Gene
Gene Model ID | habu1_s1426_g05124 |
---|---|
Locus | habu1_scaffold1426 : 737521 ... 744168 : - |
To GenomeBrowser | habu1_scaffold1426:737521..744168 |
Genes list of scaffold | habu1_scaffold1426 |
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
habu1_s1426_g05124.t1 | 1 | 1 | MAGE | 81 | 252 | 0.0 | 185.1 | 0.0 | 0.0 | 184.7 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
habu1_s1426_g05124.t1 | gi|602630696|ref|XP_007422261.1| | PREDICTED: melanoma-associated antigen G1-like isoform X1 [Python bivittatus] | 0.0 |
habu1_s1426_g05124.t1 | gi|602630700|ref|XP_007422263.1| | PREDICTED: melanoma-associated antigen G1-like isoform X3 [Python bivittatus] | 0.0 |
habu1_s1426_g05124.t1 | gi|637255078|ref|XP_008120916.1| | PREDICTED: melanoma-associated antigen G1-like [Anolis carolinensis] | 0.0 |
habu1_s1426_g05124.t1 | gi|530656995|ref|XP_005314398.1| | PREDICTED: melanoma-associated antigen G1-like isoform X1 [Chrysemys picta bellii] | 0.0 |
habu1_s1426_g05124.t1 | gi|564260330|ref|XP_006269078.1| | PREDICTED: melanoma-associated antigen G1-like [Alligator mississippiensis] | 0.0 |
Expression profile
Libraries | FPKM |
---|---|
>Adult | |
Venom fang forming tissue | 8.3 |
Venom grand-1 | 6.5 |
Pit, infrared sensing | 8.6 |
Nose | 12.6 |
Brain-1 | 8.2 |
Eye | 9.8 |
fetal fibroblast | 11.6 |
venom gland-2 | 22.3 |
Brain-2 | 9.9 |
Spleen | 6.4 |
Lung | 5.7 |
Liver | 2.0 |
Kidney | 9.0 |
Pancreas | 5.8 |
Small intestine | 5.5 |
Large intestine | 6.4 |
Stomach | 7.6 |
heart | 4.3 |
ovary | 51.2 |
cheek muscle | 12.0 |
Transcript
Transcript ID | habu1_s1426_g05124.t1 |
---|---|
Definition | - |
>habu1_s1426_g05124.t1 gcagggaaagtcctcaacttacgaccggttgggtagtcctcgacttacgaccggtttagtcctcgacttatgaccggttt agtcctcgacttacgaccggttggggtcgcggcattaaaaaggcctctttccaaagccatgtctcagcacaggcatagta gcagcagcagcagaggatctggctcttcaaaggtacggcatatggacgttgatgaagaattcactttcagtccgtctcaa acgctaagtcaggcgcaacgtaatttggagcaacacccccccgctgaagtggaacaaaaagtaaatgaactagtgcaatt ccttctgatcaaggatcagaagaaaatccctattaaacggacagatattctgaaatatgttgtcaaagactacaaagatc tctttcctgagatcctcagacgagccaaccagactcttcaacaggtatttgggctgggagtggtggaaattgacccaaag taccattcctacatcctgatcagtaaatttcctcctttggaaggggatattgtgaatgacgatgagaacgctcccaagat gggcctccttatagtaatacttagtcttatcttcatgaaaggcaacgtggtcaaagaatctgctgtttgggaaatgctga ggagattacatattgactgttctgggggaaaaaacaaagtctttggcgatatcaaaaagctggtgacagaggaatttgtg aggcaaaaatatctggaatatacacgtctcccacacacagatccgcctgagtttgagttcaggtggggatcgcgagcttt taaagagacctccaagaagcagatcctacagtttgttgctaagatacaaaagcagaatcccaaatcttggatgagccagt acaatgaagcggaagcagaagctggtgcggtgggaaagttataaatattatggtgttgttcaattataaagaattatcaa actcctttcatggaactgctacaaccactgcttgttttctgtcactgcttgttttaatgtaaagtgctctgtgcttaata agttccctgtttgtgaaggaaagattccagaatagactgggccattttactggtgatgaagacaagactcttctctaaag ctctctgattattcaagcattagcaatagtattttctggaaataagccgatagaatatttactggaaataaatatatttt tgcaatcatttttc |
Protein
Protein ID | habu1_s1426_g05124.t1 |
---|---|
Definition | - |
>habu1_s1426_g05124.t1 MTGLVLDLRPVGVAALKRPLSKAMSQHRHSSSSSRGSGSSKVRHMDVDEEFTFSPSQTLSQAQRNLEQHPPAEVEQKVNE LVQFLLIKDQKKIPIKRTDILKYVVKDYKDLFPEILRRANQTLQQVFGLGVVEIDPKYHSYILISKFPPLEGDIVNDDEN APKMGLLIVILSLIFMKGNVVKESAVWEMLRRLHIDCSGGKNKVFGDIKKLVTEEFVRQKYLEYTRLPHTDPPEFEFRWG SRAFKETSKKQILQFVAKIQKQNPKSWMSQYNEAEAEAGAVGKL |