Protobothrops flavoviridis ver. 1.0

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDhabu1_s1426_g05156
Locus habu1_scaffold1426 : 1904535 ... 1996265 : -
To GenomeBrowser habu1_scaffold1426:1904535..1996265
Genes list of scaffold habu1_scaffold1426

Annotation by Blast2GO
Annotation GO
plasma membrane calcium-transporting atpase 3 EC:3.6.3.8 GO:0005388 GO:0005524 GO:0005794 GO:0005886 GO:0008152 GO:0016021 GO:0016529 GO:0031982 GO:0046872 GO:0070588

Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
habu1_s1426_g05156.t2 1 1 Cation_ATPase_N 54 120 1.3e-17 62.9 2.4e-20 4.5e-17 61.2
habu1_s1426_g05156.t2 1 1 E1-E2_ATPase 159 448 0.0 192.3 0.0 0.0 191.3
habu1_s1426_g05156.t2 1 1 Hydrolase 453 791 5.4e-26 92.3 1.2e-28 2.3e-25 90.2
habu1_s1426_g05156.t2 1 1 HAD 455 788 1.4e-14 54.7 1.4e-17 2.6e-14 53.8
habu1_s1426_g05156.t2 1 1 Hydrolase_like2 506 597 2.3e-15 56.3 2.8e-18 5.2e-15 55.1
habu1_s1426_g05156.t2 1 1 Hydrolase_3 755 823 4.4e-07 29.7 6.6e-08 0.00012 21.7
habu1_s1426_g05156.t2 1 1 Cation_ATPase_C 878 1056 1.4013e-45 155.6 0.0 1.4013e-45 155.6
habu1_s1426_g05156.t2 2 1 ATP_Ca_trans_C 1101 1145 2.9e-28 98.0 7.3e-15 1.4e-11 44.6
habu1_s1426_g05156.t2 2 2 ATP_Ca_trans_C 1151 1201 2.9e-28 98.0 1.2e-16 2.3e-13 50.3

Expression profile
Libraries FPKM
>Adult
Venom fang forming tissue 0.0
Venom grand-1 0.0
Pit, infrared sensing 0.0
Nose 0.8
Brain-1 26.3
Eye 3.1
fetal fibroblast 0.0
venom gland-2 0.0
Brain-2 25.0
Spleen 0.2
Lung 0.0
Liver 0.0
Kidney 0.0
Pancreas 0.0
Small intestine 0.0
Large intestine 0.1
Stomach 0.1
heart 0.0
ovary 0.2
cheek muscle 0.0

Transcript
Transcript IDhabu1_s1426_g05156.t1
Definition-
>habu1_s1426_g05156.t1
ggtatacattcctgacttgtttctatgtgtcactgcagacattggttgacttgagagcttcatgctttgctgacctgaat
gagtgccaggagcttaactacattgttgcttttctaacaggtttcctttgggcagcaggaacaccttttgtgccaagctc
taagaaggccttcttctctgcttcttccatggcttggccccctggctggctggcctctagaaaaccttgtggccccaccc
ctgaggctctatagaatgaatccaggagacagccgggactgagcaggttttccattctgtctgccagactaacctagctc
aagtctactcttcatccccccacacctctgcccggtgtacccagctggactgtggctcacgtccaacatgggagacatgg
ccaacagctctgtggatttctatcccaaaaaccagcggcaagaaatgaaccatgcaggtggctttggctgcaccctgtcg
gagctgcgctccctcatggagctgcgtggggctgaagctctccagaaagtccaggagacctacactgatgtccacgggct
