| Large intestine | 0.8 |
| Stomach | 0.0 |
| heart | 0.1 |
| ovary | 1.1 |
| cheek muscle | 0.1 |
Transcript
| Transcript ID | habu1_s1408_g05041.t1 |
|---|---|
| Definition | - |
>habu1_s1408_g05041.t1 gcacctctgattgctctcaaggtttctatcccatttgcatgtaatcatataactacagctttcctcacaacctaactaag gcccctattaagataaacaacctcttatacaccagagcccaaaaactagatatgtaaaaacttattgactaaagccatgc tgggtggcagttttcaattatctatgggccagctgttgaaactagatttagctatttgccatgtgtttccatcggccgtc ctgtacggcaagtataaaaagactccattggcagaaagactctgctcctgtggctcaggagaggtggagaccgttggaca catactccttcgatgttccttctataaagctattaggaaaaaacatatcctccccataattgcttctgagcgctccatct gtccatccttggatgaaccctcccacttctccttgcccctgaaaccctacacatggagcagcctgggaaatactgaactg agacatttggtacagaactgcaggccttgctcaactctggaacgtggcctcttctgtgagcggggatctgagcctgttct gtatgcctcagagcgcaactcagctcttggactctatggtgactttggctctcctggactctttgagcggccagtggcag cccctgggatctttgtggagaccccacctagactgcaaccggagaagagtgtaaagagcatcaaattggaatcggaactc ctctgtcgccctctgttgctcagcagtggctcctacaaatgcatcaaatgcagcaaggacttctctactccgcatggcct agaggtgcatgttcgtcgttcacacagtggcacccggcccttcgcttgcgaaatgtgtggaaagacatttggccacgctg ttagcttggagcagcataaagctgtgcactcccaggaacgtagctttgactgtaagatctgtgggaagagcttcaagaga tcttccactttgtccacacaccttctcatccactcagatacccggccttatccatgtcagtactgtggaaagaggttcca ccagaaatctgacatgaagaagcatactttcatccatacaggtgagaaaccccacaagtgccaggtgtgtggcaaagctt tcagccagagctcaaacctgatcactcacagtcggaaacacactggcttcaagccctttggctgtgatctgtgcggcaaa ggctttcagagaaaagtggatttgcgaagacaccgagagacacagcatgataagaacgaatccaactgtaaaacatgaca cagaagatcgtggtaaagcaaggatttacactggcttattcgttggattgttttgaatttttttttctccctgtgcttct aaaggcagcgtgcccttaccaactaattttcggcagacgtatgctggagaattacaggttttttttttttaatgtgctca accccagaatccaactgtgcttccttaaaaccagtgggaataaagttggttaaattccttgttttt |
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Protein
| Protein ID | habu1_s1408_g05041.t1 |
|---|---|
| Definition | - |
>habu1_s1408_g05041.t1 MLGGSFQLSMGQLLKLDLAICHVFPSAVLYGKYKKTPLAERLCSCGSGEVETVGHILLRCSFYKAIRKKHILPIIASERS ICPSLDEPSHFSLPLKPYTWSSLGNTELRHLVQNCRPCSTLERGLFCERGSEPVLYASERNSALGLYGDFGSPGLFERPV AAPGIFVETPPRLQPEKSVKSIKLESELLCRPLLLSSGSYKCIKCSKDFSTPHGLEVHVRRSHSGTRPFACEMCGKTFGH AVSLEQHKAVHSQERSFDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVCGK AFSQSSNLITHSRKHTGFKPFGCDLCGKGFQRKVDLRRHRETQHDKNESNCKT |
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