Protobothrops flavoviridis ver. 1.0

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDhabu1_s1426_g05108
Locus habu1_scaffold1426 : 331026 ... 383440 : +
To GenomeBrowser habu1_scaffold1426:331026..383440
Genes list of scaffold habu1_scaffold1426

Annotation by Blast2GO
Annotation GO
otu domain-containing protein 5 isoform x2 GO:0006508 GO:0008234

Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
habu1_s1426_g05108.t3 1 1 OTU 30 140 2.4e-20 73.3 3.3e-24 2.4e-20 73.3

Expression profile
Libraries FPKM
>Adult
Venom fang forming tissue 8.0
Venom grand-1 6.0
Pit, infrared sensing 8.5
Nose 6.4
Brain-1 5.5
Eye 8.5
fetal fibroblast 11.0
venom gland-2 6.3
Brain-2 4.9
Spleen 7.3
Lung 9.3
Liver 14.7
Kidney 20.5
Pancreas 12.2
Small intestine 9.0
Large intestine 7.3
Stomach 7.0
heart 8.3
ovary 38.9
cheek muscle 11.8

Transcript
Transcript IDhabu1_s1426_g05108.t1
Definition-
>habu1_s1426_g05108.t1
cggggcctgggggagggggaggcaatagtcccgaggaagatgaggtcggcgccggctacaacagcgaagatgagtacgag
acggcggcagcccgcatcgagagcatggacccggccaccgtcgagcagcaggaacacaggttcgagaaggcgctgagaga
gaagaaagggttcatcataaaacagatgaaggaagatggggcctgcttgttccgggctgtggctgaccaggtatacggtg
accaagacatgcacgaagtggtcaggaagcactgcatggactacttgatgaagaatgccgactacttttccaattacgtg
acggaggatttcaccacttacattaaccgcaagcggaaaaacaactgtcatggcaaccacattgagatgcaggctatggc
agagatgtacaaccgacctgtggaggtttaccagtatggcacagagcccatcaatactttccatggcatccatcagaatg
aggatgagcccatccgggtgagctatcaccgcaacatacattacaactccgtggtgaaccccaacaaggctaccattggg
gtgggactagggctgccctccttcaagccagggtatgcagagcagtccttgatgaagaatgccatcaagacctcggagga
gtcctggatcgagcagcagatgctggaggataaaaagcgagcgaccgactgggaagccaccaacgaggctatcgaagaac
aggttgccagagagtcttatttgcagtggctgcgtgaccaggaaaagcaggccagacagccccgcaaagccagtgctact
tgcagctctgccacggcggccgcagcgagcggtttggaagaatggagtggtcgttccccacgtcaacgcagctcagcttc
ttccccggaacaccccgagctgcacaacgagctgaatgctgccaagcccccttctcctggaagcaccgcagccctagcac
ttaccaagcccccctcgccatgtgctccaggtctgagtgactgggatgacgatgagatcctggcttcggtgctggccgtt
tcgcaacaggagtacttggaaagcatgaagaaaggtgccctgcaccgagacagtggttctgacaagagttgatacctggt
tccggctcttgcgctcgcctgacacccctttggtgtgcatgttttggcaggaaggatgataacacttggaacccctcccc
tcctccactgctgctgatcaacgctccttcagctgcccctttgctccccacttttggctctccgcagaagactcccccct
ctggtgcgctgagaaacagacaggtgcaaaagagagacaggatctcttccccaaggagctgaaacactcacaaactgggg
catgctgggcttccccttcatctgccgtttttcattattaaaagaaataattgaactggtcctc
Transcript IDhabu1_s1426_g05108.t2
Definition-
>habu1_s1426_g05108.t2
cggggcctgggggagggggaggcaatagtcccgaggaagatgaggtcggcgccggctacaacagcgaagatgagtacgag
acggcggcagcccgcatcgagagcatggacccggccaccgtcgagcagcaggaacacaggttcgagaaggcgctgagaga
gaagaaagggttcatcataaaacagatgaaggaagatggggcctgcttgttccgggctgtggctgaccaggtatacggtg
accaagacatgcacgaagtggtcaggaagcactgcatggactacttgatgaagaatgccgactacttttccaattacgtg