ctgcaggagactcaagacttcccccaccgaaggtctctctgataacacagctgatctggaaaagagaagacagatctatg
gacagaactttatccccccaaagaagcccaagaccttcctgcagttagtgtgggaggcacttcaggatgtgaccctaatc
attctggaaattgctgccatcatctctttgggactatctttttatgctccaccaggtgaagaaagtgaagtctgtgggaa
cgtgtcaggggctgcagaggatgagggtgagtcagaagctggctggattgaaggtgctgccatcctactgtcagtgatct
gtgtagtgctggtcacagcattcaacgactggagcaaggagaagcagtttcgaggtctgcagagccgcatagaacaggaa
cagaaattcactgtcatccgcaatgggcaactggtccaaattcccgtggctgagctggtggtgggagacatcgcccagat
caaatatggtgacctgcttcctgccgacggagtgcttattcaggggaatgatctcaagatagatgagagctccttgacgg
gagagtcagatcatgtacgcaaatcaggggacaaagatcccatgttgctatcaggcacccacgtcatggaaggctctggg
cggatggttatcagtgctgttggagtcaactcacagactgggatcatctttactttgctgggtgctggtggggaagagga
ggaaaagaaagagaaaaaagccaaaaaacaggatggggcagttgccatggagatgcagcccctgaaaagtgccgagggtg
gtgagatggaagagcgggagaagaagaagaccagtgtgcccaaaaaagagaaatctgtcttgcaggggaagctcaccaaa
ctggctgttcaaattgggaaagcagggctggtgatgtcagctatcacagtcattatcctcgtcctgtatttcatcattca
aacctttgttattgatggaaagacgtggatggctgagtgcactcctgtttacgtgcaatactttgtcaagttctttatta
tcggggtcaccgtcctggtggtggccgtgcccgaaggcttgccactggctgtcactatctctttagcctactctgtcaag
aaaatgatgaaagacaacaacctggtccggcatttggatgcctgtgagacaatgggcaatgccacagccatctgctcgga
caagacagggacccttaccactaatcgcatgacagttgtgcagtcctacatgggtgacactcactacaaggagacacctg
atcccagtagcctgacatccaagacactggatatgctggtgcatgccattgccatcaacagtgcctataccaccaagata
ctacctccagaaaaagaagggggtctgccacgccaggtaggcaataagaccgaatgtgcactgctgggctttgtgcttca
tctgcgacgtgactaccagcctgtccgtgagcacattccggaggagaagctctacaaggtttacaccttcaattctgtcc
gaaaatctatgagcaccgtcatttgcatgccggatggtggctatcgcctcttcagcaaaggcgcttctgaaattgtcctc
agaaagtgcacaaacgttctaagtagcaatggagagcttcgtgccttccggcccagggaccgagatgaaatggtaaaaaa
agtgatcgagcccatggcgtgtgatgggctgcgaactatctgcatagcctaccgtgactttccagcagggaaggagcctg
actgggataatgagaatgatattgtgatagacttgacctgcattgctgtggtggggattgaggatcctgtgcgaccagag
gtgccagaggccatccgcaagtgccagcgtgctggcattactgtccgtatggtgacaggagacaacatcaacacagctcg
ggccattgctgccaaatgtggcatcatccaaccaggggaggacttcttgtgcctggagggaaaggacttcaaccgaagga
tccgcaacgagaagggagagatagaacaagaacgccttgataaaatctggccaaagctgcgtgttctggctcgatcatca
cctaccgataagcacaccctggtgaaaggcatcattgacagcactattggggaccagcgccaggtagtcgctgtcactgg
ggatggaacgaacgatggacccgcgctcaagaaggccgatgtgggctttgccatgggcatagcaggcactgatgtagcga
