Gene
| Gene Model ID | habu1_s1426_g05162 |
|---|---|
| Locus | habu1_scaffold1426 : 2244200 ... 2268451 : + |
| To GenomeBrowser | habu1_scaffold1426:2244200..2268451 |
| Genes list of scaffold | habu1_scaffold1426 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| filamin-a-like isoform x3 | GO:0006810 GO:0017016 GO:0030036 GO:0034613 GO:0043227 GO:0043229 GO:0045184 GO:0048519 GO:0050794 GO:0050896 GO:0060255 GO:0065008 GO:1902578 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s1426_g05162.t1 | 1 | 1 | CH | 19 | 61 | 4.1e-06 | 26.8 | 4.7e-09 | 7.0e-06 | 26.0 |
| habu1_s1426_g05162.t1 | 8 | 1 | Filamin | 56 | 138 | 0.0 | 477.6 | 6.5e-13 | 9.6e-10 | 38.9 |
| habu1_s1426_g05162.t1 | 8 | 2 | Filamin | 146 | 238 | 0.0 | 477.6 | 2.3e-21 | 3.4e-18 | 66.0 |
| habu1_s1426_g05162.t1 | 8 | 3 | Filamin | 245 | 335 | 0.0 | 477.6 | 3.2e-21 | 4.7e-18 | 65.6 |
| habu1_s1426_g05162.t1 | 8 | 4 | Filamin | 344 | 438 | 0.0 | 477.6 | 2.5e-14 | 3.8e-11 | 43.4 |
| habu1_s1426_g05162.t1 | 8 | 5 | Filamin | 447 | 538 | 0.0 | 477.6 | 5.6e-20 | 8.3e-17 | 61.6 |
| habu1_s1426_g05162.t1 | 8 | 6 | Filamin | 584 | 665 | 0.0 | 477.6 | 5.6e-21 | 8.3e-18 | 64.8 |
| habu1_s1426_g05162.t1 | 8 | 7 | Filamin | 672 | 758 | 0.0 | 477.6 | 2.3e-22 | 3.4e-19 | 69.2 |
| habu1_s1426_g05162.t1 | 8 | 8 | Filamin | 767 | 860 | 0.0 | 477.6 | 3.2e-20 | 4.7e-17 | 62.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s1426_g05162.t1 | gi|602627218|ref|XP_007420558.1| | PREDICTED: filamin-A-like isoform X3 [Python bivittatus] | 0.0 |
| habu1_s1426_g05162.t1 | gi|602627214|ref|XP_007420556.1| | PREDICTED: filamin-A-like isoform X1 [Python bivittatus] | 0.0 |
| habu1_s1426_g05162.t1 | gi|602627220|ref|XP_007420559.1| | PREDICTED: filamin-A-like isoform X4 [Python bivittatus] | 0.0 |
| habu1_s1426_g05162.t1 | gi|602627216|ref|XP_007420557.1| | PREDICTED: filamin-A-like isoform X2 [Python bivittatus] | 0.0 |
| habu1_s1426_g05162.t1 | gi|637264737|ref|XP_008102100.1| | PREDICTED: filamin-A isoform X8 [Anolis carolinensis] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 15.5 |
| Venom grand-1 | 3.3 |
| Pit, infrared sensing | 12.5 |
| Nose | 3.8 |
| Brain-1 | 4.0 |
| Eye | 7.7 |
| fetal fibroblast | 198.2 |
| venom gland-2 | 4.2 |
| Brain-2 | 2.6 |
| Spleen | 6.8 |
| Lung | 71.9 |
| Liver | 2.7 |
| Kidney | 5.3 |
| Pancreas | 2.4 |
| Small intestine | 14.1 |
| Large intestine | 95.5 |
| Stomach | 104.7 |
| heart | 9.5 |
| ovary | 45.8 |
| cheek muscle | 19.9 |
Transcript
| Transcript ID | habu1_s1426_g05162.t1 |
|---|---|
| Definition | - |
>habu1_s1426_g05162.t1 ggtcgcggcattaaaaaggttgagaaccactggcctaacagatcagcagggcaccatattggagaagggtgttctaaaca tttctggaaataacaaaaaagatcattgtcacttgaaacacagacagtaaagctattgtggatgggaacctgaagctgat tctgggcttgatttggacattgatcctgcattattccatctccatgcccatgtgggatgaggaagatgatgaagaagcca agaaacaaactcccaaacagcgattgctaggctggatccaaaacaaactgccccagttgcccatcacaaacttcagcaag gattggcagagtgggcgggctcttggagccctggttgacagctgtgccccaggtattgagcccacgggaaacatggtgaa gaagaaggccgagttcacagtagaaaccatcagtgctggtcagggagaagtgctggtttatgtagaggatccagctggcc atcgtgaagaagctaaggtcatcgctaacaatgacaagaatcggacattctcagtgtggtatgtgcctaaagtgacaggt gtccacaaggtgacggtattgtttgctgggcagcacattgccaagagtccttttgaggtgaatgtggacaaatcccatgg tgatgccagcaaggtcactgctcaaggccctggcctcgaacccactggcaacatagccaacaagactacctactttgaaa tctttactgctggtgctggggtcggagaacttgaggtaatcattcaagatcccactggcaagaaaggaacagttgagcag