Gene
| Gene Model ID | habu1_s1426_g05136 |
|---|---|
| Locus | habu1_scaffold1426 : 1208013 ... 1232095 : + |
| To GenomeBrowser | habu1_scaffold1426:1208013..1232095 |
| Genes list of scaffold | habu1_scaffold1426 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s1426_g05136.t1 | 1 | 1 | Sema | 54 | 495 | 0.0 | 516.3 | 0.0 | 0.0 | 516.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s1426_g05136.t1 | gi|602645665|ref|XP_007429270.1| | PREDICTED: semaphorin-3F-like isoform X2 [Python bivittatus] | 0.0 |
| habu1_s1426_g05136.t1 | gi|602645663|ref|XP_007429269.1| | PREDICTED: semaphorin-3F-like isoform X1 [Python bivittatus] | 0.0 |
| habu1_s1426_g05136.t1 | gi|602645669|ref|XP_007429272.1| | PREDICTED: semaphorin-3F-like isoform X4 [Python bivittatus] | 0.0 |
| habu1_s1426_g05136.t1 | gi|602645667|ref|XP_007429271.1| | PREDICTED: semaphorin-3F-like isoform X3 [Python bivittatus] | 0.0 |
| habu1_s1426_g05136.t1 | gi|602645673|ref|XP_007429274.1| | PREDICTED: semaphorin-3F-like isoform X6 [Python bivittatus] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 13.7 |
| Venom grand-1 | 2.7 |
| Pit, infrared sensing | 9.8 |
| Nose | 3.4 |
| Brain-1 | 0.9 |
| Eye | 3.5 |
| fetal fibroblast | 0.8 |
| venom gland-2 | 1.2 |
| Brain-2 | 0.9 |
| Spleen | 5.2 |
| Lung | 4.9 |
| Liver | 0.6 |
| Kidney | 2.0 |
| Pancreas | 5.5 |
| Small intestine | 3.3 |
| Large intestine | 4.4 |
| Stomach | 1.6 |
| heart | 0.9 |
| ovary | 0.6 |
| cheek muscle | 1.4 |
Transcript
| Transcript ID | habu1_s1426_g05136.t1 |
|---|---|
| Definition | - |
>habu1_s1426_g05136.t1 acatgtccctccctcctcacaaccgcttgccccgctggattagaagtacatcccggagaaattttcctgggcacagaaga gctgactggaactaaacccggggagttggtctcggagcggagagctaccgccgggattgaccccgccatggtgccctggg caacgctgctcctattggggctgttgttctgctgctgtttgggccacagcagccagacgggagcgccccgggtctacctc acctacaaagaattgttagagagccgcactgctcgtcctttcagcttcaactttaacacaagcgattatcgcatcttgtt ggtggaccaagaccaggaacgtctctacttgggggcacgagattttctggtggccttggatcttcacaacatcaacaagg agccactcattatccattggccagcattgccaaatcaggagaatgagtgtcgcttggcaggaaaagggcagagaggcgaa tgtttcaactacatacggcttatggaacccttgaaccgtactcatctctacgcctgtggaacaggagcttatcacccagt ctgcatccttatcaatcgtggttggcgctctgaagaatatctgttccgcacagtgcctcattcactggaaccaggcaagg ggaaatgtccttacgacccccggcagtccagcatggctgtgcttgtcaatagcacactgtatgctggagttcatgtggat ttcatgggcaccgatgctgctttgttccggaccatgggaccgcgcccagctgtacgtacggagcaacacgattcccgatg gctctatgaccctgttttcctccaagcccacgtcattcccgacagctccgaccacagcgatgacaagctctacttctttt tccgggaaaaagcactggagggtgccgtggggcctgccgttctcgctcgggtgggacgggtgtgcctgaacgacgatggg ggactgcgctccctgttgaacaagtggacgacgttccttaaagctcgtctcgtgtgctccgtgattggagaggatggcgt ggagactttctttgatgagctgcgtgacgtcttccttttgccgactcaggatgagaagcatcccttgctctatggggtct