Gene
| Gene Model ID | habu1_s1426_g05128 |
|---|---|
| Locus | habu1_scaffold1426 : 947133 ... 966567 : + |
| To GenomeBrowser | habu1_scaffold1426:947133..966567 |
| Genes list of scaffold | habu1_scaffold1426 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s1426_g05128.t1 | 1 | 1 | WGG | 11 | 104 | 2.5e-26 | 91.5 | 5.0e-30 | 2.5e-26 | 91.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s1426_g05128.t1 | gi|602654163|ref|XP_007432927.1| | PREDICTED: pre-rRNA-processing protein TSR2 homolog [Python bivittatus] | 0.0 |
| habu1_s1426_g05128.t1 | gi|327261905|ref|XP_003215767.1| | PREDICTED: pre-rRNA-processing protein TSR2 homolog [Anolis carolinensis] | 0.0 |
| habu1_s1426_g05128.t1 | gi|147906396|ref|NP_001089467.1| | uncharacterized protein LOC734518 [Xenopus laevis] | 0.0 |
| habu1_s1426_g05128.t1 | gi|301620560|ref|XP_002939638.1| | PREDICTED: pre-rRNA-processing protein TSR2 homolog [Xenopus (Silurana) tropicalis] | 0.0 |
| habu1_s1426_g05128.t1 | gi|532110257|ref|XP_005339840.1| | PREDICTED: pre-rRNA-processing protein TSR2 homolog isoform X1 [Ictidomys tridecemlineatus] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 8.1 |
| Venom grand-1 | 14.4 |
| Pit, infrared sensing | 9.3 |
| Nose | 8.8 |
| Brain-1 | 4.3 |
| Eye | 12.5 |
| fetal fibroblast | 17.9 |
| venom gland-2 | 38.8 |
| Brain-2 | 4.4 |
| Spleen | 10.0 |
| Lung | 9.0 |
| Liver | 12.2 |
| Kidney | 8.5 |
| Pancreas | 25.2 |
| Small intestine | 9.2 |
| Large intestine | 8.7 |
| Stomach | 12.8 |
| heart | 16.7 |
| ovary | 52.7 |
| cheek muscle | 28.6 |
Transcript
| Transcript ID | habu1_s1426_g05128.t1 |
|---|---|
| Definition | - |
>habu1_s1426_g05128.t1 ccgtccaaactccattggacttcgttcgcgcagagtttcttgggaatggtagtgtcgtgggtattatttgcgcggagaag cgtacagtggttggaattgaatagcagccattttgttggatttgcttaattgaaaatgtatgttttacggaattgaaatt actatatatcatggcccagacgagtttaatcgattattctgggattgacttccggctgcctgccgctgacatggcgacgc cgaaggaggaggcacgtggccttttcaggcagggcgtgcaagcggtgttggacagctgggccgtgttgcagatagcagtt gaaaatggctttggaggagcacatagccaagagaaagctgaatggatggtaggggctgtggagcaatactttgagagcaa tgttctgttatttgaccgtgtgtccaatctctctgcagttgaccttgaaccagaggagatagaggacttccttgctgaac tgatgaacaatgaatttaacactataatagaagatggaagcttggctcaggtaagccagcaactgtgcctgtttttcaga cagagccatcagggagacacagcagcaatgcttgatgccatcatccatctggcacagaagaaacaagaggctaggagagc agttgccaaatctcagccagctgcagaaagcagcagtgaggaagaacaagaaacggaagaagaggccatggactgcagtg ctggttccagcattaatggaatacaaagcaatccatctccactgtcagatgggactactgaagatggatggatgttggtg accaggaaaaagaaatgaaggaaaaaactgtggtagacctggacagatgcagcaagccttgaattcttgtataggacaca taataggcttccagagaagcctgggtacattggaagcacttttgttggctgtatctttgctcctgatttaacagaggcta aatggaattcaacttggtggcataaaatatttttaatctttgaagttt |
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Protein
| Protein ID | habu1_s1426_g05128.t1 |
|---|---|
| Definition | - |
>habu1_s1426_g05128.t1 MATPKEEARGLFRQGVQAVLDSWAVLQIAVENGFGGAHSQEKAEWMVGAVEQYFESNVLLFDRVSNLSAVDLEPEEIEDF LAELMNNEFNTIIEDGSLAQVSQQLCLFFRQSHQGDTAAMLDAIIHLAQKKQEARRAVAKSQPAAESSSEEEQETEEEAM DCSAGSSINGIQSNPSPLSDGTTEDGWMLVTRKKK |
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