caactggaagacaaaggcaatagcacatatcgctgctcctacaagcccactttggagggcacctacaccatctacattac ctttggtgggattcccatccctcgcagcccatacacagtcactgtggggcaagcatgccaccccaatgcttgccgagcgg taggtcgaggcctgcaacccaagggggtccgagtaaaagagactgcagacttcaaggtgtacaccaagggcgctggcagt ggtgaactcaaggtcacaatcaaaggcccaaaaggattagaagaacgtgtcaagcagaaggacctgggtgatggagtata tagttttgaatactacccaactgtacctggcaattatactatcacaataacttggggagggcagcacatcccccgcagcc cgtttgaggtgagaattgggacagaatgcataaaccagaaggtgcgagcctgggggccaggtttggaaggaggtgtcgtg ggcaagtcggcagatttcgtagtagaggccattggggatgatgttggcacattaggtgatgtgagcattggcatcaagtg tgcccctggtgtggtgggccctgctgaggctgacatcaattttgacattattcggaatgataatgacaccttcacggtca agtataccccccagggtgctggaagctacacaatcttggtgctgtttgccgaccaggccacccccagcagccccatcaga gtcaaagtggaaccctcgcatgatgccagcaaagtcaaagctgagggacctggcctcaacaggactggtgtggagatggg gaagccaacccacttcacggttaacaccaagccagcaggcaaggccaagctggatgtgcagttcactggcccagccaagg gagacgccgtaagagactctgaaataatcgatcaccacgataacacctatactgtcagatatacccctgtgcagcagggt aaccttggagtaaatgtaacatacgggggagaccaaattcccaaaagtcctttcaatgtgggagtagctcccaccctgga cctcggcaagatcaagatctctggacttggagacaccacaaagccggaaaggttgagaagaagccctgatgtacagcatg attgtatatccaaacaatttgccttcttctgggtgaaggcctatggaccaggcttgaagggcggcttggctggcattcct gccccttttaccattgataccaagggggctgggaacggaggcctcggcctgaccgtggaaggcccctgcgaggccaaaat agaatgcctggacaatggagatggcacttgttcagtctcctacttgcccacagaaccaggggagtacaacatcaatatcc tctttgcggacacccatgtgccaggctctcctttcaaagcccaagtggtgcctggctttgacccatccaaagtgaagtgc tctggaccagggctggagcatgccacagtggggcaggcaggagagttcagtgtggactgctctactgctgggagcgctga gctcaccattgagatcatctctgaaagtggcacgcaggcagaagtccacgtgcgggacaatggcgatggcacttacacca tcacttacatcccactctgccctggtatctacaccatcaccattaaatacggggggcagcctataccaaacttccccagt aagctcaacgtggagccagcggtggatacatctggcgttaaagtctatggtcctggagtggaaggcaaaggtgtattccg tgaagccacaacggagttcagtgtggatgctcgacccttgactaagaccgggggccctcacatcaaaacaagagtatcca atccttcgggaaaccttacagagagctatgtgcgtgacaatggcgatggtacctacaatgtggagtatacaccctatgaa gatggtgtccactcggttgatgtgacctatgatggcagccctgtaccaagtagccctttccgggtaccggtaactgaagg atgtaaccctgcaagggtgagagtgcatgggcccggcatccaaagtgggactactaacaagcgcaataagttcacagtgg agaccaggtaaaaattagaaagagcgaatgtagcagtatttgaaaaggagggatgaacaaggttagctcttagtatcggc tagctacttttacccatctttcaaaaaggcatataataaagttgatcaagaatatgtttttt |
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Protein
| Protein ID | habu1_s1426_g05162.t1 |
|---|---|
| Definition | - |
>habu1_s1426_g05162.t1 MPMWDEEDDEEAKKQTPKQRLLGWIQNKLPQLPITNFSKDWQSGRALGALVDSCAPGIEPTGNMVKKKAEFTVETISAGQ GEVLVYVEDPAGHREEAKVIANNDKNRTFSVWYVPKVTGVHKVTVLFAGQHIAKSPFEVNVDKSHGDASKVTAQGPGLEP TGNIANKTTYFEIFTAGAGVGELEVIIQDPTGKKGTVEQQLEDKGNSTYRCSYKPTLEGTYTIYITFGGIPIPRSPYTVT VGQACHPNACRAVGRGLQPKGVRVKETADFKVYTKGAGSGELKVTIKGPKGLEERVKQKDLGDGVYSFEYYPTVPGNYTI TITWGGQHIPRSPFEVRIGTECINQKVRAWGPGLEGGVVGKSADFVVEAIGDDVGTLGDVSIGIKCAPGVVGPAEADINF DIIRNDNDTFTVKYTPQGAGSYTILVLFADQATPSSPIRVKVEPSHDASKVKAEGPGLNRTGVEMGKPTHFTVNTKPAGK AKLDVQFTGPAKGDAVRDSEIIDHHDNTYTVRYTPVQQGNLGVNVTYGGDQIPKSPFNVGVAPTLDLGKIKISGLGDTTK PERLRRSPDVQHDCISKQFAFFWVKAYGPGLKGGLAGIPAPFTIDTKGAGNGGLGLTVEGPCEAKIECLDNGDGTCSVSY LPTEPGEYNINILFADTHVPGSPFKAQVVPGFDPSKVKCSGPGLEHATVGQAGEFSVDCSTAGSAELTIEIISESGTQAE VHVRDNGDGTYTITYIPLCPGIYTITIKYGGQPIPNFPSKLNVEPAVDTSGVKVYGPGVEGKGVFREATTEFSVDARPLT KTGGPHIKTRVSNPSGNLTESYVRDNGDGTYNVEYTPYEDGVHSVDVTYDGSPVPSSPFRVPVTEGCNPARVRVHGPGIQ SGTTNKRNKFTVETR |
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