Gene
| Gene Model ID | habu1_s1426_g05120 |
|---|---|
| Locus | habu1_scaffold1426 : 657747 ... 685288 : - |
| To GenomeBrowser | habu1_scaffold1426:657747..685288 |
| Genes list of scaffold | habu1_scaffold1426 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| prickle-like protein 3 | GO:0008270 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s1426_g05120.t1 | 1 | 1 | PET | 75 | 177 | 2.49431e-43 | 146.0 | 0.0 | 5.99756e-43 | 144.8 |
| habu1_s1426_g05120.t1 | 3 | 1 | LIM | 186 | 246 | 1.6e-24 | 85.7 | 1.5e-14 | 7.6e-11 | 41.9 |
| habu1_s1426_g05120.t1 | 3 | 2 | LIM | 251 | 305 | 1.6e-24 | 85.7 | 4.4e-13 | 2.2e-09 | 37.2 |
| habu1_s1426_g05120.t1 | 3 | 3 | LIM | 311 | 364 | 1.6e-24 | 85.7 | 1.2e-10 | 6.1e-07 | 29.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s1426_g05120.t1 | gi|602630708|ref|XP_007422267.1| | PREDICTED: prickle-like protein 3-like isoform X1 [Python bivittatus] | 0.0 |
| habu1_s1426_g05120.t1 | gi|602630712|ref|XP_007422269.1| | PREDICTED: prickle-like protein 3-like isoform X3 [Python bivittatus] | 0.0 |
| habu1_s1426_g05120.t1 | gi|637255099|ref|XP_008120960.1| | PREDICTED: prickle-like protein 3 [Anolis carolinensis] | 0.0 |
| habu1_s1426_g05120.t1 | gi|557008858|ref|XP_006005476.1| | PREDICTED: prickle-like protein 1-like [Latimeria chalumnae] | 0.0 |
| habu1_s1426_g05120.t1 | gi|641783134|ref|XP_008173972.1| | PREDICTED: prickle-like protein 3 [Chrysemys picta bellii] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 7.7 |
| Venom grand-1 | 6.1 |
| Pit, infrared sensing | 5.9 |
| Nose | 5.7 |
| Brain-1 | 1.5 |
| Eye | 6.4 |
| fetal fibroblast | 0.6 |
| venom gland-2 | 6.0 |
| Brain-2 | 1.3 |
| Spleen | 6.2 |
| Lung | 8.2 |
| Liver | 5.7 |
| Kidney | 16.0 |
| Pancreas | 19.1 |
| Small intestine | 3.9 |
| Large intestine | 4.0 |
| Stomach | 8.4 |
| heart | 1.6 |
| ovary | 7.7 |
| cheek muscle | 1.3 |
Transcript
| Transcript ID | habu1_s1426_g05120.t1 |
|---|---|
| Definition | - |
>habu1_s1426_g05120.t1 tgcgcccgggcgctgaagacggcgggatcggggccatgttcaaccgcggatcgcggcgccgacgatccacccgagccctg cctgagttggaggaccctgaccggggccaaccgtgtcaggcgtgtggggagcagtgcccaggcttcctagtgcatggatg gaggaagatctgccagcactgcaagtgtccccgggaagagcatgcggtacgcatggtccctgtcgacttggaaaggatga tgtgccgtctgatttctgacttccagcgtcactccatctcagatgatgattctggctgtgcttcggaggaatatgcttgg gttcctccaggactcaagcctgaacaggtctatcagttcttcagctgcctcccagaagacaaagttccctatgtcaacag ccctggagaacggtaccgcattcgtcagctgttgcaccagcttccacctcatgacagtgaggctcagtactgcagctccc tggaggaggaggaggcaaaagagttgaaattattctcacagcagcgtaagcgagagaaccttggccgaggaacggtccga ctctttcctgtcaccataactggagccatctgtgaacagtgtggaaaacagatttgcggaggggacattgctgtttttgc cagtcgagctgggcatggtgcctgctggcaccctcagtgctttgtttgtaccacgtgtcgggagctcctcgttgacctga tttacttctaccaggagggcaaaatctactgtgggcgccaccatgccgagcgcctcaagccgcgctgcgaagcttgtgat gagatcatctttgcagatgagtgcacagaagccgaaggccgtcactggcacatgcgccatttctgctgctttgagtgtga ggaagccctgggtgggcaacgatacatcatgcgccaacgtcgcccctattgctgccgttgttatgagagcctctatgcag aatactgcgatgcatgcggggagcacatcggtattgaccagggtcagatgacctacgagggccagcactggcacgccacc