Gene
| Gene Model ID | habu1_s1426_g05163 |
|---|---|
| Locus | habu1_scaffold1426 : 2268720 ... 2300028 : + |
| To GenomeBrowser | habu1_scaffold1426:2268720..2300028 |
| Genes list of scaffold | habu1_scaffold1426 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| filamin-a-like isoform x2 | GO:0001837 GO:0001948 GO:0004871 GO:0005080 GO:0005634 GO:0005667 GO:0005802 GO:0005886 GO:0005925 GO:0007195 GO:0008134 GO:0015629 GO:0017160 GO:0031523 GO:0031532 GO:0034394 GO:0034988 GO:0042177 GO:0042384 GO:0042803 GO:0042993 GO:0043113 GO:0043123 GO:0043433 GO:0044822 GO:0045022 GO:0048365 GO:0050821 GO:0051015 GO:0051220 GO:0051764 GO:0070062 GO:0070527 GO:0090307 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s1426_g05163.t1 | 12 | 1 | Filamin | 14 | 104 | 0.0 | 654.0 | 1.1e-19 | 2.1e-16 | 60.3 |
| habu1_s1426_g05163.t1 | 12 | 2 | Filamin | 112 | 201 | 0.0 | 654.0 | 1.2e-22 | 2.2e-19 | 69.8 |
| habu1_s1426_g05163.t1 | 12 | 3 | Filamin | 208 | 297 | 0.0 | 654.0 | 6.8e-24 | 1.3e-20 | 73.8 |
| habu1_s1426_g05163.t1 | 12 | 4 | Filamin | 367 | 416 | 0.0 | 654.0 | 1.2e-13 | 2.2e-10 | 41.0 |
| habu1_s1426_g05163.t1 | 12 | 5 | Filamin | 423 | 509 | 0.0 | 654.0 | 2.1e-22 | 4.0e-19 | 69.0 |
| habu1_s1426_g05163.t1 | 12 | 6 | Filamin | 548 | 595 | 0.0 | 654.0 | 5.2e-07 | 0.00097 | 19.6 |
| habu1_s1426_g05163.t1 | 12 | 7 | Filamin | 606 | 690 | 0.0 | 654.0 | 1.0e-22 | 1.9e-19 | 70.0 |
| habu1_s1426_g05163.t1 | 12 | 8 | Filamin | 735 | 787 | 0.0 | 654.0 | 4.1e-13 | 7.6e-10 | 39.2 |
| habu1_s1426_g05163.t1 | 12 | 9 | Filamin | 798 | 881 | 0.0 | 654.0 | 1.5e-20 | 2.9e-17 | 63.1 |
| habu1_s1426_g05163.t1 | 12 | 10 | Filamin | 892 | 977 | 0.0 | 654.0 | 2.5e-15 | 4.6e-12 | 46.3 |
| habu1_s1426_g05163.t1 | 12 | 11 | Filamin | 987 | 1073 | 0.0 | 654.0 | 6.4e-17 | 1.2e-13 | 51.4 |
| habu1_s1426_g05163.t1 | 12 | 12 | Filamin | 1110 | 1198 | 0.0 | 654.0 | 3.0e-17 | 5.5e-14 | 52.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s1426_g05163.t1 | gi|637264721|ref|XP_008102096.1| | PREDICTED: filamin-A isoform X4 [Anolis carolinensis] | 0.0 |
| habu1_s1426_g05163.t1 | gi|637264725|ref|XP_008102097.1| | PREDICTED: filamin-A isoform X5 [Anolis carolinensis] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 47.5 |
| Venom grand-1 | 22.9 |
| Pit, infrared sensing | 46.6 |
| Nose | 19.5 |
| Brain-1 | 9.6 |
| Eye | 24.1 |
| fetal fibroblast | 505.1 |
| venom gland-2 | 25.1 |
| Brain-2 | 6.7 |
| Spleen | 26.8 |
| Lung | 250.0 |
| Liver | 14.0 |
| Kidney | 16.9 |
| Pancreas | 7.4 |
| Small intestine | 41.7 |
| Large intestine | 271.4 |
| Stomach | 418.1 |
| heart | 31.4 |
| ovary | 86.3 |
| cheek muscle | 75.8 |
Transcript
| Transcript ID | habu1_s1426_g05163.t1 |
|---|---|
| Definition | - |
