Gene
| Gene Model ID | habu1_s1426_g05141 |
|---|---|
| Locus | habu1_scaffold1426 : 1364555 ... 1429294 : - |
| To GenomeBrowser | habu1_scaffold1426:1364555..1429294 |
| Genes list of scaffold | habu1_scaffold1426 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| plexin-a3- partial | GO:0005622 GO:0016021 GO:0017154 GO:0021612 GO:0021637 GO:0021766 GO:0021785 GO:0021860 GO:0048843 GO:0050919 GO:0051495 GO:1902287 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s1426_g05141.t1 | 1 | 1 | Sema | 30 | 287 | 2.1e-24 | 85.8 | 8.7e-28 | 3.2e-24 | 85.2 |
| habu1_s1426_g05141.t1 | 2 | 1 | PSI | 379 | 426 | 7.2e-10 | 38.8 | 3.4e-08 | 0.00012 | 22.0 |
| habu1_s1426_g05141.t1 | 2 | 2 | PSI | 528 | 568 | 7.2e-10 | 38.8 | 3.0e-08 | 0.00011 | 22.2 |
| habu1_s1426_g05141.t1 | 3 | 1 | TIG | 582 | 673 | 2.7e-26 | 91.3 | 3.7e-11 | 1.4e-07 | 31.4 |
| habu1_s1426_g05141.t1 | 3 | 2 | TIG | 680 | 742 | 2.7e-26 | 91.3 | 4.6e-11 | 1.7e-07 | 31.1 |
| habu1_s1426_g05141.t1 | 3 | 3 | TIG | 795 | 861 | 2.7e-26 | 91.3 | 2.6e-10 | 9.7e-07 | 28.7 |
| habu1_s1426_g05141.t1 | 1 | 1 | Plexin_cytopl | 950 | 1499 | 0.0 | 820.0 | 0.0 | 0.0 | 819.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s1426_g05141.t1 | gi|602645692|ref|XP_007429283.1| | PREDICTED: plexin-A3-like, partial [Python bivittatus] | 0.0 |
| habu1_s1426_g05141.t1 | gi|637254890|ref|XP_008120631.1| | PREDICTED: plexin-A3 [Anolis carolinensis] | 0.0 |
| habu1_s1426_g05141.t1 | gi|532056066|ref|XP_005370745.1| | PREDICTED: plexin-A3-like isoform X2 [Microtus ochrogaster] | 0.0 |
| habu1_s1426_g05141.t1 | gi|569009867|ref|XP_006527963.1| | PREDICTED: plexin-A3 isoform X1 [Mus musculus] | 0.0 |
| habu1_s1426_g05141.t1 | gi|524974246|ref|XP_005086963.1| | PREDICTED: plexin-A3 isoform X2 [Mesocricetus auratus] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 5.7 |
| Venom grand-1 | 0.4 |
| Pit, infrared sensing | 5.6 |
| Nose | 1.4 |
| Brain-1 | 3.3 |
| Eye | 1.3 |
| fetal fibroblast | 6.9 |
| venom gland-2 | 0.1 |
| Brain-2 | 2.5 |
| Spleen | 0.4 |
| Lung | 0.6 |
| Liver | 0.3 |
| Kidney | 0.3 |
| Pancreas | 0.1 |
| Small intestine | 0.3 |
| Large intestine | 2.1 |
| Stomach | 0.8 |
| heart | 0.0 |
| ovary | 12.9 |
| cheek muscle | 0.2 |
Transcript
| Transcript ID | habu1_s1426_g05141.t1 |
|---|---|
| Definition | - |