aagaggcctctgacatcatcctgactgatgacaatttctccagcatcgtcaaggcggtgatgtggggtcgcaatgtttat
gacagcatctccaaattcctgcagttccagctcactgtcaatgtggtggccgtcatcgtagccttcactggggcctgcat
cacccaggattctcctctcaaggcagtacagatgctgtgggtgaacctcattatggacacatttgcttccttggcccttg
ccaccgagcccccaactgaggccctgttgctgcgcaagccatatggacgcaacaaacccctcatatcccggaccatgatg
aaaaatattttgggccatgctgtgtaccagctcattatcatcttcactctcctctttgtaggagaggttatatttgacat
cgacaatggccgcaatgctcccctgcattctccgtcctcagagcattacaccatcatctttaacacctttgtcatgatgc
agctcttcaatgagatcaatgcccgcaaaatccatggagagcgcaatgtctttgatggcatttttggcaaccccatcttc
tgcagcattgttttgggcacctttggcatacagatcgtcattgtgcagtttgggggaaagccattcagctgttctccact
gaatgcagagcaatggctgtggtgtctttttgtgggcttcggggaactcgtctggggacaggtcattgccaccatcccta
ccagccaccttaaatgcctgaaggaagcaggacatggtcctggtaaggatgagatcacagatgaggaaatggctgaggat
gaggaggaaattgaccacgccgagcgggagctgcgccgtggccagatcttgtggttccgtggcctcaaccgcatccagac
ccagatggaggtagttagcaccttcaagagaagcggctcctttcagggggctgtccgacgccgctcttccgtcctcagtc
aactgcacgatgtaaccaatatttctacccccactcacatccgcgtagtgaaagcgttccgtagttcactctatgaaggg
ctggagaagccagataccaagacctccatccataatttcatgacaacgcctgagttcttgatcaacgactacatccacaa
cattcctctcattgacgatacagacgtggaggagagcgagggtcccctaagacagcacttcagggccagccccccaccat
ctcccaacaagaacaacaatgccattgacagtggcatctaccttagcaccgatgatccagaagagccttttctgctgcgg
ctcctgccctttggaactcatacaaccagagtgtacttagatctctgcatccaaagtgtagacccgtatcagttccaaga
ctatctggtccatgacaggtttggaaagatcttcactgaacacctaaaacataaattaaaatgaggaaaaagttttagca
aagcaggaaaaaaatccaggtaggatcaagtgggcaaaatattttttccagaaaataaagtactctataaccaattggga
t
Transcript IDhabu1_s1426_g05156.t2
Definition-
>habu1_s1426_g05156.t2
ggtatacattcctgacttgtttctatgtgtcactgcagacattggttgacttgagagcttcatgctttgctgacctgaat
gagtgccaggagcttaactacattgttgcttttctaacaggtttcctttgggcagcaggaacaccttttgtgccaagctc
taagaaggccttcttctctgcttcttccatggcttggccccctggctggctggcctctagaaaaccttgtggccccaccc
ctgaggctctatagaatgaatccaggagacagccgggactgagcaggttttccattctgtctgccagactaacctagctc
aagtctactcttcatccccccacacctctgcccggtgtacccagctggactgtggctcacgtccaacatgggagacatgg
ccaacagctctgtggatttctatcccaaaaaccagcggcaagaaatgaaccatgcaggtggctttggctgcaccctgtcg
gagctgcgctccctcatggagctgcgtggggctgaagctctccagaaagtccaggagacctacactgatgtccacgggct
ctgcaggagactcaagacttcccccaccgaaggtctctctgataacacagctgatctggaaaagagaagacagatctatg
