Gene
| Gene Model ID | habu1_s1426_g05103 |
|---|---|
| Locus | habu1_scaffold1426 : 76186 ... 82905 : + |
| To GenomeBrowser | habu1_scaffold1426:76186..82905 |
| Genes list of scaffold | habu1_scaffold1426 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s1426_g05103.t1 | 1 | 1 | PRA1 | 17 | 171 | 9.7e-36 | 122.4 | 3.8e-39 | 1.1e-35 | 122.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s1426_g05103.t1 | gi|602644636|ref|XP_007428769.1| | PREDICTED: PRA1 family protein 2 [Python bivittatus] | 0.0 |
| habu1_s1426_g05103.t1 | gi|637341582|ref|XP_003225847.2| | PREDICTED: PRA1 family protein 2 [Anolis carolinensis] | 0.0 |
| habu1_s1426_g05103.t1 | gi|557026986|ref|XP_006013594.1| | PREDICTED: PRA1 family protein 3-like [Latimeria chalumnae] | 0.0 |
| habu1_s1426_g05103.t1 | gi|505793759|ref|XP_004606504.1| | PREDICTED: PRA1 family protein 2 [Sorex araneus] | 0.0 |
| habu1_s1426_g05103.t1 | gi|548453883|ref|XP_005747363.1| | PREDICTED: PRA1 family protein 3-like [Pundamilia nyererei] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 7.1 |
| Venom grand-1 | 2.2 |
| Pit, infrared sensing | 8.1 |
| Nose | 6.0 |
| Brain-1 | 5.2 |
| Eye | 3.2 |
| fetal fibroblast | 14.5 |
| venom gland-2 | 4.5 |
| Brain-2 | 5.0 |
| Spleen | 3.5 |
| Lung | 7.8 |
| Liver | 4.2 |
| Kidney | 2.8 |
| Pancreas | 5.6 |
| Small intestine | 3.3 |
| Large intestine | 4.9 |
| Stomach | 3.9 |
| heart | 2.8 |
| ovary | 14.7 |
| cheek muscle | 1.1 |
Transcript
| Transcript ID | habu1_s1426_g05103.t1 |
|---|---|
| Definition | - |
>habu1_s1426_g05103.t1 cggcaggctgtggctgctgatggacactgttggcccccatgtgcttgctggcctctctgtgcgggggccgatggtgtcag aaagcagccaccccggctcttcctttgccttgccttgtggcaatggcaccctcaccctgtctcgccttgccttagcccgc aggacgagcctcctgcccaccaccccacctgccagagacctccctggatctcccccaaccctgcccgttccccacaggcg tccctccccacgagcaacatcgaggtctatcgccgcaatgcattgtggggatggtagttcctcccgccccgagcgagcga aaatgtccgaggtgcggctgcccccaattcggaggctggatgattttctcctgggctccactcgcttggctgcccccgac gtgcgggacctgcagcgctggcacaatcgcgtggttaacaacctcctgtactaccagagcaattacctgctgctgctggg cgcggggctgctgctgggcgggtacttccagcccatgctgattctgctaagctgcctactcctgtgtctgctctttggag gttttgtctgggcagctgagaacaagcctcccatgcgacgcttccggcggaattaccctggcctgtgtttctttgccgtc cttggtgctgtgtatttcctggtgtctcttttcgaagggtctgccaccttcttgatcttcatcgctctgcccataatgtt gagcctcatccatgcctccctgcgtctgcggaacattaaaaacaagattgagaacaaaatcgagaacattggacttaagc gcacgccgatggggctgctcctggaagctgtgggccaagaacaagaggctggatcctagaccatcagcattggtttccct ttcctctggaactgctctctttccttccaacagatgcctctgctgcttgtttctctgcttgcctccatctagcaacctgg ccgttgagttcctgcggaagatacagttgcctccagcttacaccaaactcagcagaactcctggcctgccgctgagagga aatggactgaaatcagcctaacgttccagtttaatgttaagtattccccatcggaatccatattgttttgctttggaaag gaaagaatcacaatgaaagaaaactataatttaaaaaaaaaaactcagtagtaaattgttggtttagaattcatagt |
|
Protein
| Protein ID | habu1_s1426_g05103.t1 |
|---|---|
| Definition | - |
>habu1_s1426_g05103.t1 MHCGDGSSSRPERAKMSEVRLPPIRRLDDFLLGSTRLAAPDVRDLQRWHNRVVNNLLYYQSNYLLLLGAGLLLGGYFQPM LILLSCLLLCLLFGGFVWAAENKPPMRRFRRNYPGLCFFAVLGAVYFLVSLFEGSATFLIFIALPIMLSLIHASLRLRNI KNKIENKIENIGLKRTPMGLLLEAVGQEQEAGS |
|