Gene
| Gene Model ID | habu1_s1426_g05148 |
|---|---|
| Locus | habu1_scaffold1426 : 1555936 ... 1591464 : - |
| To GenomeBrowser | habu1_scaffold1426:1555936..1591464 |
| Genes list of scaffold | habu1_scaffold1426 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| srsf protein kinase 3 isoform x1 | EC:2.7.11.0 GO:0004674 GO:0005524 GO:0006468 GO:0007519 GO:0009069 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s1426_g05148.t1 | 2 | 1 | Pkinase | 96 | 238 | 4.90006e-41 | 140.6 | 8.9e-27 | 4.4e-23 | 81.7 |
| habu1_s1426_g05148.t1 | 1 | 1 | Pkinase_Tyr | 98 | 240 | 3.6e-14 | 52.4 | 1.8e-13 | 8.8e-10 | 38.0 |
| habu1_s1426_g05148.t1 | 2 | 2 | Pkinase | 436 | 598 | 4.90006e-41 | 140.6 | 4.3e-19 | 2.1e-15 | 56.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s1426_g05148.t1 | gi|602627160|ref|XP_007420529.1| | PREDICTED: SRSF protein kinase 3 [Python bivittatus] | 0.0 |
| habu1_s1426_g05148.t1 | gi|637264614|ref|XP_008102073.1| | PREDICTED: SRSF protein kinase 3 isoform X1 [Anolis carolinensis] | 0.0 |
| habu1_s1426_g05148.t1 | gi|637264618|ref|XP_008102074.1| | PREDICTED: SRSF protein kinase 3 isoform X2 [Anolis carolinensis] | 0.0 |
| habu1_s1426_g05148.t1 | gi|533203370|ref|XP_005414206.1| | PREDICTED: SRSF protein kinase 3 isoform X1 [Chinchilla lanigera] | 0.0 |
| habu1_s1426_g05148.t1 | gi|635146297|ref|XP_007991271.1| | PREDICTED: SRSF protein kinase 3 isoform X5 [Chlorocebus sabaeus] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 2.8 |
| Venom grand-1 | 5.9 |
| Pit, infrared sensing | 4.1 |
| Nose | 4.6 |
| Brain-1 | 3.1 |
| Eye | 7.2 |
| fetal fibroblast | 4.4 |
| venom gland-2 | 3.1 |
| Brain-2 | 2.9 |
| Spleen | 9.8 |
| Lung | 1.9 |
| Liver | 1.8 |
| Kidney | 1.2 |
| Pancreas | 2.4 |
| Small intestine | 2.0 |
| Large intestine | 3.0 |
| Stomach | 3.3 |
| heart | 16.9 |
| ovary | 4.0 |
| cheek muscle | 38.6 |
Transcript
| Transcript ID | habu1_s1426_g05148.t1 |
|---|---|
| Definition | - |
>habu1_s1426_g05148.t1 ggtaatcctctgcttgtatggagctcaccggggcagggggggcgatgagcagcaaaaaaggcccggggagcagccgtggc aaaaagaagaaacataagaaagaaaaggcgccgccccctccgccggcagagagcgggatccccgcggggccacttagtcc ttcctgcgcagatgaccctgcccgcccgccctccgtgccccccctgcctcttcctgctgcggttggaagcgggctcttgg gatcggatgacgaggagcaagaggacccccgagattactgccgaggtgggtattatccagtaaagattggggatctcttc aatggacgctatcatgtggtacggaaacttggatggggtcacttttcgactgtctggctgtgttgggacattcagcggaa gcgctttgtggccctcaaagtggtgaaaagtgctgtacattatacagaaacagctgtggatgaaatcaagctactgaaat gtgtgcgagattctgatcctaatgatccgaaacgggagaatattgtccaactgattgacgatttcaagatctcagggatc aatggtgtccatgtttgtatggtccttgaggttttagggcaccagctgttgaagtggattatcaaatccaactaccaagg gcttcccataccttgtgtcaagagcatcttatgccaggtgctgcagggccttgattacctccacacaaagtgcaaaataa tccatacagacatcaaaccggagaatatcctgctgtgtgtagacgagtgttacatacgacggctggcagctgaagccact ctctggcagcagactgggggtcctcctccctctggttctgcagtcagctctgcaccccaggaaagcctgaatgggaagct ttcaaagaacaagcggaagaagttgaagaggaagcagaaacggcagagtcagctcctggctgaacgacttcgggaccttc agcagctggaggatctggcagctacaaatgcagggaccagcaagtccacagagaccacagaagggcattgcagttgcccc atctcagtctctggagggggagagccctcggggggatctctggcctgcagcccccaaagcctgacgtcatcttctggctt ctacacacacaatgcctacgacagctgcaatgggcattccccacctggaaccgccagccatcatgtcagccctgactctg ccacctccggcttctcaggatcactcttctctagttcagcgctctcgggcgtttctaatcagcgggagcgcggagggctt