gacagaactttatccccccaaagaagcccaagaccttcctgcagttagtgtgggaggcacttcaggatgtgaccctaatc
attctggaaattgctgccatcatctctttgggactatctttttatgctccaccaggtgaagaaagtgaagtctgtgggaa
cgtgtcaggggctgcagaggatgagggtgagtcagaagctggctggattgaaggtgctgccatcctactgtcagtgatct
gtgtagtgctggtcacagcattcaacgactggagcaaggagaagcagtttcgaggtctgcagagccgcatagaacaggaa
cagaaattcactgtcatccgcaatgggcaactggtccaaattcccgtggctgagctggtggtgggagacatcgcccagat
caaatatggtgacctgcttcctgccgacggagtgcttattcaggggaatgatctcaagatagatgagagctccttgacgg
gagagtcagatcatgtacgcaaatcaggggacaaagatcccatgttgctatcaggcacccacgtcatggaaggctctggg
cggatggttatcagtgctgttggagtcaactcacagactgggatcatctttactttgctgggtgctggtggggaagagga
ggaaaagaaagagaaaaaagccaaaaaacaggatggggcagttgccatggagatgcagcccctgaaaagtgccgagggtg
gtgagatggaagagcgggagaagaagaagaccagtgtgcccaaaaaagagaaatctgtcttgcaggggaagctcaccaaa
ctggctgttcaaattgggaaagcagggctggtgatgtcagctatcacagtcattatcctcgtcctgtatttcatcattca
aacctttgttattgatggaaagacgtggatggctgagtgcactcctgtttacgtgcaatactttgtcaagttctttatta
tcggggtcaccgtcctggtggtggccgtgcccgaaggcttgccactggctgtcactatctctttagcctactctgtcaag
aaaatgatgaaagacaacaacctggtccggcatttggatgcctgtgagacaatgggcaatgccacagccatctgctcgga
caagacagggacccttaccactaatcgcatgacagttgtgcagtcctacatgggtgacactcactacaaggagacacctg
atcccagtagcctgacatccaagacactggatatgctggtgcatgccattgccatcaacagtgcctataccaccaagata
ctacctccagaaaaagaagggggtctgccacgccaggtaggcaataagaccgaatgtgcactgctgggctttgtgcttca
tctgcgacgtgactaccagcctgtccgtgagcacattccggaggagaagctctacaaggtttacaccttcaattctgtcc
gaaaatctatgagcaccgtcatttgcatgccggatggtggctatcgcctcttcagcaaaggcgcttctgaaattgtcctc
agaaagtgcacaaacgttctaagtagcaatggagagcttcgtgccttccggcccagggaccgagatgaaatggtaaaaaa
agtgatcgagcccatggcgtgtgatgggctgcgaactatctgcatagcctaccgtgactttccagcagggaaggagcctg
actgggataatgagaatgatattgtgatagacttgacctgcattgctgtggtggggattgaggatcctgtgcgaccagag
gtgccagaggccatccgcaagtgccagcgtgctggcattactgtccgtatggtgacaggagacaacatcaacacagctcg
ggccattgctgccaaatgtggcatcatccaaccaggggaggacttcttgtgcctggagggaaaggacttcaaccgaagga
tccgcaacgagaagggagagatagaacaagaacgccttgataaaatctggccaaagctgcgtgttctggctcgatcatca
cctaccgataagcacaccctggtgaaaggcatcattgacagcactattggggaccagcgccaggtagtcgctgtcactgg
ggatggaacgaacgatggacccgcgctcaagaaggccgatgtgggctttgccatgggcatagcaggcactgatgtagcga
