Gene
| Gene Model ID | habu1_s1408_g05043 |
|---|---|
| Locus | habu1_scaffold1408 : 1511389 ... 1522235 : + |
| To GenomeBrowser | habu1_scaffold1408:1511389..1522235 |
| Genes list of scaffold | habu1_scaffold1408 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| 60s ribosomal protein l5 | GO:0003735 GO:0005840 GO:0006412 GO:0008097 GO:0042254 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s1408_g05043.t1 | 1 | 1 | Ribosomal_L18p | 26 | 173 | 1.4013e-45 | 154.5 | 0.0 | 1.4013e-45 | 154.5 |
| habu1_s1408_g05043.t1 | 1 | 1 | Ribosomal_L18_c | 192 | 283 | 4.8e-36 | 123.1 | 2.7e-39 | 1.0e-35 | 122.1 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s1408_g05043.t1 | gi|602663883|ref|XP_007437567.1| | PREDICTED: 60S ribosomal protein L5 [Python bivittatus] | 0.0 |
| habu1_s1408_g05043.t1 | gi|327270707|ref|XP_003220130.1| | PREDICTED: 60S ribosomal protein L5 [Anolis carolinensis] | 0.0 |
| habu1_s1408_g05043.t1 | gi|591368197|ref|XP_007058944.1| | PREDICTED: 60S ribosomal protein L5 isoform X2 [Chelonia mydas] | 0.0 |
| habu1_s1408_g05043.t1 | gi|591368195|ref|XP_007058943.1| | PREDICTED: 60S ribosomal protein L5 isoform X1 [Chelonia mydas] | 0.0 |
| habu1_s1408_g05043.t1 | gi|530616922|ref|XP_005298201.1| | PREDICTED: 60S ribosomal protein L5 [Chrysemys picta bellii] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 568.9 |
| Venom grand-1 | 2968.7 |
| Pit, infrared sensing | 1010.9 |
| Nose | 609.0 |
| Brain-1 | 156.0 |
| Eye | 689.3 |
| fetal fibroblast | 665.8 |
| venom gland-2 | 2217.9 |
| Brain-2 | 135.7 |
| Spleen | 1101.1 |
| Lung | 907.1 |
| Liver | 1887.7 |
| Kidney | 1500.2 |
| Pancreas | 1749.4 |
| Small intestine | 1635.7 |
| Large intestine | 1120.3 |
| Stomach | 1702.1 |
| heart | 926.1 |
| ovary | 192.1 |
| cheek muscle | 1234.1 |
Transcript
| Transcript ID | habu1_s1408_g05043.t1 |
|---|---|
| Definition | - |
>habu1_s1408_g05043.t1 ggcggccctcggcctaaaacgaaacgggatacaagcggcaatcatggggtttgtcaaagttgtcaagaataaggcctact ttaagaggtaccaagtcaagttccgaagaaggagagagggaaagactgattactatgctcgtaagcgcttggtgattcaa gataaaaacaagtacaacactcctaaatacaggatgattgtacgtgtcaccaacagagatatcatttgccagattgcata tgcccgaattgaaggcgacatgattgtctgtgctgcatactctcacgagttaccaaagtatggtgtgaaagtaggcttga ccaactatgctgctgcttattgcacgggcttgctgatggcccgcaggcttctgaataaatttggtctcgataagatctac gaaggccaagttgaagtgactggtgatgaatacaatgtggaaagtgtggatggacagcctggtgcctttacttgttatct ggatgctggtctcgctcggacgactacgggaaacaaagtctttggtgctctaaaaggagctgtggatggtggtctttcca ttccacatagtaccaagcgtttccctggttatgactcagagagcaaagaattcaatgcagaagtccaccgcaagcatatc atgggccaaaacgttgcagattacatgcgatacctgatggaagaagacgaagatgcttataaaaaacagttctctcagta tatcaagaacaatgtaacacctgacatgatggaagaaatgtatagaaaagcgcatgctgcaatacgtgaaaaccctgccc acgaaaagaaacctaagagagaagttaaaaagaagaggtggaaccgtcctaaattgtcccttgctcagaagaaagatcgt gtggctcaaaagaaagctagcttccttcgggcccaggaacgtgtggctgatagttaagatgccttccataattttctgtg aagattttggaatacagaataaacttattgaatcaatgttgtaag |
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Protein
| Protein ID | habu1_s1408_g05043.t1 |
|---|---|
| Definition | - |
>habu1_s1408_g05043.t1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYS HELPKYGVKVGLTNYAAAYCTGLLMARRLLNKFGLDKIYEGQVEVTGDEYNVESVDGQPGAFTCYLDAGLARTTTGNKVF GALKGAVDGGLSIPHSTKRFPGYDSESKEFNAEVHRKHIMGQNVADYMRYLMEEDEDAYKKQFSQYIKNNVTPDMMEEMY RKAHAAIRENPAHEKKPKREVKKKRWNRPKLSLAQKKDRVAQKKASFLRAQERVADS |
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