Gene
| Gene Model ID | habu1_s1426_g05144 |
|---|---|
| Locus | habu1_scaffold1426 : 1491260 ... 1503354 : - |
| To GenomeBrowser | habu1_scaffold1426:1491260..1503354 |
| Genes list of scaffold | habu1_scaffold1426 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| tafazzin isoform x1 | EC:2.3.1.23 GO:0005634 GO:0005739 GO:0005829 GO:0007519 GO:0016020 GO:0030097 GO:0032049 GO:0032981 GO:0042407 GO:0042775 GO:0042967 GO:0047184 GO:0048738 GO:0060048 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s1426_g05144.t2 | 1 | 1 | Acyltransferase | 42 | 184 | 1.5e-38 | 131.2 | 2.59941e-42 | 2.0e-38 | 130.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s1426_g05144.t2 | gi|395547481|ref|XP_003775170.1| | PREDICTED: tafazzin isoform X1 [Sarcophilus harrisii] | 0.0 |
| habu1_s1426_g05144.t2 | gi|471418294|ref|XP_004390644.1| | PREDICTED: tafazzin isoform X1 [Trichechus manatus latirostris] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 14.3 |
| Venom grand-1 | 46.4 |
| Pit, infrared sensing | 23.3 |
| Nose | 17.5 |
| Brain-1 | 12.7 |
| Eye | 24.5 |
| fetal fibroblast | 8.1 |
| venom gland-2 | 38.0 |
| Brain-2 | 12.1 |
| Spleen | 25.9 |
| Lung | 32.9 |
| Liver | 35.0 |
| Kidney | 19.6 |
| Pancreas | 51.3 |
| Small intestine | 24.8 |
| Large intestine | 26.1 |
| Stomach | 26.2 |
| heart | 22.2 |
| ovary | 21.7 |
| cheek muscle | 33.7 |
Transcript
| Transcript ID | habu1_s1426_g05144.t1 |
|---|---|
| Definition | - |
>habu1_s1426_g05144.t1 ccgcaggagaaagaagagaacaggaggagcatttaatcacatcggggaagtggagggacagctgacagcattgcctctag gctggggatcaccagggatgggaagatgcccctggaggtgaaatggccatttcctcaggccccaagtctggcatggaatt tggccagcagggtgatcatgggattggtgggtacctatagctgcttctggaccagatatgtaaacaagctgaatatccat aatgaagaagttctttatgacctaatcgagaagcgccaaccaggaacccctctcttgactgtctgcaaccatcagtcctg catggatgacccacatctttggggtatcctgagattacgacatgtctggaacttgcagaagatgcggtggactccaacag ctgcagatatctgctttaccaaggagctgcattctcatttctttagccttgggcgatgtgttcctgtctgtcggggagat ggagtctaccagaaaggcatggactatatactagagaagctaaaccgtggtgactgggtgcacatgttcccagaaggtaa agtgaacatgacccaggagttcatgcgcttcaaatggggaatgaatgatgtactccccaatacacccccttatgtgcccc aggttggacagaaaattaccgtgttaattgggaagccattcagcgtccgcccattgctagagcgtctgcgggcagaaaac aagtcggcgatggagatgcgcaaagccctgactgatttcattcaggaggagatccaggccctaaaggaacaggctgagag actgcataagactttcaagctacagagctagtgttgactagactaagcagaagctctgttattgaaacatggattatgca gttgtggtctatggcaagaaatgtagtctttgcacggactacttttaactcatcgcttttaagttaaattttctcatttc tccacctaccgataccatccacacaccctgctgtagatggagtggcattgcatgcagaagattggatgaaggcttcaata ccccttgttgagcttcaggctcttctgactgtactgctttggtgtctgcctcccaaagggagggacttgcaatggctact gtatgtaattccctcttgctagaacctagaggtgctgggataattgctggtaatgcaagaacaggaagaggaagggatgg gggagggaaatctgtctccatcctcttgtagatatctccactcattggaggaatacataatgcattttgtaaatttcctc tttttgtagaatattggtttgcaaatggttttatacttgaaacttccccaataaatgattcacacctgttgcagcctggg ttaagctccgaagtgccagggattaaagttttctgcacataattcaggtatcttcatagaggaaagtgttttatagtacc tagcaaaagaccctccatttgccaatagatacaccaaatattgtaggttgtgaaaaacaattaaggcactattaaaaaca agcaaaacaagttggcat |