tctccaccctggggtcagtgttccgtggctcggcagtctgtgtttactccatggctgacatccgcacggtcttcaatggg ccctttgcccacaaggaaggacacaactaccagtgggggccatatacaggacgtgtgccctaccctcgtcctggagcctg cccgggaggaaccttcaccccaggccttcgctccacacgtgagttttctgatgagctggtaacctttgtgcgggcccatc ccttgatgttccatgcagtctaccccctccagcgccgtcccctcctggtgaggaccaatgtcccctacagcttcaccacc ttggctgtggatcttgtggatgcggtggatgggcgctacgaggtgctcttccttggcacagaccaaggtacagtgcagaa ggtgattgtgttgcccaaggaacaagggatactggaagaactgactctggaggaagttgaggtgttcagggtaccagctc cagtgaagacactgtggatatcctcaaagcgacaacagctctatgtctcctctgacatgggtgtttcccagctgagcctc caccgatgccgggagtatggtgaagcctgtgctgattgctgtctggctcgggatccctactgtgcatgggatgggcaacg ttgtgcccgctacagccacacagccaaaaggaggagccgtcgccaggatatcaagcatggcgatcccctcaggcagtgcc gtggttttaacgctaaggaacagcaattaagtgaacagattcaatacggactagaaggaggaagcgtatttctggagtgt gaaccccgatctccccacgcgaccatcaagtggcttatgcagacagacgactctaccaaacgcaaagtgttgccccggga tcgcatactgcttcagacacctcagggtgtgcttttaggcccagtgatgccatctgacagtgggctctaccaatgcatag gcaccgagaaccgctttcgccacacactgcggcggcttcgtctgcatgtccttccgcgtgctttgctggagggggccatc agctctgaagagacacccaccctgggtatttgcgagagctattggcaacagttcaacagagcccaagacatccagcacag ccagggtggccaccagtcccatgctggacccagcctgtggggttctgaacagcagtccaactggtacagagctactcagc agccctcactgaactggaccaccagcagtccccatcactcccaaagcagcagcagcggccgccgtcgccatcatcaccat caccgctccaagccgtgggcagggcatcgaacgccacctcgaagttgagctggacggaagacagtggtgggcagggagag gctttgacctaatctttggcgtgagagaatgacattccagtggactctttgtaagagctgagtgaatccagagatgggga aaaacctctttgcttcctccagatggcggggacaacactattgctaacaaagtgtgtggtgtggtgtgtccaggctaatt ccagggttttcaggaccagggcttactggctctttcctgaaatggaaaggtgaccagtgctaattgcaaaggctttggct ttaggattcttttttttttcttttttaagtattcattcccaaaccttatgccatcctctcacatcacagaaggaaaactg gggggcttccttcaacattaacgccaccattttattaaccctatgctgcagaagcacgtagcagaaaataaaataccagt ttattttctaaaca |
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Protein
| Protein ID | habu1_s1426_g05136.t1 |
|---|---|
| Definition | - |
>habu1_s1426_g05136.t1 MVPWATLLLLGLLFCCCLGHSSQTGAPRVYLTYKELLESRTARPFSFNFNTSDYRILLVDQDQERLYLGARDFLVALDLH NINKEPLIIHWPALPNQENECRLAGKGQRGECFNYIRLMEPLNRTHLYACGTGAYHPVCILINRGWRSEEYLFRTVPHSL EPGKGKCPYDPRQSSMAVLVNSTLYAGVHVDFMGTDAALFRTMGPRPAVRTEQHDSRWLYDPVFLQAHVIPDSSDHSDDK LYFFFREKALEGAVGPAVLARVGRVCLNDDGGLRSLLNKWTTFLKARLVCSVIGEDGVETFFDELRDVFLLPTQDEKHPL LYGVFSTLGSVFRGSAVCVYSMADIRTVFNGPFAHKEGHNYQWGPYTGRVPYPRPGACPGGTFTPGLRSTREFSDELVTF VRAHPLMFHAVYPLQRRPLLVRTNVPYSFTTLAVDLVDAVDGRYEVLFLGTDQGTVQKVIVLPKEQGILEELTLEEVEVF RVPAPVKTLWISSKRQQLYVSSDMGVSQLSLHRCREYGEACADCCLARDPYCAWDGQRCARYSHTAKRRSRRQDIKHGDP LRQCRGFNAKEQQLSEQIQYGLEGGSVFLECEPRSPHATIKWLMQTDDSTKRKVLPRDRILLQTPQGVLLGPVMPSDSGL YQCIGTENRFRHTLRRLRLHVLPRALLEGAISSEETPTLGICESYWQQFNRAQDIQHSQGGHQSHAGPSLWGSEQQSNWY RATQQPSLNWTTSSPHHSQSSSSGRRRHHHHHRSKPWAGHRTPPRS |
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