Gene
| Gene Model ID | habu1_s1426_g05150 |
|---|---|
| Locus | habu1_scaffold1426 : 1671578 ... 1690704 : - |
| To GenomeBrowser | habu1_scaffold1426:1671578..1690704 |
| Genes list of scaffold | habu1_scaffold1426 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| atp-binding cassette sub-family d member 1 | EC:3.6.3.47 GO:0005325 GO:0005524 GO:0005739 GO:0005779 GO:0006635 GO:0015910 GO:0015916 GO:0019899 GO:0042626 GO:0042758 GO:0042760 GO:0042803 GO:0048471 GO:0055085 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s1426_g05150.t1 | 1 | 1 | ABC_membrane_2 | 77 | 362 | 0.0 | 331.4 | 0.0 | 0.0 | 331.1 |
| habu1_s1426_g05150.t1 | 1 | 1 | ABC_tran | 502 | 643 | 1.9e-16 | 60.5 | 3.7e-19 | 5.0e-16 | 59.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s1426_g05150.t1 | gi|602627172|ref|XP_007420535.1| | PREDICTED: ATP-binding cassette sub-family D member 1 isoform X1 [Python bivittatus] | 0.0 |
| habu1_s1426_g05150.t1 | gi|637264638|ref|XP_008102080.1| | PREDICTED: ATP-binding cassette sub-family D member 1 [Anolis carolinensis] | 0.0 |
| habu1_s1426_g05150.t1 | gi|602627174|ref|XP_007420536.1| | PREDICTED: ATP-binding cassette sub-family D member 1 isoform X2 [Python bivittatus] | 0.0 |
| habu1_s1426_g05150.t1 | gi|544523638|ref|XP_005594970.1| | PREDICTED: ATP-binding cassette sub-family D member 1 [Macaca fascicularis] | 0.0 |
| habu1_s1426_g05150.t1 | gi|109132728|ref|XP_001085640.1| | PREDICTED: ATP-binding cassette sub-family D member 1 isoform 2 [Macaca mulatta] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 1.9 |
| Venom grand-1 | 3.7 |
| Pit, infrared sensing | 1.9 |
| Nose | 3.1 |
| Brain-1 | 1.0 |
| Eye | 3.7 |
| fetal fibroblast | 2.1 |
| venom gland-2 | 6.3 |
| Brain-2 | 0.6 |
| Spleen | 1.2 |
| Lung | 1.7 |
| Liver | 4.5 |
| Kidney | 1.1 |
| Pancreas | 0.7 |
| Small intestine | 3.0 |
| Large intestine | 1.6 |
| Stomach | 1.6 |
| heart | 4.3 |
| ovary | 18.4 |
| cheek muscle | 2.5 |
Transcript
| Transcript ID | habu1_s1426_g05150.t1 |
|---|---|
| Definition | - |
>habu1_s1426_g05150.t1 gcgagtcagccccggctatagttagtcagacaacgctggcttcttgctggaagaagaagagcagaagccgaagcggaggt agtgcctccaccccagtgtgattatgcccttcaccacggccaaagtggccacacggctgagccaaggaatcaccgccaaa agagcagccgtggcactgctggtggccgcatatggggccaggaaattataccccatcctacgaagacagtgggctgcctc ggtcctccaggtgaattcagagaccaccagtcccagagagccaacagcaaggtggaaggaactcgaggagggcaccacat caccgcctggtgtgaacaaggtgttttttctccgtctcctccgtctcctgaggttgttgttccctgggccactgtgccgg cagacaggactcttggccttgcattcggctgccctggctagccgcaccttcctctcagtttatgtggcccagttggatgg acggttggcccgctgcattgtccgtaagaacctacaggactttacgtggcagcttcttcagtggctcctcattgccctgc cagccacctttgtcaacagtgccattcggtacctggaagggcaactgagcctggccttccgtggacgcttagtggaccat