>habu1_s1426_g05163.t1 ttcgtaaaccacctgctttgatgcttccccctgacattattgcacagcactttagactaaaatgcaagctcgtggtggga tttggaaggctcgaaagcacatactattgctgagaagacaaataataaaaccataagagataagcccaagtaggctttaa acagaggtgcagagctatatatatgaaatccaataagcaatggatggaagcccattcaaagtgcctgtgcatgatgtggt ggattcatccaaggtaaaatgttcaggccctggcctgactcctggtgttgtcagagccaatgttccccagtcctttactg tggactccagcaaggcaggtgtggcacccctcgaggttaaagttcaaggtccaaagggagttgttgaacctgtagatgta gtggataatgctgatggtactcagactgcaagttacgtaccaagtcgtgaaggaccgtatagcattgctgtgcgctatgg agacgatgaggtgcctcacagcccattcaaggttaaggttctacctactcatgatgctagcaaggtaaaggccagtggtc ccggactcaacactacaggtgttccagctagtttgccagtagagtttacaattgacgctaaggatgctggagaaggtttg ctggctgtacagatcacggaccctgaaggcaaacccaaaaaggccaccatccgggacaaccaagatggcacctacacagt atcttacgttcccgacatgactggccgctacaccattctcatcaagtatggtggagatgaaattccctactccccctacc gtatccgtgctttaccaactggtgatgccagcaagtgtacggtgacaggagctggcatcggtcccaccatccagattggt gaagagactgtcatcactgtggacgccaaggctgctggaaaaggcaaggtgacctgcacggtgtgcacaccagatggcac agaggtagatgttgatgtggtagaaaatgaggacgggacctttgacatcttctacacggcacctcagccaggcaaatacg tcatctgtgtacgctttggaggagagcacattcccaacagcccgttccaggttacggccctggatggtgagcgcacgacc ccccagcagatggcccagccgatgcgtgccccaccctacgcatacgcacctggtgcacagcagccctggggaccgaaagt aacagcaacagatcgtcctgtcaacgggctggatgctggactgcggcctttcgacttggttattcctttcactatcaaaa aaggagagataacaggagaggtacgcatgccctctggtaaggtggcaaagccagatattactgacaataaggatggcaca gtgacagtgcgttatgcccccaccgaggctggattgcatgagatggacatccgttacgacaatatgcatatcccaggtag tccccttcagttctatgtggattatgttaacagtggccatgtgacagcttatggtcccggactcacccatggtgtggtca acaagccagctgtcttcacagtcaacacaaaagatgctggagaagggggcctctctttggccattgaaggcccctctaag gcagagattggatgcactgataaccaagatggcacctgtacagtgtcctatctcccagttctgcccggagactacaacat cctggtgaaatacaatgacaagcatatcccaggaagtcctttcaccgccaagattactggtgatgatacaatgcgcatgt cccatctcaaagtgggctcatcggctgatattcccttgaacatcactgagacggacttgacccagctgacagccacagtg atcccaccttctggtcgcgaggagccttgtctgctcaaacgcctacgcaatggacatgttggaatttcatttgtccccaa agagattggagagcacattgtgaacatcaagaaaaatggactgcacatccccaacagccctatcacggtgatgatcagcc agtcagaaattggagatgccagccgtgtcagggtctctggcccaggactcagtgagggccggacctttgaaccttcagag ttcatcattgataccagggatgcaggctatggtggtctgagcttatccattgaaggtcccagtaaggttgatatcaatac agaagacctggaagatggcacttgcaaagtcacctattgcccaacagagcctggcaactacatcatcaacattaagtttg cagatcagcatgtgccagggagcccattttctgtgaaggtgacaggagagggaagaatgaaacaaatgatcacgcgctgc cgcaaagccccatccgtctccaatattggcagccagtgtgacctgagtctgaaaatcccagaaatcaacatcagggacat gactgcccaggtgaccagcccatcaggcaaatcccatgatgcagagatcttggaggcagaaaacaacacctactgcatcc gctttgtgcccactgagacgggcatccactcagtcagtgtcaagtataaaggacagcacgtgcctggaagccccttccag ttcacagtgggccctcttggtgaaggtggcgcacacaaagtccgggcaggtggcccaggcttggagagagctgaagctgg tgtgccagctgactttagcatctggacaagagaggcaggagctggtggtctctccattgctgtggagggccctagtaagg cagagattgcttttgaggaccggaaagatggttcatgtggagtttcatatattgtgcaagagcctggcgactatgaggtt tcagtgaagttcaatgacgagcacatcccagacagtccctttatagtacccgccacctccacctccgatgatgcctgccg actcactgtttctagtcttcaggagtcagggttaaaagtgaaccagccagcctcattcgctgtcagcttgaacggggcca