Gene
| Gene Model ID | habu1_s1426_g05115 |
|---|---|
| Locus | habu1_scaffold1426 : 496789 ... 546645 : + |
| To GenomeBrowser | habu1_scaffold1426:496789..546645 |
| Genes list of scaffold | habu1_scaffold1426 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| histone deacetylase 6 | GO:0000118 GO:0000209 GO:0001047 GO:0004407 GO:0005829 GO:0005881 GO:0005901 GO:0006515 GO:0006807 GO:0007026 GO:0008013 GO:0008017 GO:0008270 GO:0009636 GO:0009967 GO:0010469 GO:0010634 GO:0010870 GO:0016235 GO:0016236 GO:0016342 GO:0016575 GO:0030286 GO:0030424 GO:0030425 GO:0031252 GO:0031593 GO:0032418 GO:0034983 GO:0040029 GO:0042826 GO:0042903 GO:0043014 GO:0043162 GO:0043204 GO:0045298 GO:0045598 GO:0045861 GO:0048156 GO:0048471 GO:0048487 GO:0051879 GO:0070201 GO:0070840 GO:0070842 GO:0070845 GO:0070846 GO:0070848 GO:0071218 GO:0090035 GO:0090042 GO:1901300 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s1426_g05115.t1 | 3 | 1 | Hist_deacetyl | 137 | 437 | 0.0 | 433.4 | 0.0 | 0.0 | 287.7 |
| habu1_s1426_g05115.t1 | 3 | 2 | Hist_deacetyl | 534 | 654 | 0.0 | 433.4 | 2.4e-30 | 1.2e-26 | 93.7 |
| habu1_s1426_g05115.t1 | 3 | 3 | Hist_deacetyl | 654 | 725 | 0.0 | 433.4 | 3.3e-16 | 1.6e-12 | 47.3 |
| habu1_s1426_g05115.t1 | 1 | 1 | zf-UBP | 794 | 854 | 3.7e-18 | 65.3 | 2.4e-21 | 1.2e-17 | 63.7 |
| habu1_s1426_g05115.t1 | 1 | 1 | L_HGMIC_fpl | 868 | 1010 | 9.2e-40 | 136.5 | 3.09687e-43 | 1.5e-39 | 135.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s1426_g05115.t1 | gi|602630720|ref|XP_007422273.1| | PREDICTED: histone deacetylase 6 [Python bivittatus] | 0.0 |
| habu1_s1426_g05115.t1 | gi|637265007|ref|XP_008102145.1| | PREDICTED: histone deacetylase 6 [Anolis carolinensis] | 0.0 |
| habu1_s1426_g05115.t1 | gi|612059569|ref|XP_007507740.1| | PREDICTED: histone deacetylase 6 isoform X4 [Monodelphis domestica] | 0.0 |
| habu1_s1426_g05115.t1 | gi|612059563|ref|XP_007507737.1| | PREDICTED: histone deacetylase 6 isoform X1 [Monodelphis domestica] | 0.0 |
| habu1_s1426_g05115.t1 | gi|612059571|ref|XP_007507741.1| | PREDICTED: histone deacetylase 6 isoform X5 [Monodelphis domestica] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 3.4 |
| Venom grand-1 | 2.3 |
| Pit, infrared sensing | 3.1 |
| Nose | 3.6 |
| Brain-1 | 2.8 |
| Eye | 4.2 |
| fetal fibroblast | 2.6 |
| venom gland-2 | 4.6 |
| Brain-2 | 2.3 |
| Spleen | 2.4 |
| Lung | 2.4 |
| Liver | 2.7 |
| Kidney | 6.3 |