aagaggcctctgacatcatcctgactgatgacaatttctccagcatcgtcaaggcggtgatgtggggtcgcaatgtttat
gacagcatctccaaattcctgcagttccagctcactgtcaatgtggtggccgtcatcgtagccttcactggggcctgcat
cacccagaataataatggagcacaagaacgagtctttggagctgtccatcaaaaggattctcctctcaaggcagtacaga
tgctgtgggtgaacctcattatggacacatttgcttccttggcccttgccaccgagcccccaactgaggccctgttgctg
cgcaagccatatggacgcaacaaacccctcatatcccggaccatgatgaaaaatattttgggccatgctgtgtaccagct
cattatcatcttcactctcctctttgtaggagaggttatatttgacatcgacaatggccgcaatgctcccctgcattctc
cgtcctcagagcattacaccatcatctttaacacctttgtcatgatgcagctcttcaatgagatcaatgcccgcaaaatc
catggagagcgcaatgtctttgatggcatttttggcaaccccatcttctgcagcattgttttgggcacctttggcataca
gatcgtcattgtgcagtttgggggaaagccattcagctgttctccactgaatgcagagcaatggctgtggtgtctttttg
tgggcttcggggaactcgtctggggacaggtcattgccaccatccctaccagccaccttaaatgcctgaaggaagcagga
catggtcctggtaaggatgagatcacagatgaggaaatggctgaggatgaggaggaaattgaccacgccgagcgggagct
gcgccgtggccagatcttgtggttccgtggcctcaaccgcatccagacccagatggaggtagttagcaccttcaagagaa
gcggctcctttcagggggctgtccgacgccgctcttccgtcctcagtcaactgcacgatgtaaccaatatttctaccccc
actcacatccgcgtagtgaaagcgttccgtagttcactctatgaagggctggagaagccagataccaagacctccatcca
taatttcatgacaacgcctgagttcttgatcaacgactacatccacaacattcctctcattgacgatacagacgtggagg
agagcgagggtcccctaagacagcacttcagggccagccccccaccatctcccaacaagaacaacaatgccattgacagt
ggcatctaccttagcaccgatgatccagaagagccttttctgctgcggctcctgccctttggaactcatacaaccagagt
gtacttagatctctgcatccaaagtgtagacccgtatcagttccaagactatctggtccatgacaggtttggaaagatct
tcactgaacacctaaaacataaattaaaatgaggaaaaagttttagcaaagcaggaaaaaaatccaggtaggatcaagtg
ggcaaaatattttttccagaaaataaagtactctataaccaattgggat

Protein
Protein IDhabu1_s1426_g05156.t1
Definition-
>habu1_s1426_g05156.t1
MGDMANSSVDFYPKNQRQEMNHAGGFGCTLSELRSLMELRGAEALQKVQETYTDVHGLCRRLKTSPTEGLSDNTADLEKR
RQIYGQNFIPPKKPKTFLQLVWEALQDVTLIILEIAAIISLGLSFYAPPGEESEVCGNVSGAAEDEGESEAGWIEGAAIL
LSVICVVLVTAFNDWSKEKQFRGLQSRIEQEQKFTVIRNGQLVQIPVAELVVGDIAQIKYGDLLPADGVLIQGNDLKIDE
SSLTGESDHVRKSGDKDPMLLSGTHVMEGSGRMVISAVGVNSQTGIIFTLLGAGGEEEEKKEKKAKKQDGAVAMEMQPLK
SAEGGEMEEREKKKTSVPKKEKSVLQGKLTKLAVQIGKAGLVMSAITVIILVLYFIIQTFVIDGKTWMAECTPVYVQYFV
KFFIIGVTVLVVAVPEGLPLAVTISLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLTTNRMTVVQSYMGDTHY
KETPDPSSLTSKTLDMLVHAIAINSAYTTKILPPEKEGGLPRQVGNKTECALLGFVLHLRRDYQPVREHIPEEKLYKVYT
