Gene
| Gene Model ID | habu1_s1426_g05146 |
|---|---|
| Locus | habu1_scaffold1426 : 1537640 ... 1542164 : - |
| To GenomeBrowser | habu1_scaffold1426:1537640..1542164 |
| Genes list of scaffold | habu1_scaffold1426 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| 60s ribosomal protein l10 | GO:0003735 GO:0005840 GO:0006412 GO:0042254 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s1426_g05146.t1 | 1 | 1 | Ribosomal_L16 | 5 | 165 | 5.4e-32 | 110.3 | 4.5e-36 | 6.6e-32 | 110.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s1426_g05146.t1 | gi|602627156|ref|XP_007420527.1| | PREDICTED: 60S ribosomal protein L10 [Python bivittatus] | 0.0 |
| habu1_s1426_g05146.t1 | gi|327264270|ref|XP_003216937.1| | PREDICTED: 60S ribosomal protein L10 isoform X2 [Anolis carolinensis] | 0.0 |
| habu1_s1426_g05146.t1 | gi|620976179|ref|XP_007667845.1| | PREDICTED: 60S ribosomal protein L10 [Ornithorhynchus anatinus] | 0.0 |
| habu1_s1426_g05146.t1 | gi|126341965|ref|XP_001362654.1| | PREDICTED: 60S ribosomal protein L10 [Monodelphis domestica] | 0.0 |
| habu1_s1426_g05146.t1 | gi|562878664|ref|XP_006167047.1| | PREDICTED: 60S ribosomal protein L10 [Tupaia chinensis] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 626.7 |
| Venom grand-1 | 2632.4 |
| Pit, infrared sensing | 1254.1 |
| Nose | 715.1 |
| Brain-1 | 217.0 |
| Eye | 731.4 |
| fetal fibroblast | 701.4 |
| venom gland-2 | 2032.2 |
| Brain-2 | 144.7 |
| Spleen | 1100.2 |
| Lung | 1112.0 |
| Liver | 2495.6 |
| Kidney | 1601.3 |
| Pancreas | 2277.3 |
| Small intestine | 1679.1 |
| Large intestine | 933.6 |
| Stomach | 1589.4 |
| heart | 861.1 |
| ovary | 231.4 |
| cheek muscle | 1200.7 |
Transcript
| Transcript ID | habu1_s1426_g05146.t1 |
|---|---|
| Definition | - |
>habu1_s1426_g05146.t1 ccactttctttcctttcggcgagacccgcaatcatgggccgccgaccagcacgttgttatcgatactgcaagaataagcc ttatcctaagtcccgcttctgcaggggtgttcctgatcccaagatcaggatatttgatctgggcaggaagaaggcgaagg ttgatgagtttccactctgtgggcacatggtgtcagatgaatatgagcaattgtcatcggaagctctagaagctgctcgt atctgcgccaacaaatacatggtgaagagttgtggcaaggatggttttcacatccgtgtacgcctacaccccttccatgt catccgcatcaacaaaatgttatcctgtgctggagctgacaggctccagactggaatgcgtggtgcttttggcaaacctc agggcactgtggcccgtgtgcacattggccaggtcatcatgtccatccgcaccaaggtgcaaaacaaggagcatgtaatt gaagcattgcgcagagccaaattcaaatttcctggacgtcagaagatccatatttctaagaaatggggcttcaccaaatt caatgctgatgagtttgaagaaatggtgtctgagaagcgccttatccctgatggctgtggagttaaatacatacccaaca ggggtcctctagataaatggcgtgccttacatgcagcatgaaagtctgatctaactagaggacaactgtgttaatttctt gacagaaaaggcatcaaaataaacagctctgtatacctactgtgtgatcgttactgctaggggctccaagatcactgcag tcatgaaattaaaagacgtccctgtcaggcctataaaagtaaaagaacttttcacttca |
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Protein
| Protein ID | habu1_s1426_g05146.t1 |
|---|---|
| Definition | - |
>habu1_s1426_g05146.t1 MGRRPARCYRYCKNKPYPKSRFCRGVPDPKIRIFDLGRKKAKVDEFPLCGHMVSDEYEQLSSEALEAARICANKYMVKSC GKDGFHIRVRLHPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVARVHIGQVIMSIRTKVQNKEHVIEALRRAKFKFP GRQKIHISKKWGFTKFNADEFEEMVSEKRLIPDGCGVKYIPNRGPLDKWRALHAA |
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