| Pancreas | 3.4 |
| Small intestine | 2.5 |
| Large intestine | 3.5 |
| Stomach | 3.4 |
| heart | 5.8 |
| ovary | 6.4 |
| cheek muscle | 6.4 |
Transcript
| Transcript ID | habu1_s1426_g05115.t1 |
|---|---|
| Definition | - |
>habu1_s1426_g05115.t1 agttggttcacccaccccgaacggaatggtctcgcccagtttctaccgagggcggcgaatggtttccctcgcggaggggg agcggcgccgcgaggtgacagcatcaggcggcgccttaggagagagagagacagagcgggctcaggacgtgggaagggcg tggccgggcagccttagcgccaggattgaaggaggcagtatctcaatggcttctgatttgggaaatggctcagtattgga ccccaaatctgtgcctgctttggacattcaagctccattgaaaaaggctaacaggaagggagggcttccagaggccaagc ggaaaggacgggcaaaaaagatgaacaaagatgctgaagatttgcttttgggcctgcagcgactggatcttacttcagaa tgtgctgctcccttaggaactggactgatttgggataatcgaatgaccgaattttgctgcccgtgggatgaaagtttccc agagtgcccagagcggttggtgactattcgggacaaactgcttcagtatgaactgttggaacgttgtgtcccagttttgg gccgagaaatttctgaggaagagatcctcttggctcacagtcaagaatacttgatgctcatgaaatcaactgaaacaatg agtgagactgagttaaggtctctggcagatacctttgattctgtttacctgcatccaaatttctaccgctgtgcctgcct tgctgctggttctgtcttgcaacttgtggagaaagtatggtctggagaactccgtaatgggctggctgtggttaggcctc ctggacaccatgctcaccgcagcaagatgaatggctactgcatgttcaacaacataggcattgcagcgcaatatgcccga cagaaactgggggtggagcgagtgcttatcgttgactgggatgtgcaccatgggcaaggccttcaatatctctttgagga gaatcccagcgtcctttatttctccatccatcgctacgaaggagggaatttctggccccaccttccagaatctgacagtc acgcagtgggcagaggtcggggagagggctacaacatcaacgtgccctggaaccagaccggaatgagggatgctgactac ctctctgcctttttacatgttctactaccagtggccttggagttccaaccccagatggtcctggttgctgcgggttttga tgccgtaattggtgaccctaagggggagatggctgccaccccagcatgctttgctcaactgacacacctgttaaagtcac tggctggaggcaagctgatcttatctctggagggtgggtataatctccagtctttggcagagggaacctgcacggtcctt aagactcttctaggagatccctgcccgctgatggaatcacctttcctcccatgtagcagtgctctcagctcagtgtctca gaccattgcagttcatagcaagtattggaagaacctacggaggatcagtgccgatgtgcctcaggaggatggcaagctca gcgtagcttggctgtcagccagccctgtctctgtagctgataccctctccaggtcagcggctgaactgatacagcctcag ccccctttttgcacgggactagtctatgatgagaaaatgatggagcactacaatatgtgggacagccatcatccagagct gcctcagagagtatccaggatcttccagcgccacagggagctgcatctgacagaaagcccggcttatgtggagacattga agtccacagccaccatgaagccccgtgacctgcatcgccagggggaccagtacaattctgtctacatctgtgccagctct tatgagtgtgcccggttggcagctggatccgcattcagtgcagtagaggctgtgctctctgggaagactcaaaatgctgt ggccattgtccgcccgccaggacaccatgctgaatcagatactgcctgtggcttctgcttcttcaattcggtggctttgg cagcacgccatgcccagcgcttggcccagaggccgttgagtgttttgtacatctccctccatcggtatgacaatggcact ttcttccccacttctgaggatgcagattatgaccgagtgggtgtggggcctggtgaaggcttcacccttaacgtgccttg