Gene
| Gene Model ID | habu1_s1426_g05155 |
|---|---|
| Locus | habu1_scaffold1426 : 1897076 ... 1902097 : + |
| To GenomeBrowser | habu1_scaffold1426:1897076..1902097 |
| Genes list of scaffold | habu1_scaffold1426 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| cyclin-related protein fam58a isoform x7 | GO:0000079 GO:0006355 GO:0016591 GO:0019901 GO:0030295 GO:0043410 GO:0045860 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s1426_g05155.t1 | 1 | 1 | Cyclin_N | 2 | 72 | 5.5e-10 | 38.9 | 4.2e-14 | 6.2e-10 | 38.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s1426_g05155.t1 | gi|602627196|ref|XP_007420547.1| | PREDICTED: cyclin-related protein FAM58A isoform X5 [Python bivittatus] | 0.0 |
| habu1_s1426_g05155.t1 | gi|602627188|ref|XP_007420543.1| | PREDICTED: cyclin-related protein FAM58A isoform X1 [Python bivittatus] | 0.0 |
| habu1_s1426_g05155.t1 | gi|602627194|ref|XP_007420546.1| | PREDICTED: cyclin-related protein FAM58A isoform X4 [Python bivittatus] | 0.0 |
| habu1_s1426_g05155.t1 | gi|637264661|ref|XP_008102084.1| | PREDICTED: cyclin-related protein FAM58A [Anolis carolinensis] | 0.0 |
| habu1_s1426_g05155.t1 | gi|297469786|ref|XP_002707232.1| | PREDICTED: cyclin-related protein FAM58A isoform X7 [Bos taurus] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 2.5 |
| Venom grand-1 | 2.8 |
| Pit, infrared sensing | 3.1 |
| Nose | 1.4 |
| Brain-1 | 2.2 |
| Eye | 2.1 |
| fetal fibroblast | 5.4 |
| venom gland-2 | 2.7 |
| Brain-2 | 2.1 |
| Spleen | 2.9 |
| Lung | 1.4 |
| Liver | 6.6 |
| Kidney | 2.5 |
| Pancreas | 7.2 |
| Small intestine | 1.6 |
| Large intestine | 1.3 |
| Stomach | 1.9 |
| heart | 1.1 |
| ovary | 6.8 |
| cheek muscle | 1.4 |
Transcript
| Transcript ID | habu1_s1426_g05155.t1 |
|---|---|
| Definition | - |
>habu1_s1426_g05155.t1 acgcgaccaccgggagggactccctggcctggttctctcaagcgagttaaagggtagcgaacaaaaggtggtccgggaga ggctaacgaccgggcacgaggcgcctagttgcccggacacagactgagcaggaaggggctcggcgcctgctcgtgctctc ttccctgctcgtgcctggggcttttccgggtctcaaatcgtccgtccagcctggtgggccgagcgtaggtgagatcaaat gcaaccatctcctgcaggcggagatcctcttgagattaaccaacattcatgaatcccattggactgccggaaaccagcca gctatctgcaaatgtcagaattcacttcaaagtctgcaggttcatcatggaagcaggtgtgaagttaggcctgcgctctg tccctattgctactgcgtgcaccatttatcaccgattttttacggaggtgcctctggagtcgtatgatccttacttggta gctatggctgcactgtatctggctgggaaagtagaagaacagcatttgcggataagagacatcatcaatgtgagccacag gtacttgcatcctcggagtgaccccctggagctggacacacatttctgggagctgagagacagcattgtccagttacctt ctccattttttactgtccctgaagcactggatgaaccggcatagttgggagcggaccccggtggcagcagcagcttgggc tctgttgcgggacagttaccatggacccctgtgcctccagcactctccacagcatattgctgtgacagtcctttaccttg ctctgcagtgttatggagtggaagtacctgctgatgctgaagcagagcgaccgtggtggcaggtaagggtgggaagtgaa cagcagttcaaatgccttctgcgtccttcagctctaactgggtcaggttttggagcttgcctgtgtgggactttgtttat atgattgattgtttgcttatttatttagcattcttgcttcacagcctctgcactttaaactgaaatgtgggtagtgtagt ttcttagatattaagtcactgctatcgcctgacctgcaccagaagtggaaaacctcccactgatcttccagctgtttctt taatcagtcttatgtacaactttccatattgagagaaaattttgaagcagtatacagtaatatatcaaaatcaaagcaaa tattaaactacataaaatccttatcttac |
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Protein
| Protein ID | habu1_s1426_g05155.t1 |
|---|---|
| Definition | - |
>habu1_s1426_g05155.t1 MEAGVKLGLRSVPIATACTIYHRFFTEVPLESYDPYLVAMAALYLAGKVEEQHLRIRDIINVSHRYLHPRSDPLELDTHF WELRDSIVQLPSPFFTVPEALDEPA |
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