>habu1_s1426_g05141.t1 ggcggggagaatcggagtgaggacgaatggagcaggcacgtcggcacctcgcatcctccccttctcttttccgagcagac gcggtcccttctgatactctctcgctctaccctgcctttgacatctactacgtgtctgcctttgtgtctggcggttttgt gtacttcctcactttgcagcttgacactgctcagacacctctcgagcctgctggaggtcccgttggccctggtgtgacgg gtggggagcgcttcttttcatccaagattgtgcgcctgtgtgccaatgacacagagttctactcttacgtggaatttcct ctgggctgctccaaggacggggtggaataccgtctggtgcaagcggctcagctggccaaagccggcagacaattggccca gtcgctgggcattgcagaagggcaagatgtgctttatgccgccttctcgcaaggccagaagaacagggcagcaccacccc gggagagcctgctctgccttttcacgctggatgaagtcaatcagcgcatccgtgagcgtatccagtcatgctaccgtggt gaagggcgactctctctaccgtggcttctcaacaaagagttgccctgcatcaacacgcccatgcagatcaatggcaattt ctgtgggttggtactgaaccaacccctaggagggctgcaggtcatcgagggacgcccgttgcttcaggaacagaccgagg gcatggccagtgttgctgcttatacctatagtggccattcagtcgtcttcattggaacccgtgctggcaacctgaagaag gttcgtgtggacaatccagatgaggcccatctttatgagtctgtgccagtgatgcctggagagcctgtgctgcgtgacat ggtcctgagtcctgaccagcggtacctctatttgctcagccagagacagcttcagcttacggtccacaatgtcccagacc tgagtgctggtgtgacttgctcctttgagggccttggggagagcgagggacagcttcaggtagatggagagatccactgc ctttcacctactttgagggatgagccccctggagaatatggtgatgtacgaactgttaagatccaacttctgtccaagga aactggcatggaatttgccagtacaaactttgtattttatgattgcagccttctacgcacgtgcttgtcctgtgtcagca gccactatccgtgccactggtgtaaatacaggcatacatgtacccacaatgtggccaagtgcttcttcctagagggccga gtcaacactgctgagggctgcccagagctccttgctggtggggagatcttgattcctgtgggagtgttacaacccattac cctgcgtgccaagaaccttccacaacctcagtcaggccagaagaattatgaatgtgtcttgggaatccaaggtcgccaac agcgggtgccagctgtacgcttcaactccagcagcgtacagtgccagaatacctcgtattggtacgatggtgaggagttg ggggaactccctctggactttgatgtcatttgggatggagattttgccattgacaagccaccaggattcaaagctctctt gtacaagtgttcggcccagcgctctagctgtggactgtgcctcaaatcagatccacgttatgagtgtggttggtgtgtac ctgaacgtcgttgccttttgcgtcctcactgcccagcttccaggcaaaattgggtgccacccggtcggcgtggggcacgt tgtactcaccctcgtattacacaggtattgccactgactggtcccaaggaaggtgggactcgggtgacagtttggggtga gaacctggggcttcatttctatgaggtcggtgtacgggtagcaggtgtccgttgtagctctctccctgcagaatacatca gcgctgagaggcgtagtggaggggagatcgtctgcctgtctcccccctcggcatcaggcccaggtcctgccaacctcagt cttcgcattgaccgtgccaacattagcacaaacgggacggtcttcttccgctatagtcctgacccagtggtcacagccgt agagcctgcttggagtattgcgaatggtagcaccagcctcacagtgagtgggacccacctcttaaccattcaggaaccac gggttcgggctgcttatggcgggatagaaaccatcaatagttgccaggtgctaaatgactccataatgttgtgcaaggcc ccgggcattatacctcgggagcaggccctgccccttggaggtgctcaccctgatgagtttggcttcctcttggatgatgt ggctgccacccggaccttgaaccgttctgcttttacatactacccagaccctacttttgagacctttgggcccagcggca