acggaggatttcaccacttacattaaccgcaagcggaaaaacaactgtcatggcaaccacattgagatgcaggctatggc
agagatgtacaaccgacctgtggaggtttaccagtatggcacagagcccatcaatactttccatggcatccatcagaatg
aggatgagcccatccggtatgcagagcagtccttgatgaagaatgccatcaagacctcggaggagtcctggatcgagcag
cagatgctggaggataaaaagcgagcgaccgactgggaagccaccaacgaggctatcgaagaacaggttgccagagagtc
ttatttgcagtggctgcgtgaccaggaaaagcaggccagacagccccgcaaagccagtgctacttgcagctctgccacgg
cggccgcagcgagcggtttggaagaatggagtggtcgttccccacgtcaacgcagctcagcttcttccccggaacacccc
gagctgcacaacgagctgaatgctgccaagcccccttctcctggaagcaccgcagccctagcacttaccaagcccccctc
gccatgtgctccaggtacaagcagccagctgtctgcaggcggcgggcgagtaacccctcccttagtgtcgttgtatccag
ccctggagtgccgggcaataatgcaacagatgtcacccacagcatttggtctgagtgactgggatgacgatgagatcctg
gcttcggtgctggccgtttcgcaacaggagtacttggaaagcatgaagaaaggtgccctgcaccgagacagtggttctga
caagagttgatacctggttccggctcttgcgctcgcctgacacccctttggtgtgcatgttttggcaggaaggatgataa
cacttggaacccctcccctcctccactgctgctgatcaacgctccttcagctgcccctttgctccccacttttggctctc
cgcagaagactcccccctctggtgcgctgagaaacagacaggtgcaaaagagagacaggatctcttccccaaggagctga
aacactcacaaactggggcatgctgggcttccccttcatctgccgtttttcattattaaaagaaataattgaactggtcc
tc
Transcript IDhabu1_s1426_g05108.t3
Definition-
>habu1_s1426_g05108.t3
cggggcctgggggagggggaggcaatagtcccgaggaagatgaggtcggcgccggctacaacagcgaagatgagtacgag
acggcggcagcccgcatcgagagcatggacccggccaccgtcgagcagcaggaacacaggttcgagaaggcgctgagaga
gaagaaagggttcatcataaaacagatgaaggaagatggggcctgcttgttccgggctgtggctgaccaggtatacggtg
accaagacatgcacgaagtggtcaggaagcactgcatggactacttgatgaagaatgccgactacttttccaattacgtg
acggaggatttcaccacttacattaaccgcaagcggaaaaacaactgtcatggcaaccacattgagatgcaggctatggc
agagatgtacaaccgacctgtggaggtttaccagtatggcacagagcccatcaatactttccatggcatccatcagaatg
aggatgagcccatccgggtgagctatcaccgcaacatacattacaactccgtggtgaaccccaacaaggctaccattggg
gtgggactagggctgccctccttcaagccagggtatgcagagcagtccttgatgaagaatgccatcaagacctcggagga
gtcctggatcgagcagcagatgctggaggataaaaagcgagcgaccgactgggaagccaccaacgaggctatcgaagaac
aggttgccagagagtcttatttgcagtggctgcgtgaccaggaaaagcaggccagacagccccgcaaagccagtgctact
tgcagctctgccacggcggccgcagcgagcggtttggaagaatggagtggtcgttccccacgtcaacgcagctcagcttc
ttccccggaacaccccgagctgcacaacgagctgaatgctgccaagcccccttctcctggaagcaccgcagccctagcac
ttaccaagcccccctcgccatgtgctccaggtacaagcagccagctgtctgcaggcggcgggcgagtaacccctccctta
gtgtcgttgtatccagccctggagtgccgggcaataatgcaacagatgtcacccacagcatttggtctgagtgactggga
tgacgatgagatcctggcttcggtgctggccgtttcgcaacaggagtacttggaaagcatgaagaaaggtgccctgcacc
gagacagtggttctgacaagagttgatacctggttccggctcttgcgctcgcctgacacccctttggtgtgcatgttttg
gcaggaaggatgataacacttggaacccctcccctcctccactgctgctgatcaacgctccttcagctgcccctttgctc
cccacttttggctctccgcagaagactcccccctctggtgcgctgagaaacagacaggtgcaaaagagagacaggatctc
ttccccaaggagctgaaacactcacaaactggggcatgctgggcttccccttcatctgccgtttttcattattaaaagaa
ataattgaactggtcctc