gaactgttcccggatgggagactctgagtatctggcagccttccatcagatcgtcatgcctgttgcctatgaggccagct tgcagcatcaccgccgagtcaacattgaggttgtcctgttggatgaagcagcaggaggctgttcttcctttgacaagcag cttggggaaggtggggccgacagtgggctcttttatgccgtgactcccttaccctggtgcccccacctcagctcagtgct gcctgtgcctcctgtgggcttgaatgtgttggagccttgtgcagaatgtggtagtgagatggagaactgggtttgtctgg tgtgctataaggtctgttgtggacgctacattaatcaacatatgctggatcacaataaggaatctgggcatccactggta cttagctttgcagatctctctgcttggtgctatgactgccaagcctatatccatcacccagtccttcttgaagccaagtg ccaggctcacaagctgaatgtgagcgccgtgggctccttcggcctctaccaagtctgcacggagcaggatggggtcctcc agtgtgaaggatcgctggtcactctaacccccatcccatctttcaaagcagctgctgtctttgtcctgatggccctggtg ttggtgatgggcagtgtggcctccttgggtcttttctgggtctgcagcgcaggaaccgtctacaaggtgtgtgcctggca gcagctttcagcagcgacttgtcaggctcttggctgcctggtcttcccagatggctggggagcgccagaggtgagggctc tgtgtgggccccaggccaggagctacaccctgggtacctgctcgatccactgggcctttactctcgccttgctgggcatc gctgacgcattggttctggccaccctcgctttcgtgctgggaaacaggcaggatgctctcttgcctgcaggctacacacc accccgagaggggagaggtgtgacttcagcgctgactccggattgatcccaaccagcaaacattcttcagagggggatat gtcatagttttgctgtacccgttgcaataaattttaaaaaatgataatattat |
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Protein
| Protein ID | habu1_s1426_g05115.t1 |
|---|---|
| Definition | - |
>habu1_s1426_g05115.t1 MVSLAEGERRREVTASGGALGERETERAQDVGRAWPGSLSARIEGGSISMASDLGNGSVLDPKSVPALDIQAPLKKANRK GGLPEAKRKGRAKKMNKDAEDLLLGLQRLDLTSECAAPLGTGLIWDNRMTEFCCPWDESFPECPERLVTIRDKLLQYELL ERCVPVLGREISEEEILLAHSQEYLMLMKSTETMSETELRSLADTFDSVYLHPNFYRCACLAAGSVLQLVEKVWSGELRN GLAVVRPPGHHAHRSKMNGYCMFNNIGIAAQYARQKLGVERVLIVDWDVHHGQGLQYLFEENPSVLYFSIHRYEGGNFWP HLPESDSHAVGRGRGEGYNINVPWNQTGMRDADYLSAFLHVLLPVALEFQPQMVLVAAGFDAVIGDPKGEMAATPACFAQ LTHLLKSLAGGKLILSLEGGYNLQSLAEGTCTVLKTLLGDPCPLMESPFLPCSSALSSVSQTIAVHSKYWKNLRRISADV PQEDGKLSVAWLSASPVSVADTLSRSAAELIQPQPPFCTGLVYDEKMMEHYNMWDSHHPELPQRVSRIFQRHRELHLTES PAYVETLKSTATMKPRDLHRQGDQYNSVYICASSYECARLAAGSAFSAVEAVLSGKTQNAVAIVRPPGHHAESDTACGFC FFNSVALAARHAQRLAQRPLSVLYISLHRYDNGTFFPTSEDADYDRVGVGPGEGFTLNVPWNCSRMGDSEYLAAFHQIVM PVAYEASLQHHRRVNIEVVLLDEAAGGCSSFDKQLGEGGADSGLFYAVTPLPWCPHLSSVLPVPPVGLNVLEPCAECGSE MENWVCLVCYKVCCGRYINQHMLDHNKESGHPLVLSFADLSAWCYDCQAYIHHPVLLEAKCQAHKLNVSAVGSFGLYQVC TEQDGVLQCEGSLVTLTPIPSFKAAAVFVLMALVLVMGSVASLGLFWVCSAGTVYKVCAWQQLSAATCQALGCLVFPDGW GAPEVRALCGPQARSYTLGTCSIHWAFTLALLGIADALVLATLAFVLGNRQDALLPAGYTPPREGRGVTSALTPD |
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