tactggaaattaaacccggatcccatgttgtcctcaagggccggaatctgatccctgcagtttccggcagtacacgactc aactacacagtgctgattggtggagaaccttgcaccctgactgtctcagaaacccagttgttgtgtgattcgccaagcca aactggagagcagccagtcatgatcctggtgggaggtctatccttctctccggggatcctgcacatctatcctgaggcag ctttgcctttgccagctcttgtgggcttaggagcaggaggaagcctccttttgggggccatcattggggtgctggtagcc tataaacggaagacccgggatgcagatcggactctgaagcgcttgcagctgcagatggacaacttagagtcacgggtggc tctggaatgcaaggaagcttttgctgagttgcagacagatattaacgagctgacaaacaacatggatggtgtgaagatcc catttctggattatcggacatatgcaaggcgtgtgctctttccaggggtggatgatcacccggcacttcaagaaaccagt acaccaccaagcacagagaaagggctccgtctctttgggcagttgctacacactcggcctttcctgctgaccttcatcca caccctggaaggccagcgaggtttctccatgcgagatagaggcgctgttgcttctctgacgatggtggccctgcagggca ggcttgactatgctactggggtgctgaagcagctgctggctgacctcattgagaagaatctgcagaaccgtgcccacccc aagctgttgctccgtcggacagagtcagtggctgagaaaatgttgaccaattggtttacttttctgctgcataggttcct gaaggaatgtgctggggagccattattcatgctgttctgtgccatcaaacaacagatggagaaaggcccaatagatgcca tcacaggcgaggcacgctactcgttgagcgaggacaagctcattcgccagcaaattgattacaagaccttgacattatta tgcacccctcctgagccacctgggggacctacagtgcctgttaaagtattaaactgtgattcggtgacacaagcgaagga gaagcttctagatgccgtatatcgaggcgtaccctattcgcagcggccacgagctgaagacatggagttagagtggtgtc agggtgctgggggacggaccgtcttgcaggatgaagacgccacaagtaaaattgaaggagactggaagcggctcaacaca ttgggacattatcaggtggcagatggctccacggtggccttggttcctaggcaggcatcaggctacaatattgcaagctc cttcactttcacccattcgctgagtcgctatgagagtttgttgcgcacctccagcagtccagagagcttgcgttcacgag ctcccatccttactccagatcaagactcaggcacccgcctctggcatctggtcaagaaccatgagcatctcggagacccc aaagaaggggagcgagggagcaagatggtttctgagatctacctcacccggctccttgccaccaagggcacattgcaaaa gtttgttgatgacctgtttgagacagtgttcagcacagcacaccgggccagtgcccttcccttgcccatcaaatacatgt ttgatttcctggatgaacaagcagagcggagacagattggggatgctgatgttcgacatacctggaaaagcaactgtttg cccttgaggttttgggtgaatgtcatcaagaatccacaatttgtttttgatattcacaagagcagcatcacggacgcttg cctctcggttgtggcccagaccttcatggactcgtgctctacctctgagcaccgcctaggcaaggattccccttcgacaa agctattatatgccaaggatattcctgtttataaaggctgggtggaaaggtactaccgggacatcaccaagatggcttcc attagtgaccaagacatggatgcctacctagtagaacaatcccgtcagcatgcaggggaatttaacacattgggtgcact gggagagctctacagctatgtgggaaggtaccgggatgagatcctgactgcgttggaacgggatgctgcctgccggaaac acaaactgaggctgaagctggagcaagtcaccactcttgtttcgggaacaagctgaggatgctggagggggcaggagggc aaagggagcgggcagcaggcatccaggataggtgcctccaaagggactctacctccaacttggcttgcggcccaacaaag