Gene
| Gene Model ID | habu1_s1426_g05153 |
|---|---|
| Locus | habu1_scaffold1426 : 1792156 ... 1833913 : + |
| To GenomeBrowser | habu1_scaffold1426:1792156..1833913 |
| Genes list of scaffold | habu1_scaffold1426 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| calcium calmodulin-dependent protein kinase type 1b | EC:2.7.11.0 GO:0004674 GO:0005524 GO:0006468 GO:0009069 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s1426_g05153.t1 | 1 | 1 | Pkinase | 86 | 341 | 0.0 | 258.0 | 0.0 | 0.0 | 257.7 |
| habu1_s1426_g05153.t1 | 1 | 1 | Pkinase_Tyr | 88 | 335 | 5.4e-35 | 120.7 | 2.8e-38 | 6.9e-35 | 120.3 |
| habu1_s1426_g05153.t1 | 1 | 1 | Kinase-like | 169 | 329 | 3.6e-07 | 29.4 | 1.9e-10 | 4.7e-07 | 29.0 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s1426_g05153.t1 | gi|602627180|ref|XP_007420539.1| | PREDICTED: calcium/calmodulin-dependent protein kinase type 1B isoform X1 [Python bivittatus] | 0.0 |
| habu1_s1426_g05153.t1 | gi|637264650|ref|XP_008102082.1| | PREDICTED: calcium/calmodulin-dependent protein kinase type 1B [Anolis carolinensis] | 0.0 |
| habu1_s1426_g05153.t1 | gi|345326287|ref|XP_001510983.2| | PREDICTED: calcium/calmodulin-dependent protein kinase type 1B [Ornithorhynchus anatinus] | 0.0 |
| habu1_s1426_g05153.t1 | gi|156717838|ref|NP_001096459.1| | calcium/calmodulin-dependent protein kinase type 1B [Xenopus (Silurana) tropicalis] | 0.0 |
| habu1_s1426_g05153.t1 | gi|147906512|ref|NP_001082643.1| | pregnancy up-regulated nonubiquitous CaM kinase [Xenopus laevis] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 3.2 |
| Venom grand-1 | 1.8 |
| Pit, infrared sensing | 4.4 |
| Nose | 4.0 |
| Brain-1 | 77.6 |
| Eye | 12.1 |
| fetal fibroblast | 15.8 |
| venom gland-2 | 3.8 |
| Brain-2 | 76.5 |
| Spleen | 3.0 |
| Lung | 15.2 |
| Liver | 0.8 |
| Kidney | 1.4 |
| Pancreas | 2.4 |
| Small intestine | 6.3 |
| Large intestine | 16.2 |
| Stomach | 14.2 |
| heart | 24.3 |
| ovary | 3.2 |
| cheek muscle | 2.2 |
Transcript
| Transcript ID | habu1_s1426_g05153.t1 |
|---|---|
| Definition | - |
>habu1_s1426_g05153.t1 tcgcgcagctctggtcgcttctgggnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncccg cacctgttccctcccagtgtgctactctataataatgctcctgcctttctggatttgacttcggagtttgctgagaaaag gcacgcttccactcacgcggtttgcagtcagagcgccgtttcggctgcagttcctcccgcctcggtgacccgctttatgc gcgcacttaaacggaagtgtcagcggcgctgcgcgtttttctgttacgtgttcagctgggaaggagcgagctgggaagat ctcctctccccgccccccaaattaacaagagccccccacaaatatggctatcatattcctgggtttggaagtccagaagt tgtaagctctttctggccggcctgctttgagctgttcataatgcctcttgggaaaggctggaagaaaacagtcgaagaca ttgccagtgtctacgacatcaaggagaagctgggcgcgggggctttttcagaagtgctcttggcccaggaacatggatct cagcgccttgtagccctcaaatgtattcctaaaaaagcactgcgaggtaaagaagcagctgtggagaatgaaattgctgt actcaaaaagattcaacatgagaacattgttgctctggaagatatttatgaaagtcccactcatttgtacctggccatgc agctggtgacaggcggagagctcttcgatcgcatcattgaacgaggctattacacagaaaaggatgccagccaactcatc cggcaggtgctagaggctgtgaattacctgcatgatctgggaattgttcatcgggatctcaaacctgaaaatctcctgta tgctacaccatttgaggatgccaagattatgattacggactttgggctatctaaaattgaggctgatggtatcatgtcta cagcttgtggaaccccgggctatgttgccccggagatcctggagcagaagccctacggaaaagcagtggattcctgggca cttggtgtcatctcctatatcttactttgtggttatcctcctttctatgatgagaacgactctgagcttttcaaccagat cctgaaagctgaatatgagtttgactccccatactgggatgatatctccgattcagccaaagatttcatccgacatcttc tagaacgggaccctgagaaacgatttacttgtgaacaagctctgcaacatccctggatctctggggatacagctctggag aaggacattcatggatctgtgtgtgagcagattcagaagaactttgctcgcagtcagtggaagcgagcaatcaatgccac atcctttttgcgccatatcaccaagatgggaccaggtgcagagggtgaagaaattggagaggcaacgtctggaggacagc gtggaaaatggtgaccccccccagaggtgcttcaagagcctgggccactgccttgcatgagctaccctcctgcatgcggc ttcacagccacaacgctgcgtcggcaccctcccccaactgtggggtatcctttcattttgtgctcccccccccctctggg gatatctctgccccgaggggctcaggagttcagtcaagccaagagcatcactgtccagcctgctttgagccggctcaaat gctccctgcctggggccagaggtcatccccttgaagctggtggagcctttgcaatcttgctgtgttactcacctcacttc catccatgtcagccattgaggccagcaacctactggagaatcagcagagagtgcggtggcggggaagtaaactctcagcc attctttgccagc |
|
Protein
| Protein ID | habu1_s1426_g05153.t1 |
|---|---|
| Definition | - |
>habu1_s1426_g05153.t1 MRALKRKCQRRCAFFCYVFSWEGASWEDLLSPPPKLTRAPHKYGYHIPGFGSPEVVSSFWPACFELFIMPLGKGWKKTVE DIASVYDIKEKLGAGAFSEVLLAQEHGSQRLVALKCIPKKALRGKEAAVENEIAVLKKIQHENIVALEDIYESPTHLYLA MQLVTGGELFDRIIERGYYTEKDASQLIRQVLEAVNYLHDLGIVHRDLKPENLLYATPFEDAKIMITDFGLSKIEADGIM STACGTPGYVAPEILEQKPYGKAVDSWALGVISYILLCGYPPFYDENDSELFNQILKAEYEFDSPYWDDISDSAKDFIRH LLERDPEKRFTCEQALQHPWISGDTALEKDIHGSVCEQIQKNFARSQWKRAINATSFLRHITKMGPGAEGEEIGEATSGG QRGKW |
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