agggtgtgattgatgccaaggtgcacagcccctcaggggctttggaggaatgccacgtcaccgaaattgatgaagataaa tacgcagtgcggttcattccccgtgaaaatggcatctactcggttgatgtcaagttcaatggaagccacatacccggcag tcccttcaagattcgtgttggggaaataggtcaagctggagacccagggatggtatccgcctatggccctggcttggaag gtggtgtgacaggacaccctgctgaattcatagtcaacactacaaacgctgggcctggggcactgtctgtcactattgat ggtccctcaaaggtgaagatggactgccaagagtgctcagagggctacaaagtcatctacacacccatggcacctggcag ctacctcatctccatcaaattcggtggtccatatcacattgctggcagtcctttcaaagctaaaattacaggggcccgcc ttgttcctagccacagcctccacgagacttcctcagtcttcatggatggagtagccaaacctgatggagcagcacccaaa tttgcttcagatgccagcaaagtggttgccaaggggctgggcctcaacaagggttttctaggccaaaagaactctttcac cgtcgattgcagcaaagcagggaacaacatgttgctggtgggtgtacacggccccaagactccatgtgaggagatcgtgg tgaagcacttgggcaaccggttgtacaacgtcacctacctgttgaaggacagaggcgactacatcctggtggtgaaatgg ggagatgagcacatccccggcagccccttccatatctctgtaccttagagctcttccctctgcctgagtgtaacactgcc cctcctgaactccctctgtaatgcttctgcctcttacttactaattggcaggggtggtggccaaggaggctgtcttatgg ggtgggagggatgaatgtgggtgggttgccctcggaaggaagagattcctgtggatctgtttacatgcagcagtaattat ttccaaccatttcnnnnnnnnnnnnnnnnnnnnnncgtgtctttttctttccttggcgggaggctcgattgatttttctc accagcatgccagcttcatgcccatgaactgaacttgtgtcctcccccagggttgccagaaaagccctctttcccccatc aacaaaatatggcaggtggatactgccagtgcatattgttgccatccactgcttgagaaaccgctgcttctcctggaggg cagtctcttttgtctctttgtccttttcccttaaagggcttgagatggaagctctgtgggtaaccaataaccagtggcag gcgctactccttgctttgccagtttatagccaaatccttgtttagtcctttcaagatttaaattgtggttgtgcacaact gccagtacctttctttgacaagggaagggaataaaagttctgcttcaaatgccggtt |
|
Protein
| Protein ID | habu1_s1426_g05163.t1 |
|---|---|
| Definition | - |
>habu1_s1426_g05163.t1 MDGSPFKVPVHDVVDSSKVKCSGPGLTPGVVRANVPQSFTVDSSKAGVAPLEVKVQGPKGVVEPVDVVDNADGTQTASYV PSREGPYSIAVRYGDDEVPHSPFKVKVLPTHDASKVKASGPGLNTTGVPASLPVEFTIDAKDAGEGLLAVQITDPEGKPK KATIRDNQDGTYTVSYVPDMTGRYTILIKYGGDEIPYSPYRIRALPTGDASKCTVTGAGIGPTIQIGEETVITVDAKAAG KGKVTCTVCTPDGTEVDVDVVENEDGTFDIFYTAPQPGKYVICVRFGGEHIPNSPFQVTALDGERTTPQQMAQPMRAPPY AYAPGAQQPWGPKVTATDRPVNGLDAGLRPFDLVIPFTIKKGEITGEVRMPSGKVAKPDITDNKDGTVTVRYAPTEAGLH EMDIRYDNMHIPGSPLQFYVDYVNSGHVTAYGPGLTHGVVNKPAVFTVNTKDAGEGGLSLAIEGPSKAEIGCTDNQDGTC TVSYLPVLPGDYNILVKYNDKHIPGSPFTAKITGDDTMRMSHLKVGSSADIPLNITETDLTQLTATVIPPSGREEPCLLK RLRNGHVGISFVPKEIGEHIVNIKKNGLHIPNSPITVMISQSEIGDASRVRVSGPGLSEGRTFEPSEFIIDTRDAGYGGL SLSIEGPSKVDINTEDLEDGTCKVTYCPTEPGNYIINIKFADQHVPGSPFSVKVTGEGRMKQMITRCRKAPSVSNIGSQC DLSLKIPEINIRDMTAQVTSPSGKSHDAEILEAENNTYCIRFVPTETGIHSVSVKYKGQHVPGSPFQFTVGPLGEGGAHK VRAGGPGLERAEAGVPADFSIWTREAGAGGLSIAVEGPSKAEIAFEDRKDGSCGVSYIVQEPGDYEVSVKFNDEHIPDSP FIVPATSTSDDACRLTVSSLQESGLKVNQPASFAVSLNGAKGVIDAKVHSPSGALEECHVTEIDEDKYAVRFIPRENGIY SVDVKFNGSHIPGSPFKIRVGEIGQAGDPGMVSAYGPGLEGGVTGHPAEFIVNTTNAGPGALSVTIDGPSKVKMDCQECS EGYKVIYTPMAPGSYLISIKFGGPYHIAGSPFKAKITGARLVPSHSLHETSSVFMDGVAKPDGAAPKFASDASKVVAKGL GLNKGFLGQKNSFTVDCSKAGNNMLLVGVHGPKTPCEEIVVKHLGNRLYNVTYLLKDRGDYILVVKWGDEHIPGSPFHIS VP |
|