Protobothrops flavoviridis ver. 1.0

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDhabu1_s1426_g05111
Locus habu1_scaffold1426 : 419265 ... 426435 : -
To GenomeBrowser habu1_scaffold1426:419265..426435
Genes list of scaffold habu1_scaffold1426

Annotation by Blast2GO
Annotation GO
polyglutamine-binding protein 1 GO:0000380 GO:0010494 GO:0016607 GO:0034063 GO:0043021 GO:0043484 GO:0048814 GO:0071598

Expression profile
Libraries FPKM
>Adult
Venom fang forming tissue 15.9
Venom grand-1 16.3
Pit, infrared sensing 15.3
Nose 17.6
Brain-1 9.0
Eye 12.2
fetal fibroblast 33.1
venom gland-2 15.9
Brain-2 9.9
Spleen 10.3
Lung 12.2
Liver 8.9
Kidney 13.7
Pancreas 11.6
Small intestine 12.5
Large intestine 18.4
Stomach 15.8
heart 9.0
ovary 117.8
cheek muscle 18.8

Transcript
Transcript IDhabu1_s1426_g05111.t1
Definition-
>habu1_s1426_g05111.t1
gaggaacaaacctgctctaataggataagagggcgccgaagagggtgggcccaaaaaaattgagccctctttccctagga
ttggttggttgattttcatttaacgatgacgtttgaggaggcggggaaaagcttatcgggggggggaggaagagagcaat
tctgttgggccgcggattggtgtaaatgtgtcacgtgtaggtggttccaggagcaacaggaacggctgcggatccggtaa
cgtgaagggctgttcgccagtatagaaaactgattggaaaggcaacatttgcacatctgctccaatctgatgcctctgcc
agtggcactgcagtcccgcctggccaggcgaggcctgctgaagcatgtagaacctgagccggaagaggaaataattgcag
aagattatgatgatgatcacgttgattatgaagccacaagaatggagagcctgccaccaaactggtacaaagtcatcgac
ccggtttgctgcctgccttattattggaacatagaaagtgatctggtttcatggctctcgcctaacgatcccaactcggt
gatgaccaaagcagccaaaaaactgaagaacagcttagatgctgaaagcaaggcagaacgcttccatgataaggtagagc
gtgaagaggtgaaggaacgtcgctatcaccgccgggaagaattggccccctatcctaagagcaaaaaggcaagccgaaag
gatgaagaacttgatcccatggaccccagcgcttactccgacgctcctcggggaacctggtccacggggctgcccaagcg
gaacgaagccaagaccggtgcagataccacggccgccggtccactcttccagcagcgcccttatccaagccctggggctg
tcttgcgtgcgaatgcagaagcttctcgagccaagcagcaggactgagatgcccactgctccttttatccttgaatgtat
ttggtcattacgttctgaaaggcctgctgcaagagcagggctccctccggactgcagaccgggccagtggcagcctttcc
agatctttactacaactctggcatgtcagtggtaaagagatgctggtttttatagttcagaggcttctgaaaggctgcaa
gttcccaacatctttggggctttggagaggcgggtttttttccctgcggaagaggttttacactgatcgacctgctgact
tctgcagggaacagtctcctcacgggtctccatctccttctcccatcccactttgaatgtctatgaaaagttgagagata
acacgctttggtttttcccatataacaatttttatcagtttataatatttgcacggcataaagagaacgtttgcaaacag
gtttgtagagtctggctagtaaggcccagccaaggcaaggagatggaagccagcgcaccttccggccccctcctcctccc
tcagctcctcagagtagctaagacacgcagctgtttgattctgcttaataaatgatcagttgacacctggcttg
Transcript IDhabu1_s1426_g05111.t2
Definition-
>habu1_s1426_g05111.t2
gaggaacaaacctgctctaataggataagagggcgccgaagagggtgggcccaaaaaaattgagccctctttccctagga
ttggttggttgattttcatttaacgatgacgtttgaggaggcggggaaaagcttatcgggggggggaggaagagagcaat
tctgttgggccgcggattggtgtaaatgtgtcacgtgtaggtggttccaggagcaacaggaacggctgcggatccggtaa
cgtgaagggctgttcgccagaaaactgattggaaaggcaacatttgcacatctgctccaatctgatgcctctgccagtgg
cactgcagtcccgcctggccaggcgaggcctgctgaagcatgtagaacctgagccggaagaggaaataattgcagaagat
tatgatgatgatcacgttgattatgaagccacaagaatggagagcctgccaccaaactggtacaaagtcatcgacccggt
ttgctgcctgccttattattggaacatagaaagtgatctggtttcatggctctcgcctaacgatcccaactcggtgatga
ccaaagcagccaaaaaactgaagaacagcttagatgctgaaagcaaggcagaacgcttccatgataaggtagagcgtgaa
gaggtgaaggaacgtcgctatcaccgccgggaagaattggccccctatcctaagagcaaaaaggcaagccgaaaggatga
agaacttgatcccatggaccccagcgcttactccgacgctcctcggggaacctggtccacggggctgcccaagcggaacg
aagccaagaccggtgcagataccacggccgccggtccactcttccagcagcgcccttatccaagccctggggctgtcttg
cgtgcgaatgcagaagcttctcgagccaagcagcaggactgagatgcccactgctccttttatccttgaatgtatttggt
cattacgttctgaaaggcctgctgcaagagcagggctccctccggactgcagaccgggccagtggcagcctttccagatc
tttactacaactctggcatgtcagtggtaaagagatgctggtttttatagttcagaggcttctgaaaggctgcaagttcc
caacatctttggggctttggagaggcgggtttttttccctgcggaagaggttttacactgatcgacctgctgacttctgc
agggaacagtctcctcacgggtctccatctccttctcccatcccactttgaatgtctatgaaaagttgagagataacacg
ctttggtttttcccatataacaatttttatcagtttataatatttgcacggcataaagagaacgtttgcaaacaggtttg
tagagtctggctagtaaggcccagccaaggcaaggagatggaagccagcgcaccttccggccccctcctcctccctcagc
tcctcagagtagctaagacacgcagctgtttgattctgcttaataaatgatcagttgacacctggcttg
Transcript IDhabu1_s1426_g05111.t3
Definition-
>habu1_s1426_g05111.t3
gtgaccggggtttttcttgagcgcgcgcgggcgtgtgcgtggctctctggggcgttaaggagaaaactgattggaaaggc
aacatttgcacatctgctccaatctgatgcctctgccagtggcactgcagtcccgcctggccaggcgaggcctgctgaag
catgtagaacctgagccggaagaggaaataattgcagaagattatgatgatgatcacgttgattatgaagccacaagaat
ggagagcctgccaccaaactggtacaaagtcatcgacccggtttgctgcctgccttattattggaacatagaaagtgatc
tggtttcatggctctcgcctaacgatcccaactcggtgatgaccaaagcagccaaaaaactgaagaacagcttagatgct
gaaagcaaggcagaacgcttccatgataaggtagagcgtgaagaggtgaaggaacgtcgctatcaccgccgggaagaatt
ggccccctatcctaagagcaaaaaggcaagccgaaaggatgaagaacttgatcccatggaccccagcgcttactccgacg
ctcctcggggaacctggtccacggggctgcccaagcggaacgaagccaagaccggtgcagataccacggccgccggtcca
ctcttccagcagcgcccttatccaagccctggggctgtcttgcgtgcgaatgcagaagcttctcgagccaagcagcagga
ctgagatgcccactgctccttttatccttgaatgtatttggtcattacgttctgaaaggcctgctgcaagagcagggctc
cctccggactgcagaccgggccagtggcagcctttccagatctttactacaactctggcatgtcagtggtaaagagatgc
tggtttttatagttcagaggcttctgaaaggctgcaagttcccaacatctttggggctttggagaggcgggtttttttcc
ctgcggaagaggttttacactgatcgacctgctgacttctgcagggaacagtctcctcacgggtctccatctccttctcc
catcccactttgaatgtctatgaaaagttgagagataacacgctttggtttttcccatataacaatttttatcagtttat
aatatttgcacggcataaagagaacgtttgcaaacaggtttgtagagtctggctagtaaggcccagccaaggcaaggaga
tggaagccagcgcaccttccggccccctcctcctccctcagctcctcagagtagctaagacacgcagctgtttgattctg
cttaataaatgatcagttgacacctggcttg

