Gene
| Gene Model ID | habu1_s1419_g05088 |
|---|---|
| Locus | habu1_scaffold1419 : 127816 ... 129493 : + |
| To GenomeBrowser | habu1_scaffold1419:127816..129493 |
| Genes list of scaffold | habu1_scaffold1419 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| eukaryotic translation initiation factor 1 | GO:0003735 GO:0003743 GO:0005840 GO:0006446 GO:0042254 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s1419_g05088.t1 | 1 | 1 | SUI1 | 25 | 103 | 5.7e-30 | 102.9 | 1.3e-33 | 6.6e-30 | 102.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s1419_g05088.t1 | gi|731495957|ref|XP_010592924.1| | PREDICTED: eukaryotic translation initiation factor 1 [Loxodonta africana] | 0.0 |
| habu1_s1419_g05088.t1 | gi|733923368|ref|XP_010723031.1| | PREDICTED: eukaryotic translation initiation factor 1 [Meleagris gallopavo] | 0.0 |
| habu1_s1419_g05088.t1 | gi|557319368|ref|XP_006032855.1| | PREDICTED: eukaryotic translation initiation factor 1 [Alligator sinensis] | 0.0 |
| habu1_s1419_g05088.t1 | gi|556757254|ref|XP_005973972.1| | PREDICTED: eukaryotic translation initiation factor 1-like [Pantholops hodgsonii] | 0.0 |
| habu1_s1419_g05088.t1 | gi|541971328|ref|XP_005439417.1| | PREDICTED: eukaryotic translation initiation factor 1 [Falco cherrug] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 283.0 |
| Venom grand-1 | 1029.8 |
| Pit, infrared sensing | 402.0 |
| Nose | 219.8 |
| Brain-1 | 129.6 |
| Eye | 402.3 |
| fetal fibroblast | 274.9 |
| venom gland-2 | 390.4 |
| Brain-2 | 106.4 |
| Spleen | 363.9 |
| Lung | 572.7 |
| Liver | 954.0 |
| Kidney | 1321.1 |
| Pancreas | 1159.5 |
| Small intestine | 585.9 |
| Large intestine | 396.4 |
| Stomach | 555.8 |
| heart | 359.1 |
| ovary | 218.3 |
| cheek muscle | 870.5 |
Transcript
| Transcript ID | habu1_s1419_g05088.t1 |
|---|---|
| Definition | - |
>habu1_s1419_g05088.t1 nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnatttcattggtcgaacccaagataggaaggaagccagctattc caagtttggccccgggaggggggaaacaggcgcctctggcctagcttggcctaaaatgcgcctcctagaagggataggaa acgaggagaggcgcccgaaagatggatactgataactatcgggatgaatatccctttgctgatgcaagtaagggtgatga cttacttcctgctgggactgaggactacatccatataaggatccagcagaggaacggcagaaaaaccctcaccacagtcc aaggcattgccgatgattatgataaaaagaaactggtgaaggccttcaagaagaaatttgcctgcaatggtactgtgatt gagcatccagagtatggagaagtgattcagcttcaaggggaccaacggaagaatatatgccaattcctcattgagattgg actggctaaagacgaccagctgaaagtccatgggttttaaattttgtggctcaccaaagtttcaagggcgatgacttccc tgcgatgaaagattctttgtgtcctgcctcattagttttaaccaagccagcttgcataatgtaatcacatcaggttccct ttagtctggactagtgtaacttggcaatgtaataaactgacaagatctgtgttgtgtt |
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Protein
| Protein ID | habu1_s1419_g05088.t1 |
|---|---|
| Definition | - |
>habu1_s1419_g05088.t1 MDTDNYRDEYPFADASKGDDLLPAGTEDYIHIRIQQRNGRKTLTTVQGIADDYDKKKLVKAFKKKFACNGTVIEHPEYGE VIQLQGDQRKNICQFLIEIGLAKDDQLKVHGF |
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