gcctatcagctctactttgagggtcagacctattaccgggtcagcaacatggatggacggttgcgtaacccggaccagtc actcacagaagatttggtggcctttgctaattctgtggcccatctctactcaaacttgaccaagcctgtccttgatctca ttgtgacttcctataccctcatcagttcagctagatcaaagggggctaatacagtttggccctcagttattgctggtttg gtagcttgcaccactgccaaggtgctacgtgcctgttcaccaaaatttggccaactggtggctgaggaagcacgccggaa aggagagctgcgctacatgcattctcgtgtggtggccaattcggaagagattgccttctatggggggcataaggtggagc tgtcccttctaaggcattgttatcatcagctggcctctcaaatcaacgtgctgcttctggagagactctggtatgtgatg ctggaacagttccttatgaagtatgtgtggagtgctactgggctggtcatggtggctgtaccaatcatcactgctactgg ttactccgagacagattcagaggcagtgaaacaagctgcagtggaaatggaagaggaagaatggataagcttgaggacgg aggcttttaccacagctcggaatcttttgtctgcagcagccgatgctacagagagggtcatctcttcctacaaagaggca actgaactagcaggctacactgctcgtgtgtatgagatgttccgggtgtttgaggatgtgaaatgctgcaacttccgacg tcctggagagcttgatgaaggccaggctcaggctagaacagttatgaagcatggtatgcgtgtcgagggctcactccaga tccaaggacatgtgattgatgttgaccatgggattatctgtgaaaacatccctatcatcactcctactggggatgtggta gtcagcagccttaatatccgagtagatgaaggcatgcacctactgatcactggaccaaatggctgtgggaagagttccct tttccggatcttgggggggctttggccaacttacaatggcaccctctacaaaccacctcctcatcgaatgttttacattc cacagagaccatacatgtctgtgggcaccctgagagaccaggtgatttacccagatacggccaaggatatgggaccgaaa ggacatactgattctgacctggaacggatcctgaacatcgtcaacctcaattatattgtacagcgtgaaggaggttggga agctgtcagtgactggaaggatgtactttcgggtggcgagaagcagcgaatggggatggcgcggatgttctatcacaggc caaagtacgctctccttgatgaatgtaccagtgctgtcagtatcgatgtagaaggcaagatcttccaagcagcaaaggat gcaggaattgcgttgctctccatcacacaccgaccttcgttgtggaagtaccatacgcatctcctccagttcgatgggga aggcggctggcggtttgagaagctggaccctgaagcccgtctctccctgcgggaggaaaagcagagcctggaacagaagc tggctggggtccctgaaatgcagcatcgtctcagcgaactctgtcaaatattgggtgaagatgcaccctctacagtgggc taggtgggtgatttgggtgccttccaatctccctttcttgctggcttggtaagaaggatcctaattg |
|
Protein
| Protein ID | habu1_s1426_g05150.t1 |
|---|---|
| Definition | - |
>habu1_s1426_g05150.t1 MPFTTAKVATRLSQGITAKRAAVALLVAAYGARKLYPILRRQWAASVLQVNSETTSPREPTARWKELEEGTTSPPGVNKV FFLRLLRLLRLLFPGPLCRQTGLLALHSAALASRTFLSVYVAQLDGRLARCIVRKNLQDFTWQLLQWLLIALPATFVNSA IRYLEGQLSLAFRGRLVDHAYQLYFEGQTYYRVSNMDGRLRNPDQSLTEDLVAFANSVAHLYSNLTKPVLDLIVTSYTLI SSARSKGANTVWPSVIAGLVACTTAKVLRACSPKFGQLVAEEARRKGELRYMHSRVVANSEEIAFYGGHKVELSLLRHCY HQLASQINVLLLERLWYVMLEQFLMKYVWSATGLVMVAVPIITATGYSETDSEAVKQAAVEMEEEEWISLRTEAFTTARN LLSAAADATERVISSYKEATELAGYTARVYEMFRVFEDVKCCNFRRPGELDEGQAQARTVMKHGMRVEGSLQIQGHVIDV DHGIICENIPIITPTGDVVVSSLNIRVDEGMHLLITGPNGCGKSSLFRILGGLWPTYNGTLYKPPPHRMFYIPQRPYMSV GTLRDQVIYPDTAKDMGPKGHTDSDLERILNIVNLNYIVQREGGWEAVSDWKDVLSGGEKQRMGMARMFYHRPKYALLDE CTSAVSIDVEGKIFQAAKDAGIALLSITHRPSLWKYHTHLLQFDGEGGWRFEKLDPEARLSLREEKQSLEQKLAGVPEMQ HRLSELCQILGEDAPSTVG |
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