gatgcctgtttcagctgctcccgttgccagcaacccctcctggggaagcctttcctgcccaagcagggtcagatcttctg ttcccgggcctgcagcctcggtgaagaccccaacggctcagattcctgtgactctgccttgcaaagcacccgtcctcagg atgctcggaggaccagctggcagcaacgccgagttcaatctcagggcacgtcaccctcctccatcacccgctccatttcc tttgcggggaagacagtaccgtcagactctaccccaaggacccgaaggagctggagtggggcgcgtggggatgaggaaga ggaggtgccgacagaaatggaagagctctccgatccagacagcaatggttccggctacagccagagttgtgaggagccag tggaacgggcttcccggggaacatcgacttgcctgcccccagccactgaccaggaaccaggaacagggaccgagctccaa ccacgtttccagcgcacctcccccttgcgccactctatgccggagctggggatgtcctcttccaaaacctctgactggag cagcagttccagttccaaaattcaagccactgccaggccacgattcagcgagggcagagagcccgggacttttgcccggg gaggagtaccccgggttagcttccgggaacccttaatctcgggagagcccagcaccccttcccctgagcaagcctccttg gagacctctatgctgcagaagggaggagccatccggggacaccctcgctccacttcagataactctctcaacctggggag ccaggactggaggccaaggaaggggaggggggaaaggaagggagccaacctgtcctattcagcttcagagagtgcttttc ctgcctggcaccggcgctaccctcccaggggatgggacttcagctcctccgagtcctccgattcatcctcggaggaagaa ggctactttctaggggagcccatacccctgccaccccatttgcgtgttggagccagttccccagaagtcacgccacccag cgaatcagctcacaaaaggcagcgccgaagactgcgtgtggtccgggacaagaactgtgtggtggcctgagctgtcctgg tttttgctattgcagtccagctgtaatcgggctttgaagcttgtctgaatggtgaaatgttgatcattctctctctgagg gcctctgcagccagtggccattgtttcttcctccttgacccgtgcctcttttgccagggattctcctcagaaagtgacct cttcatcatgaccgctgtttctgttgaaacctttcctcagggagatttgagcggttggttttttttttcccctcacgctg acctctgatctctagacgtgacccttgtgtgaagaaatctggaagtgtctctgtggtgttctttgaactgtggtagttta ttttccgtggtggccttttgacctctcaactgtgacctcctgaacgcagctttaactttgtcctcttgaaagttcaagtc ctgtaaacctctgcactgtaccccgtgagcgagcttcgagcaacagcaatttacctgggaacccttgcacttctgttttg acctttttactgtgaccttgaatatttgcaccattcctgggtgatccttttggcccttgatccgagttgctattactaat ataagtctctagcaagatagcagtttcaaactttgggattttcttcctttggtagcaaggtgtttggtggtgatatgcgt gtgattgtgtgtgtacactgagtgaggctgaactgttcccttgctttccatgctagaagtggaacatgggcagaagatgt cttctagggggtaaacccctcaatgtatcttcctaatcaaactggacctgtgattttttcccccccagtctagtctctct gcactgtgtgcatttctaaagtttgcagttttttaaaaaatgatttttttttctaattaagagttttaatttaaatgaaa ttgaaataaacttcatgaaaaaaaccacttct |
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Protein
| Protein ID | habu1_s1426_g05120.t1 |
|---|---|
| Definition | - |
>habu1_s1426_g05120.t1 MFNRGSRRRRSTRALPELEDPDRGQPCQACGEQCPGFLVHGWRKICQHCKCPREEHAVRMVPVDLERMMCRLISDFQRHS ISDDDSGCASEEYAWVPPGLKPEQVYQFFSCLPEDKVPYVNSPGERYRIRQLLHQLPPHDSEAQYCSSLEEEEAKELKLF SQQRKRENLGRGTVRLFPVTITGAICEQCGKQICGGDIAVFASRAGHGACWHPQCFVCTTCRELLVDLIYFYQEGKIYCG RHHAERLKPRCEACDEIIFADECTEAEGRHWHMRHFCCFECEEALGGQRYIMRQRRPYCCRCYESLYAEYCDACGEHIGI DQGQMTYEGQHWHATDACFSCSRCQQPLLGKPFLPKQGQIFCSRACSLGEDPNGSDSCDSALQSTRPQDARRTSWQQRRV QSQGTSPSSITRSISFAGKTVPSDSTPRTRRSWSGARGDEEEEVPTEMEELSDPDSNGSGYSQSCEEPVERASRGTSTCL PPATDQEPGTGTELQPRFQRTSPLRHSMPELGMSSSKTSDWSSSSSSKIQATARPRFSEGREPGTFARGGVPRVSFREPL ISGEPSTPSPEQASLETSMLQKGGAIRGHPRSTSDNSLNLGSQDWRPRKGRGERKGANLSYSASESAFPAWHRRYPPRGW DFSSSESSDSSSEEEGYFLGEPIPLPPHLRVGASSPEVTPPSESAHKRQRRRLRVVRDKNCVVA |
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