gggaacagacttgacctttttaacctcctggggggcaagagacctgtgaccttttcccctggggtggcagaaagtcgctg tggtgcctcccctccccagccttcagtctggaagcaataacaagcacccgctcctctgcctctgacttgggaggggccac ccagaataagcaatgaggttggggtgcagcctgatcatgccccctccccctcaagctggcagctaaatggaaaccccttc accccaaatgtttgtggacccctctcttcagtcatcccgatcatctccccagtcccccactccttgttggtagctggtgg aatctgcccttgttctgtttttggtaaccatggcaattggatatttttaatcttacctgacagtgctctccnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncccacccacccacc ccaacccttttgttcttagagtctgtgtaaatatttgcactgcagcctggagggatttgatccccccctttcctccccaa aaataaaataaaataaaaataagaataagaatccccctt |
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Protein
| Protein ID | habu1_s1426_g05141.t1 |
|---|---|
| Definition | - |
>habu1_s1426_g05141.t1 MEQARRHLASSPSLFRADAVPSDTLSLYPAFDIYYVSAFVSGGFVYFLTLQLDTAQTPLEPAGGPVGPGVTGGERFFSSK IVRLCANDTEFYSYVEFPLGCSKDGVEYRLVQAAQLAKAGRQLAQSLGIAEGQDVLYAAFSQGQKNRAAPPRESLLCLFT LDEVNQRIRERIQSCYRGEGRLSLPWLLNKELPCINTPMQINGNFCGLVLNQPLGGLQVIEGRPLLQEQTEGMASVAAYT YSGHSVVFIGTRAGNLKKVRVDNPDEAHLYESVPVMPGEPVLRDMVLSPDQRYLYLLSQRQLQLTVHNVPDLSAGVTCSF EGLGESEGQLQVDGEIHCLSPTLRDEPPGEYGDVRTVKIQLLSKETGMEFASTNFVFYDCSLLRTCLSCVSSHYPCHWCK YRHTCTHNVAKCFFLEGRVNTAEGCPELLAGGEILIPVGVLQPITLRAKNLPQPQSGQKNYECVLGIQGRQQRVPAVRFN SSSVQCQNTSYWYDGEELGELPLDFDVIWDGDFAIDKPPGFKALLYKCSAQRSSCGLCLKSDPRYECGWCVPERRCLLRP HCPASRQNWVPPGRRGARCTHPRITQVLPLTGPKEGGTRVTVWGENLGLHFYEVGVRVAGVRCSSLPAEYISAERRSGGE IVCLSPPSASGPGPANLSLRIDRANISTNGTVFFRYSPDPVVTAVEPAWSIANGSTSLTVSGTHLLTIQEPRVRAAYGGI ETINSCQVLNDSIMLCKAPGIIPREQALPLGGAHPDEFGFLLDDVAATRTLNRSAFTYYPDPTFETFGPSGILEIKPGSH VVLKGRNLIPAVSGSTRLNYTVLIGGEPCTLTVSETQLLCDSPSQTGEQPVMILVGGLSFSPGILHIYPEAALPLPALVG LGAGGSLLLGAIIGVLVAYKRKTRDADRTLKRLQLQMDNLESRVALECKEAFAELQTDINELTNNMDGVKIPFLDYRTYA RRVLFPGVDDHPALQETSTPPSTEKGLRLFGQLLHTRPFLLTFIHTLEGQRGFSMRDRGAVASLTMVALQGRLDYATGVL KQLLADLIEKNLQNRAHPKLLLRRTESVAEKMLTNWFTFLLHRFLKECAGEPLFMLFCAIKQQMEKGPIDAITGEARYSL SEDKLIRQQIDYKTLTLLCTPPEPPGGPTVPVKVLNCDSVTQAKEKLLDAVYRGVPYSQRPRAEDMELEWCQGAGGRTVL QDEDATSKIEGDWKRLNTLGHYQVADGSTVALVPRQASGYNIASSFTFTHSLSRYESLLRTSSSPESLRSRAPILTPDQD SGTRLWHLVKNHEHLGDPKEGERGSKMVSEIYLTRLLATKGTLQKFVDDLFETVFSTAHRASALPLPIKYMFDFLDEQAE RRQIGDADVRHTWKSNCLPLRFWVNVIKNPQFVFDIHKSSITDACLSVVAQTFMDSCSTSEHRLGKDSPSTKLLYAKDIP VYKGWVERYYRDITKMASISDQDMDAYLVEQSRQHAGEFNTLGALGELYSYVGRYRDEILTALERDAACRKHKLRLKLEQ VTTLVSGTS |
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