ctctcacccagcacttttggcacttctgaattcttggtgaaccctttggaaccccaaaacgcagacaaaatcagagtgaa gattgcagatctgggcaacgcttgttgggtgcacaaacattttacagaagacattcagactcgtcagtatagggctttgg aggtcctgattggtgctgtctacagcactccagctgatatctggagcacagcgtgtatggcttttgagctggcaactgga gactatctctttgagcctcactctggagaagattatacaagggatgaagatcatattgcccacattgttgagttacttgg cgatattcccccccactttgctctttcggggcggtactcgcgtgagtacttcaaccggcgaggagaactacgtcacataa agaacctgaagcactggggactatacgaggtcttggtggagaaatatgagtggcctctcgaacaagcagtccagttcacg gacttcctattgcccatgatggagtacatccctgaagaccgtgctacagctgcccagtgcctcgagcacccatggctaaa ctcttagggacaaaccttgctcaaacaaactgatgaatgaaataagggagttctggccccagatgggagtttcctggctc gtggtgtagcccgcattgctggagtggtgatgtggggaagattgtttactcctcttagttccaagattggagactctggc tgattaagctagagtttgtatggctggactggaatcccacatgtcaatctatggctacttctgaagcacaaatgaaagat gaccaggatttcttgccctttttttttttgtttgtttttgtggttagcatatgccttcttggttgacagtggccatcttc tctaggtgccattgggataatgctgtttgactgtttttaaccagttctgagatttcttgcaggggtttttttttccatca attttaaggtatatgtttaaaggttcccacccttaaaaaccaaacgaatgtgaccgaaaagtagtttgagaggaataggt acgtgcaaggtggatggtgagttggttggacctgagagttgggagcaagaagctggaaagtgttgccaactttttgttct cggaagaaaatatatcccttcccctgcctaaacttctatttttaactccaggaaaatgtggccttttttttttttttgag caaaagcttaacacaggtgaatgaaattttgtagagttatgtaatattgatgttgaaatttaacagtggaagcatttaga ggtatgagaaaactcatgggagaagaaatagaaatacaataatagcaaagtgggagaggaaggattcttattccagtgag tttctgaatacctagataaaagttttctggtaagattctaaagttgtgatcagcagctgaataaacagaaggatgcaata gtatcgctcctccttccatgagcatttatggcccctttccatattattagactatagcccctaatatgcatgcttttcac taatcaggggttgcgtatctgctcatcatttgatactttgagaatctcaattcaaaaaatagttgtggttgggggaaaaa atttgaaaggtatgtaatgaatttttttagcagcctgattttttctaatatgccttgtgatgtccaatgttgtttttact tctataccgtttcacttcctttagcccattttttttaatccaacttttgagatggtgagggatagagaataatccccgta tcatttgcagaattgggggggtggttgggagggaaatcaagctaactgtatgtgtgcggttagtgtgtttccttggcaga tgtttggggttgttcacattgctgccatcttgggctgctgttgcaactcctgattttcaacacatgctacttgtgattag cattttttttttcaaagaaagaatggctgctcataaaagcttgacccggatgagcaaaattattcaagctactttgtgcc tttataatggagcctacctattgtttgctggatacactgaattgggaaggaaagaaaagtgagagctgttacatataagc cttttttttttttgccttccactcccaaatgtcctaggaaaggaatgcagaagaaataaagacctagagccaggcgtaaa gccaatgtcccttccttttcctagagataccctgttaagagttcctgtttctgtgaaaactagattcagctgtctgaatc tggagtctgtggtttgaaactggaactggaactagaatacgcggttccgattctcctgaacactcgtctcaacctggggc attgagtggggaacatctgggtgaaaatactgttcataccaaagttgtgttgtcccagaatcaaacccaatgagagcgag acaagtctgttttcttgcactgttatctccccaatgagaagccatggccttcctttagaggaggcccatgtgtgccagtg ttgtggggggggagtatgtgtggaagtgttttgaatgctgtgctgttacagggattgaattcaaaaaaacaattttcatt aaaatatttgcaataacttttgatt |
|
Protein
| Protein ID | habu1_s1426_g05148.t1 |
|---|---|
| Definition | - |
>habu1_s1426_g05148.t1 MSSKKGPGSSRGKKKKHKKEKAPPPPPAESGIPAGPLSPSCADDPARPPSVPPLPLPAAVGSGLLGSDDEEQEDPRDYCR GGYYPVKIGDLFNGRYHVVRKLGWGHFSTVWLCWDIQRKRFVALKVVKSAVHYTETAVDEIKLLKCVRDSDPNDPKRENI VQLIDDFKISGINGVHVCMVLEVLGHQLLKWIIKSNYQGLPIPCVKSILCQVLQGLDYLHTKCKIIHTDIKPENILLCVD ECYIRRLAAEATLWQQTGGPPPSGSAVSSAPQESLNGKLSKNKRKKLKRKQKRQSQLLAERLRDLQQLEDLAATNAGTSK STETTEGHCSCPISVSGGGEPSGGSLACSPQSLTSSSGFYTHNAYDSCNGHSPPGTASHHVSPDSATSGFSGSLFSSSAL SGVSNQRERGGLLSPSTFGTSEFLVNPLEPQNADKIRVKIADLGNACWVHKHFTEDIQTRQYRALEVLIGAVYSTPADIW STACMAFELATGDYLFEPHSGEDYTRDEDHIAHIVELLGDIPPHFALSGRYSREYFNRRGELRHIKNLKHWGLYEVLVEK YEWPLEQAVQFTDFLLPMMEYIPEDRATAAQCLEHPWLNS |
|