Gene
| Gene Model ID | habu1_s1426_g05140 |
|---|---|
| Locus | habu1_scaffold1426 : 1310305 ... 1327303 : + |
| To GenomeBrowser | habu1_scaffold1426:1310305..1327303 |
| Genes list of scaffold | habu1_scaffold1426 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s1426_g05140.t1 | 1 | 1 | Rad60-SLD | 2 | 71 | 2.9e-10 | 39.6 | 1.5e-13 | 4.4e-10 | 39.1 |
| habu1_s1426_g05140.t1 | 1 | 1 | ubiquitin | 6 | 73 | 1.3e-18 | 66.1 | 7.3e-22 | 2.2e-18 | 65.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s1426_g05140.t1 | gi|602645689|ref|XP_007429282.1| | PREDICTED: ubiquitin-like protein 4A [Python bivittatus] | 0.0 |
| habu1_s1426_g05140.t1 | gi|327261901|ref|XP_003215765.1| | PREDICTED: ubiquitin-like protein 4A [Anolis carolinensis] | 0.0 |
| habu1_s1426_g05140.t1 | gi|591356255|ref|XP_007072428.1| | PREDICTED: ubiquitin-like protein 4A [Chelonia mydas] | 0.0 |
| habu1_s1426_g05140.t1 | gi|530567322|ref|XP_005280186.1| | PREDICTED: ubiquitin-like protein 4A [Chrysemys picta bellii] | 0.0 |
| habu1_s1426_g05140.t1 | gi|591360319|ref|XP_007055082.1| | PREDICTED: ubiquitin-like protein 4A-like [Chelonia mydas] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 6.4 |
| Venom grand-1 | 8.6 |
| Pit, infrared sensing | 7.0 |
| Nose | 6.3 |
| Brain-1 | 3.0 |
| Eye | 4.2 |
| fetal fibroblast | 12.0 |
| venom gland-2 | 11.6 |
| Brain-2 | 3.2 |
| Spleen | 5.3 |
| Lung | 6.0 |
| Liver | 7.0 |
| Kidney | 4.5 |
| Pancreas | 7.0 |
| Small intestine | 5.1 |
| Large intestine | 5.4 |
| Stomach | 6.9 |
| heart | 8.9 |
| ovary | 7.9 |
| cheek muscle | 7.8 |
Transcript
| Transcript ID | habu1_s1426_g05140.t1 |
|---|---|
| Definition | - |
>habu1_s1426_g05140.t1 cgaccatagagatgtcgcctctcttttccgtctctctatgatatcctgacgtatgattctcgtagacacaggagccggaa tgcgttgtgttgacccccctactggaccgctctgtttttggttgttcctctagctgtctatgattctcttaaaggagccg cttggcttccagagttgcggggtcccgagatgttacttacggtgaaggcgctccagggccgggaatgcagcctccaggtc tcccctgatgagcgcatctcctctctcaagcgtctggtctcagaaaagctgaatgtcccaatctctcagcagcgcttact tttcaaaggcaaagctctggcagatgagcaccgtttgtccgattactctattggacccgagtcaaagcttaaccttgtaa tcaagcctttggagaaggcatcacctgaggatcctagcagcagagctggcttcccacagacttcaaccatctggcacatg ctggcccaaattctgagcaggcattacagtgtgacggatgctgagaaagtgctggagcagatgcagaaggattatgagcg gagccttcgattgctgagtctagatgacatagagcgtttagccacacgcttgcttcatcctgaacagggacgatcccctc gttcccataagcctgcggatgccatcccttcgcggtgaactgaaaattccttttccatcatcaacattggccaagattgc cttgggttccctggccccagatcctgagcctcgcaaaggaggaatcaccaaagaactgaatgtgacagacaacattttac atgtgcaatggagagccgaagaagctaggatcctgcgtgtttcctttaactccttcttggagcatctctccttggtagtg gaaactatggatctgtttgggccacccatggcttgataaactgttatactaaatcataaaaaaatatggattttgttgga taccggacttagccattcactgctgatttcagagaaggcattggacagtccttccttggaaccaggatggaaaaaaatgt gtacctgcactatggtgctcaagaacccgatagaccattgtgcaccaagaagtaggcaagtttagaactgccttggcctt tttccccctaacctgatgttctccagatgttttagacttcaacttccacaggccacaaggttaaggttttacgttgggaa gataaattttaacaaaagttatgtttatatgatatgtatttttattatattaccccattcatcttacaccctgcatgtgt ttactaataaaatatttttgactatgggagaaa |
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Protein
| Protein ID | habu1_s1426_g05140.t1 |
|---|---|
| Definition | - |
>habu1_s1426_g05140.t1 MLLTVKALQGRECSLQVSPDERISSLKRLVSEKLNVPISQQRLLFKGKALADEHRLSDYSIGPESKLNLVIKPLEKASPE DPSSRAGFPQTSTIWHMLAQILSRHYSVTDAEKVLEQMQKDYERSLRLLSLDDIERLATRLLHPEQGRSPRSHKPADAIP SR |
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