Gene
| Gene Model ID | habu1_s1426_g05107 |
|---|---|
| Locus | habu1_scaffold1426 : 269236 ... 325072 : + |
| To GenomeBrowser | habu1_scaffold1426:269236..325072 |
| Genes list of scaffold | habu1_scaffold1426 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| potassium voltage-gated channel subfamily d member partial | GO:0005244 GO:0005267 GO:0006813 GO:0016021 GO:0034220 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s1426_g05107.t1 | 1 | 1 | BTB_2 | 37 | 125 | 4.3e-30 | 103.7 | 3.5e-33 | 8.6e-30 | 102.7 |
| habu1_s1426_g05107.t1 | 1 | 1 | Ion_trans | 225 | 399 | 5.3e-30 | 104.1 | 2.1e-33 | 5.3e-30 | 104.1 |
| habu1_s1426_g05107.t1 | 1 | 1 | Ion_trans_2 | 326 | 401 | 1.4e-12 | 47.1 | 5.8e-16 | 1.4e-12 | 47.1 |
| habu1_s1426_g05107.t1 | 1 | 1 | DUF3399 | 440 | 541 | 2.3e-28 | 98.4 | 1.9e-31 | 4.8e-28 | 97.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s1426_g05107.t1 | gi|602644645|ref|XP_007428773.1| | PREDICTED: potassium voltage-gated channel subfamily D member 1, partial [Python bivittatus] | 0.0 |
| habu1_s1426_g05107.t1 | gi|557008852|ref|XP_006005474.1| | PREDICTED: potassium voltage-gated channel subfamily D member 1-like [Latimeria chalumnae] | 0.0 |
| habu1_s1426_g05107.t1 | gi|573873811|ref|XP_006625346.1| | PREDICTED: potassium voltage-gated channel subfamily D member 1-like isoform X1 [Lepisosteus oculatus] | 0.0 |
| habu1_s1426_g05107.t1 | gi|573873814|ref|XP_006625347.1| | PREDICTED: potassium voltage-gated channel subfamily D member 1-like isoform X2 [Lepisosteus oculatus] | 0.0 |
| habu1_s1426_g05107.t1 | gi|586492558|ref|XP_006876731.1| | PREDICTED: potassium voltage-gated channel subfamily D member 1 [Chrysochloris asiatica] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 0.1 |
| Venom grand-1 | 0.0 |
| Pit, infrared sensing | 0.0 |
| Nose | 0.0 |
| Brain-1 | 1.1 |
| Eye | 0.2 |
| fetal fibroblast | 0.0 |
| venom gland-2 | 0.0 |
| Brain-2 | 1.3 |
| Spleen | 0.0 |
| Lung | 0.0 |
| Liver | 0.0 |
| Kidney | 0.0 |
| Pancreas | 0.0 |
| Small intestine | 0.1 |
| Large intestine | 0.0 |
| Stomach | 0.0 |
| heart | 0.0 |
| ovary | 0.3 |
| cheek muscle | 0.0 |
Transcript
| Transcript ID | habu1_s1426_g05107.t1 |
|---|---|
| Definition | - |
>habu1_s1426_g05107.t1 tgggggcggctcggcacctcctgacccgaatcccattatcacccaccgggatttgcggtggtcaggctactgcctgcttc tcggacaatctctgggcaatgtgtgtcctctctaaaggtgaagcagctgtgggctggctcccactggccaagaagcctat gcccaagcctcctctggaccagaaacgccgccatgatgaaatcttagtggtcaacgttagtggaaaacgcttccaaacgt ggaagaatacccttgaccgttatccagacaccttattaggcagttccgagaaggaattcttttttgacgaagacagcaag gaatatttctttgatcgtgacccagagatgtttcggcacattctcaacttctatcgtaccggcagactccattacccccg