FNSVRKSMSTVICMPDGGYRLFSKGASEIVLRKCTNVLSSNGELRAFRPRDRDEMVKKVIEPMACDGLRTICIAYRDFPA
GKEPDWDNENDIVIDLTCIAVVGIEDPVRPEVPEAIRKCQRAGITVRMVTGDNINTARAIAAKCGIIQPGEDFLCLEGKD
FNRRIRNEKGEIEQERLDKIWPKLRVLARSSPTDKHTLVKGIIDSTIGDQRQVVAVTGDGTNDGPALKKADVGFAMGIAG
TDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAFTGACITQDSPLKAVQMLWVNLIMDTFA
SLALATEPPTEALLLRKPYGRNKPLISRTMMKNILGHAVYQLIIIFTLLFVGEVIFDIDNGRNAPLHSPSSEHYTIIFNT
FVMMQLFNEINARKIHGERNVFDGIFGNPIFCSIVLGTFGIQIVIVQFGGKPFSCSPLNAEQWLWCLFVGFGELVWGQVI
ATIPTSHLKCLKEAGHGPGKDEITDEEMAEDEEEIDHAERELRRGQILWFRGLNRIQTQMEVVSTFKRSGSFQGAVRRRS
SVLSQLHDVTNISTPTHIRVVKAFRSSLYEGLEKPDTKTSIHNFMTTPEFLINDYIHNIPLIDDTDVEESEGPLRQHFRA
SPPPSPNKNNNAIDSGIYLSTDDPEEPFLLRLLPFGTHTTRVYLDLCIQSVDPYQFQDYLVHDRFGKIFTEHLKHKLK
Protein IDhabu1_s1426_g05156.t2
Definition-
>habu1_s1426_g05156.t2
MGDMANSSVDFYPKNQRQEMNHAGGFGCTLSELRSLMELRGAEALQKVQETYTDVHGLCRRLKTSPTEGLSDNTADLEKR
RQIYGQNFIPPKKPKTFLQLVWEALQDVTLIILEIAAIISLGLSFYAPPGEESEVCGNVSGAAEDEGESEAGWIEGAAIL
LSVICVVLVTAFNDWSKEKQFRGLQSRIEQEQKFTVIRNGQLVQIPVAELVVGDIAQIKYGDLLPADGVLIQGNDLKIDE
SSLTGESDHVRKSGDKDPMLLSGTHVMEGSGRMVISAVGVNSQTGIIFTLLGAGGEEEEKKEKKAKKQDGAVAMEMQPLK
SAEGGEMEEREKKKTSVPKKEKSVLQGKLTKLAVQIGKAGLVMSAITVIILVLYFIIQTFVIDGKTWMAECTPVYVQYFV
KFFIIGVTVLVVAVPEGLPLAVTISLAYSVKKMMKDNNLVRHLDACETMGNATAICSDKTGTLTTNRMTVVQSYMGDTHY
KETPDPSSLTSKTLDMLVHAIAINSAYTTKILPPEKEGGLPRQVGNKTECALLGFVLHLRRDYQPVREHIPEEKLYKVYT
FNSVRKSMSTVICMPDGGYRLFSKGASEIVLRKCTNVLSSNGELRAFRPRDRDEMVKKVIEPMACDGLRTICIAYRDFPA
GKEPDWDNENDIVIDLTCIAVVGIEDPVRPEVPEAIRKCQRAGITVRMVTGDNINTARAIAAKCGIIQPGEDFLCLEGKD
FNRRIRNEKGEIEQERLDKIWPKLRVLARSSPTDKHTLVKGIIDSTIGDQRQVVAVTGDGTNDGPALKKADVGFAMGIAG
TDVAKEASDIILTDDNFSSIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAFTGACITQNNNGAQERVFGAVHQKDSPL
KAVQMLWVNLIMDTFASLALATEPPTEALLLRKPYGRNKPLISRTMMKNILGHAVYQLIIIFTLLFVGEVIFDIDNGRNA
PLHSPSSEHYTIIFNTFVMMQLFNEINARKIHGERNVFDGIFGNPIFCSIVLGTFGIQIVIVQFGGKPFSCSPLNAEQWL
WCLFVGFGELVWGQVIATIPTSHLKCLKEAGHGPGKDEITDEEMAEDEEEIDHAERELRRGQILWFRGLNRIQTQMEVVS
TFKRSGSFQGAVRRRSSVLSQLHDVTNISTPTHIRVVKAFRSSLYEGLEKPDTKTSIHNFMTTPEFLINDYIHNIPLIDD
TDVEESEGPLRQHFRASPPPSPNKNNNAIDSGIYLSTDDPEEPFLLRLLPFGTHTTRVYLDLCIQSVDPYQFQDYLVHDR
FGKIFTEHLKHKLK

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Okinawa Institute of Science and Technology
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