Protein
Protein IDhabu1_s1426_g05111.t1
Definition-
>habu1_s1426_g05111.t1
MPLPVALQSRLARRGLLKHVEPEPEEEIIAEDYDDDHVDYEATRMESLPPNWYKVIDPVCCLPYYWNIESDLVSWLSPND
PNSVMTKAAKKLKNSLDAESKAERFHDKVEREEVKERRYHRREELAPYPKSKKASRKDEELDPMDPSAYSDAPRGTWSTG
LPKRNEAKTGADTTAAGPLFQQRPYPSPGAVLRANAEASRAKQQD
Protein IDhabu1_s1426_g05111.t2
Definition-
>habu1_s1426_g05111.t2
MPLPVALQSRLARRGLLKHVEPEPEEEIIAEDYDDDHVDYEATRMESLPPNWYKVIDPVCCLPYYWNIESDLVSWLSPND
PNSVMTKAAKKLKNSLDAESKAERFHDKVEREEVKERRYHRREELAPYPKSKKASRKDEELDPMDPSAYSDAPRGTWSTG
LPKRNEAKTGADTTAAGPLFQQRPYPSPGAVLRANAEASRAKQQD
Protein IDhabu1_s1426_g05111.t3
Definition-
>habu1_s1426_g05111.t3
MPLPVALQSRLARRGLLKHVEPEPEEEIIAEDYDDDHVDYEATRMESLPPNWYKVIDPVCCLPYYWNIESDLVSWLSPND
PNSVMTKAAKKLKNSLDAESKAERFHDKVEREEVKERRYHRREELAPYPKSKKASRKDEELDPMDPSAYSDAPRGTWSTG
LPKRNEAKTGADTTAAGPLFQQRPYPSPGAVLRANAEASRAKQQD

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Okinawa Institute of Science and Technology
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