ccaagagtgcatacaggcctttgatgaagagctgtccttttatggaatcatcccagagctgattggtgactgctgcttgg aggaataccgagatcgcaagaaggagaatgcagagcgcctagctgaggacgaagaagccgagattgccacggacacttcc ttgccgccagatagcacattccgccaacagctctggagagcatttgagaacccccacaccagcaccatggctttggtctt ctactatgtgactggtttcttcattgccgtctcagtcattgccaacgtggtggagacaatcccgtgccggccgcctcctg gaacgaagaggagcatgtcctgcggagatcgtttccccagagctttcttctgcatggacacggcttgtgtcctcatcttc acctttgagtatctcatgcggctttttgctgccccgagtcgatttaagttcatgaagagtgtgatgagtatcattgacgt tgtggccatcatgccttattacattgggctggtgatgccagaaaacgagaatgtctctggggcctttgtgaccctgagag tcttccgtgtcttccgcatcttcaagttctcgcgccactcgcagggcctaaggatcctgggctatacgcttaagagctgt gcctctgaattgggcttccttctcttctccctcactatggctatcatcatctttgctacggttatgttctatgctgaaaa gagcacaacggagaccaacttcaccagcatccctgctgccttctggtacactatcgtcaccatgaccacacttggctacg gcgacatggttccaagcaccattgcagggaagatctttggatccatctgctctctaagtggggtgctggtcatcgccctt cctgtacctgtcattgtttccaacttcagccgtatctaccaccagaatcagagggcagataagcgacgagctcagcagaa agttcgcctgacccgaatacgactggccaagagtggcactaccaacgcttttcttcgatacaagcagagtggaggccttg gggacagagatcccgatgcacatgccttggcagtgcgcaaccgatcagcttttgaacaacagcaccaccatctcttgcac tgcttggaaaaaactacaagtcatgagtttaccgatgaacactcctacagtgatttctgtctgactgagcccctgggtta ccgcaccagccgcagcacctctctctcctctcagcaaggaagcaaagggattctaagcacctcctgctgcccccgccgca acaggcgccgcaccacccgcctcaccaactccaccatgtctgtgagccgcgccagtgcccaagagctggatatgttgaac agccagaaaagtgctgccccccagagccgttccaacttgaatgccaaaacccatgacaacttgaagctgaactgtgacac cactgacttcacagcagccattatctgcatccccactcctcctgccaacacaccagatgacagtcagtctccgtcacctc gaggccctggtggacccgtgcgcaattccagcctttcccctccgtaccttcttcacgagactgtcaagatctcctccttg taagaggaggctggggtggggtcgggggaactggaaattcaacaatagttttaagtacaaatgcttgaaaaagacaatgc agacaggtcaggaacagaatataatttgttcattttcctgaaatctcttctgtttttttttccataaatggtgctatcag gcattctgggaataaagcagcccaactgcacaatgaaa |
|
Protein
| Protein ID | habu1_s1426_g05107.t1 |
|---|---|
| Definition | - |
>habu1_s1426_g05107.t1 MCVLSKGEAAVGWLPLAKKPMPKPPLDQKRRHDEILVVNVSGKRFQTWKNTLDRYPDTLLGSSEKEFFFDEDSKEYFFDR DPEMFRHILNFYRTGRLHYPRQECIQAFDEELSFYGIIPELIGDCCLEEYRDRKKENAERLAEDEEAEIATDTSLPPDST FRQQLWRAFENPHTSTMALVFYYVTGFFIAVSVIANVVETIPCRPPPGTKRSMSCGDRFPRAFFCMDTACVLIFTFEYLM RLFAAPSRFKFMKSVMSIIDVVAIMPYYIGLVMPENENVSGAFVTLRVFRVFRIFKFSRHSQGLRILGYTLKSCASELGF LLFSLTMAIIIFATVMFYAEKSTTETNFTSIPAAFWYTIVTMTTLGYGDMVPSTIAGKIFGSICSLSGVLVIALPVPVIV SNFSRIYHQNQRADKRRAQQKVRLTRIRLAKSGTTNAFLRYKQSGGLGDRDPDAHALAVRNRSAFEQQHHHLLHCLEKTT SHEFTDEHSYSDFCLTEPLGYRTSRSTSLSSQQGSKGILSTSCCPRRNRRRTTRLTNSTMSVSRASAQELDMLNSQKSAA PQSRSNLNAKTHDNLKLNCDTTDFTAAIICIPTPPANTPDDSQSPSPRGPGGPVRNSSLSPPYLLHETVKISSL |
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