Gene
| Gene Model ID | habu1_s1426_g05112 |
|---|---|
| Locus | habu1_scaffold1426 : 427016 ... 434930 : + |
| To GenomeBrowser | habu1_scaffold1426:427016..434930 |
| Genes list of scaffold | habu1_scaffold1426 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| mitochondrial import inner membrane translocase subunit tim17-b | GO:0005744 GO:0006886 GO:0009941 GO:0015450 GO:0031305 GO:0071806 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s1426_g05112.t1 | 1 | 1 | Tim17 | 8 | 131 | 1.7e-34 | 118.5 | 1.4e-38 | 2.1e-34 | 118.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s1426_g05112.t1 | gi|602630728|ref|XP_007422277.1| | PREDICTED: mitochondrial import inner membrane translocase subunit Tim17-B [Python bivittatus] | 0.0 |
| habu1_s1426_g05112.t1 | gi|637264584|ref|XP_003216964.2| | PREDICTED: mitochondrial import inner membrane translocase subunit Tim17-B [Anolis carolinensis] | 0.0 |
| habu1_s1426_g05112.t1 | gi|558173509|ref|XP_006125613.1| | PREDICTED: mitochondrial import inner membrane translocase subunit Tim17-B-like isoform X2 [Pelodiscus sinensis] | 0.0 |
| habu1_s1426_g05112.t1 | gi|591350805|ref|XP_007069855.1| | PREDICTED: mitochondrial import inner membrane translocase subunit Tim17-B [Chelonia mydas] | 0.0 |
| habu1_s1426_g05112.t1 | gi|530576918|ref|XP_005282420.1| | PREDICTED: mitochondrial import inner membrane translocase subunit Tim17-B [Chrysemys picta bellii] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 19.9 |
| Venom grand-1 | 78.6 |
| Pit, infrared sensing | 32.6 |
| Nose | 24.9 |
| Brain-1 | 11.9 |
| Eye | 31.2 |
| fetal fibroblast | 32.6 |
| venom gland-2 | 77.3 |
| Brain-2 | 13.0 |
| Spleen | 43.7 |
| Lung | 33.1 |
| Liver | 101.2 |
| Kidney | 65.8 |
| Pancreas | 101.0 |
| Small intestine | 74.8 |
| Large intestine | 38.0 |
| Stomach | 66.0 |
| heart | 59.8 |
| ovary | 136.7 |
| cheek muscle | 128.1 |
Transcript
| Transcript ID | habu1_s1426_g05112.t1 |
|---|---|
| Definition | - |
>habu1_s1426_g05112.t1 gactcttgtcacgtgcacccggccggccaataggcgctggtcacgtgatccgcccggaggcgtctttccttttcgcgtga gccatcgagcttaaggccgggagcaatggaggaatatgcccgggaaccttgcccctggcggattgtggatgactgtggtg gtgcatttactatgggattgattggcgggggtgtctttcaagcagtcaaaggctttcgcaatgctccagtgggtgtcagg catcgattcagaggcagcatcaatgctatcagagtcagagcgccacagattggagggagctttgcagtgtggggtgggct tttttccaccattgactgtggtctagtgaagatgcgaggtaaagaagatccgtggaactccattaccagtggggcactca ctggggctgtattagcatcgcgcagtgggccgttggccatggtgggctctgctatgatgggaggcatcttgcttgccctg atagaaggtgtggggattttgttgacaagatacacagcccagcagttccaaaaccctaatccctttggagaagatcctag tcaactgcctcccaaagatggttcaccgcctacaggatttacaggctatggacattatcagtgagccagtgtgcggcctg gatcacttctatttttagaatcgggcaagatttttccccccttgaaaataagacattcacccaagagggcaagcaaagca tggaggggatttggttcttagagttaacttttaagtttggcggaagggaggggcaaggaaaacatggctgggggtttgag ctgtataataactacctctatgagggattaagaagcttgcagtgatgaaatgaggtgccccaggattaattccatacgat gacggaaccaacgcttatcaggagaacttggaatcctaggatgatatttgcctgaagaactggggtgtgcaattacaatt aattgactatggcaaattttaaagggccgttttcctgactttctgacggaaggactcctccaattttctctgtttgatgg gaatgcctcttaagttatcttttaaaaacctgtaaaccaagaaatgtgttttcccagaccttggatgaaagagttattgt agcaaggggaaactctgccactctagcagtgatgatatcctgtgataggtttcttcattgtaggtcagatccccgtgtgc tgttgagccagaataagagatgctgctacattgaatcctcacccctttctttcatttaatagtactgttgttgctggttg cttaaggtttaaaaaaaaaacaacgaagagggaatgacgatggatcaaaacagggttcgtggccttgtctcaccttaaaa ggctgggtagctctcccttggaactaagttttattccaataaaatgctgtgtcagttccatcttc |
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Protein
| Protein ID | habu1_s1426_g05112.t1 |
|---|---|
| Definition | - |
>habu1_s1426_g05112.t1 MEEYAREPCPWRIVDDCGGAFTMGLIGGGVFQAVKGFRNAPVGVRHRFRGSINAIRVRAPQIGGSFAVWGGLFSTIDCGL VKMRGKEDPWNSITSGALTGAVLASRSGPLAMVGSAMMGGILLALIEGVGILLTRYTAQQFQNPNPFGEDPSQLPPKDGS PPTGFTGYGHYQ |
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