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| Transcript ID | habu1_s1426_g05144.t2 |
| Definition | - |
>habu1_s1426_g05144.t2 ccgcaggagaaagaagagaacaggaggagcatttaatcacatcggggaagtggagggacagctgacagcattgcctctag gctggggatcaccagggatgggaagatgcccctggaggtgaaatggccatttcctcaggccccaagtctggcatggaatt tggccagcagggtgatcatgggattggtgggtacctatagctgcttctggaccagatatgtaaacaagctgaatatccat aatgaagaagttctttatgacctaatcgagaagcgccaaccaggaacccctctcttgactgtctgcaaccatcagtcctg catggatgacccacatctttggggtatcctgagattacgacatgtctggaacttgcagaagatgcggtggactccaacag ctgcagatatctgctttaccaaggagctgcattctcatttctttagccttgggcgatgtgttcctgtctgtcggggagat ggagtctaccagaaaggcatggactatatactagagaagctaaaccgtggtgactgggtgcacatgttcccagaaggtaa agtgaacatgacccaggagttcatgcgcttcaaatggggtattgggcgtcttctggctgagtgccgtctgcaccccatta tactgccactctggcatgtaggaatgaatgatgtactccccaatacacccccttatgtgccccaggttggacagaaaatt accgtgttaattgggaagccattcagcgtccgcccattgctagagcgtctgcgggcagaaaacaagtcggcgatggagat gcgcaaagccctgactgatttcattcaggaggagatccaggccctaaaggaacaggctgagagactgcataagactttca agctacagagctagtgttgactagactaagcagaagctctgttattgaaacatggattatgcagttgtggtctatggcaa gaaatgtagtctttgcacggactacttttaactcatcgcttttaagttaaattttctcatttctccacctaccgatacca tccacacaccctgctgtagatggagtggcattgcatgcagaagattggatgaaggcttcaataccccttgttgagcttca ggctcttctgactgtactgctttggtgtctgcctcccaaagggagggacttgcaatggctactgtatgtaattccctctt gctagaacctagaggtgctgggataattgctggtaatgcaagaacaggaagaggaagggatgggggagggaaatctgtct ccatcctcttgtagatatctccactcattggaggaatacataatgcattttgtaaatttcctctttttgtagaatattgg tttgcaaatggttttatacttgaaacttccccaataaatgattcacacctgttgcagcctgggttaagctccgaagtgcc agggattaaagttttctgcacataattcaggtatcttcatagaggaaagtgttttatagtacctagcaaaagaccctcca tttgccaatagatacaccaaatattgtaggttgtgaaaaacaattaaggcactattaaaaacaagcaaaacaagttggca t |
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Protein
| Protein ID | habu1_s1426_g05144.t1 |
|---|---|
| Definition | - |
>habu1_s1426_g05144.t1 MPLEVKWPFPQAPSLAWNLASRVIMGLVGTYSCFWTRYVNKLNIHNEEVLYDLIEKRQPGTPLLTVCNHQSCMDDPHLWG ILRLRHVWNLQKMRWTPTAADICFTKELHSHFFSLGRCVPVCRGDGVYQKGMDYILEKLNRGDWVHMFPEGKVNMTQEFM RFKWGMNDVLPNTPPYVPQVGQKITVLIGKPFSVRPLLERLRAENKSAMEMRKALTDFIQEEIQALKEQAERLHKTFKLQ S |
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| Protein ID | habu1_s1426_g05144.t2 |
| Definition | - |
>habu1_s1426_g05144.t2 MPLEVKWPFPQAPSLAWNLASRVIMGLVGTYSCFWTRYVNKLNIHNEEVLYDLIEKRQPGTPLLTVCNHQSCMDDPHLWG ILRLRHVWNLQKMRWTPTAADICFTKELHSHFFSLGRCVPVCRGDGVYQKGMDYILEKLNRGDWVHMFPEGKVNMTQEFM RFKWGIGRLLAECRLHPIILPLWHVGMNDVLPNTPPYVPQVGQKITVLIGKPFSVRPLLERLRAENKSAMEMRKALTDFI QEEIQALKEQAERLHKTFKLQS |
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