Protein
Protein IDhabu1_s1426_g05108.t1
Definition-
>habu1_s1426_g05108.t1
MDPATVEQQEHRFEKALREKKGFIIKQMKEDGACLFRAVADQVYGDQDMHEVVRKHCMDYLMKNADYFSNYVTEDFTTYI
NRKRKNNCHGNHIEMQAMAEMYNRPVEVYQYGTEPINTFHGIHQNEDEPIRVSYHRNIHYNSVVNPNKATIGVGLGLPSF
KPGYAEQSLMKNAIKTSEESWIEQQMLEDKKRATDWEATNEAIEEQVARESYLQWLRDQEKQARQPRKASATCSSATAAA
ASGLEEWSGRSPRQRSSASSPEHPELHNELNAAKPPSPGSTAALALTKPPSPCAPGLSDWDDDEILASVLAVSQQEYLES
MKKGALHRDSGSDKS
Protein IDhabu1_s1426_g05108.t2
Definition-
>habu1_s1426_g05108.t2
MDPATVEQQEHRFEKALREKKGFIIKQMKEDGACLFRAVADQVYGDQDMHEVVRKHCMDYLMKNADYFSNYVTEDFTTYI
NRKRKNNCHGNHIEMQAMAEMYNRPVEVYQYGTEPINTFHGIHQNEDEPIRYAEQSLMKNAIKTSEESWIEQQMLEDKKR
ATDWEATNEAIEEQVARESYLQWLRDQEKQARQPRKASATCSSATAAAASGLEEWSGRSPRQRSSASSPEHPELHNELNA
AKPPSPGSTAALALTKPPSPCAPGTSSQLSAGGGRVTPPLVSLYPALECRAIMQQMSPTAFGLSDWDDDEILASVLAVSQ
QEYLESMKKGALHRDSGSDKS
Protein IDhabu1_s1426_g05108.t3
Definition-
>habu1_s1426_g05108.t3
MDPATVEQQEHRFEKALREKKGFIIKQMKEDGACLFRAVADQVYGDQDMHEVVRKHCMDYLMKNADYFSNYVTEDFTTYI
NRKRKNNCHGNHIEMQAMAEMYNRPVEVYQYGTEPINTFHGIHQNEDEPIRVSYHRNIHYNSVVNPNKATIGVGLGLPSF
KPGYAEQSLMKNAIKTSEESWIEQQMLEDKKRATDWEATNEAIEEQVARESYLQWLRDQEKQARQPRKASATCSSATAAA
ASGLEEWSGRSPRQRSSASSPEHPELHNELNAAKPPSPGSTAALALTKPPSPCAPGTSSQLSAGGGRVTPPLVSLYPALE
CRAIMQQMSPTAFGLSDWDDDEILASVLAVSQQEYLESMKKGALHRDSGSDKS

  • MGU Home
  • Genome Projects
  • Information
  • Genome Browser
  • Blast Search
  • Chromosome
  • Keyword Search
  • Downloads

Gene ID:



Keyword:



  • Login

copyright © Marine Genomics Unit 2015
Okinawa Institute of Science and Technology
1919-1 Tancha, Onna-son, Kunigami-gun, Okinawa, Japan 904-0495