Gene
| Gene Model ID | habu1_s1426_g05100 |
|---|---|
| Locus | habu1_scaffold1426 : 37557 ... 47165 : - |
| To GenomeBrowser | habu1_scaffold1426:37557..47165 |
| Genes list of scaffold | habu1_scaffold1426 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| trna (cytidine guanosine -2 -o)-methyltransferase-like isoform x1 | GO:0002128 GO:0002181 GO:0005737 GO:0008175 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s1426_g05100.t1 | 1 | 1 | FtsJ | 21 | 203 | 0.0 | 219.3 | 0.0 | 0.0 | 219.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s1426_g05100.t1 | gi|602644640|ref|XP_007428771.1| | PREDICTED: putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase-like isoform X1 [Python bivittatus] | 0.0 |
| habu1_s1426_g05100.t1 | gi|637341566|ref|XP_008116575.1| | PREDICTED: putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase [Anolis carolinensis] | 0.0 |
| habu1_s1426_g05100.t1 | gi|573874693|ref|XP_006625717.1| | PREDICTED: putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase-like [Lepisosteus oculatus] | 0.0 |
| habu1_s1426_g05100.t1 | gi|62857467|ref|NP_001016817.1| | FtsJ RNA methyltransferase homolog 1 [Xenopus (Silurana) tropicalis] | 0.0 |
| habu1_s1426_g05100.t1 | gi|602644643|ref|XP_007428772.1| | PREDICTED: putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase-like isoform X2 [Python bivittatus] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 3.6 |
| Venom grand-1 | 4.2 |
| Pit, infrared sensing | 3.9 |
| Nose | 4.6 |
| Brain-1 | 5.5 |
| Eye | 3.2 |
| fetal fibroblast | 8.3 |
| venom gland-2 | 12.0 |
| Brain-2 | 5.1 |
| Spleen | 4.0 |
| Lung | 4.3 |
| Liver | 2.5 |
| Kidney | 3.4 |
| Pancreas | 1.2 |
| Small intestine | 3.1 |
| Large intestine | 2.9 |
| Stomach | 1.8 |
| heart | 4.1 |
| ovary | 5.5 |
| cheek muscle | 3.3 |
Transcript
| Transcript ID | habu1_s1426_g05100.t1 |
|---|---|
| Definition | - |
>habu1_s1426_g05100.t1 tgtggtgtaaattgcattcgaaatccggaggtattttaagagttaccgcagtcaccagccacatctaagggaaaatggga cgctcctccaaagacaaacgtgatatttactaccgtctggccaaggaagaagggtggcgagctcgtagtgcattcaaact tctgcagctggatgaagaatatcacttatttaaaggtgtctcccgggctgtagatctttgtgcagcacctggtagctgga gtcaagttctcagccgaaagctcaaaggagaagatcccaaaaatgcagatatcaaaatagtggcagtagatttgcaagcc atggctccattgccaggagtcattcaaatccaaggggacatcaccaaggtttcaacagctcaggaaatcattcatcattt tgaggggcaaccagccgatctggttgtgtgtgatggagcccctgatgtgactggactccatgatatagatgagtacatcc aagcccaactgttgcttgctgccttgaacattactacgcatgtcttaaagaaaggggggacatttgtagctaagatattc cgagggaaggatgtcactcttctctattcccagttgaatatattcttccctgatgtgacatgtgccaaaccccgaagtag tcgcaactctagcattgaagcctttgctgtttgccgaaactatagtccccctgaagattatgtgccaaacatgtccaatc ccctattggatcattgttacgatgtggattttaatcagctggagggtcccaatcggatcattgtccctttcctggcttgt ggcgatctgagtgcttacgattccgatcggacctacccgctacagctggatcctgagaaggagtatacctacgtgccccc gacccagccgcctatccgtcctgcctacgaagaagcctgcttcttaaagaaacacaacctccttaccaaggaacaagggc cccaccctcagctttcagtgccgggggcttcaaattttcctccagagactgaggtcgtagatgccctggaggaactgtca gtgtaacacaaccacatgactcggggagcgaaaaatatgaccctgtgccaggttgaaagactacattttatcttctgcag gagcaaagatagaaaagatgagcttgtctggagagttggacctttgaggatgcttgttctcagggcacattagtactaca acaggccttcggagtcatactgaaatgcaaaagaactttgcccttccaatatatacacataatcctagacaacct |
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Protein
| Protein ID | habu1_s1426_g05100.t1 |
|---|---|
| Definition | - |
>habu1_s1426_g05100.t1 MGRSSKDKRDIYYRLAKEEGWRARSAFKLLQLDEEYHLFKGVSRAVDLCAAPGSWSQVLSRKLKGEDPKNADIKIVAVDL QAMAPLPGVIQIQGDITKVSTAQEIIHHFEGQPADLVVCDGAPDVTGLHDIDEYIQAQLLLAALNITTHVLKKGGTFVAK IFRGKDVTLLYSQLNIFFPDVTCAKPRSSRNSSIEAFAVCRNYSPPEDYVPNMSNPLLDHCYDVDFNQLEGPNRIIVPFL ACGDLSAYDSDRTYPLQLDPEKEYTYVPPTQPPIRPAYEEACFLKKHNLLTKEQGPHPQLSVPGASNFPPETEVVDALEE LSV |
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