Gene
| Gene Model ID | habu1_s1426_g05164 |
|---|---|
| Locus | habu1_scaffold1426 : 2306190 ... 2329736 : + |
| To GenomeBrowser | habu1_scaffold1426:2306190..2329736 |
| Genes list of scaffold | habu1_scaffold1426 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| translocon-associated protein subunit delta | GO:0005783 GO:0016021 GO:0070062 GO:0071391 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s1426_g05164.t2 | 1 | 1 | TRAP-delta | 100 | 255 | 0.0 | 261.4 | 0.0 | 0.0 | 261.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 104.3 |
| Venom grand-1 | 439.8 |
| Pit, infrared sensing | 142.1 |
| Nose | 161.1 |
| Brain-1 | 22.7 |
| Eye | 91.7 |
| fetal fibroblast | 122.7 |
| venom gland-2 | 655.3 |
| Brain-2 | 17.6 |
| Spleen | 152.1 |
| Lung | 108.9 |
| Liver | 230.3 |
| Kidney | 102.3 |
| Pancreas | 374.0 |
| Small intestine | 174.0 |
| Large intestine | 86.5 |
| Stomach | 130.8 |
| heart | 43.9 |
| ovary | 22.9 |
| cheek muscle | 74.1 |
Transcript
| Transcript ID | habu1_s1426_g05164.t1 |
|---|---|
| Definition | - |
>habu1_s1426_g05164.t1 aggttggtcgttgctcgctctttccctgcgtggtgatggcggggaccgggttagggctgccgtggttggtgtccgcgttg ttggtgctgagtggggcgcgaggtgaaacatgcacagaaccagttatctccccatcctattatactacctcagatgctgt tatttcttctgaaaccgtctttgttgttgagatctccctcacctgtaaaaatggagcacaaaatgtggccctctatgcag atgtcaatggcaagcaattccctgttacacggggtcaggatgttggtcgctatcaggtttcttggagcatggaacataag ctggctcgctcaggcacctatgaggtgaagttttttgatgaggagtcctatagtatcttgcgcaaggctcagcgcaacaa tgaggatgtctcggagatcaaacctctttttacagtcagtgtggatcatcggggtgcctggaatggaccatgggtctcca ctgaggtattggcagcattaattggtattctggtatattatatggcattcactgctaagagtaacatccaagcataaagc acttcaataaactctctataccaacttctctgctttctgccttttctttagaaggcaaagatggttgtctttgccacttc aaaaatacctgtgtggcttgttagcatcattaattcccatctcatgttttggtttgaagtcggtcagaattataacaatg ttagaacttcttatggtttgatcaaagagcatttgctgatcttcttgccacctttcaaagtaaattttttgagactcaac tgtgcctaaacaaagagctgaaaagacccaataaagcaattgctttccatggagttg |
|
| Transcript ID | habu1_s1426_g05164.t2 |
| Definition | - |
>habu1_s1426_g05164.t2 ccggcaatggcaaaactctcccaatacgttgtgcgatgtcatgtctgcactacaaggaaacatttgagggaggggagcag atccactctatctggggtgagcaaatactcccagagacagatggtttcacagataacctggcctattcggtgacaatttc agacaatctaagggctctgctccaaaaaacagattctgaagaactggctcacagtaagcaccacatgcacagatcccgat ataaaaaccgcggttgctggagtagcgtcgcccttgctgattggctggcggcctttcccgccgtccctcgcgccggaggc ggacggctcggcttgacgacggcagcaggtgaaacatgcacagaaccagttatctccccatcctattatactacctcaga tgctgttatttcttctgaaaccgtctttgttgttgagatctccctcacctgtaaaaatggagcacaaaatgtggccctct atgcagatgtcaatggcaagcaattccctgttacacggggtcaggatgttggtcgctatcaggtttcttggagcatggaa cataagctggctcgctcaggcacctatgaggtgaagttttttgatgaggagtcctatagtatcttgcgcaaggctcagcg caacaatgaggatgtctcggagatcaaacctctttttacagtcagtgtggatcatcggggtgcctggaatggaccatggg tctccactgaggtattggcagcattaattggtattctggtatattatatggcattcactgctaagagtaacatccaagca taaagcacttcaataaactctctataccaacttctctgctttctgccttttctttagaaggcaaagatggttgtctttgc cacttcaaaaatacctgtgtggcttgttagcatcattaattcccatctcatgttttggtttgaagtcggtcagaattata acaatgttagaacttcttatggtttgatcaaagagcatttgctgatcttcttgccacctttcaaagtaaattttttgaga ctcaactgtgcctaaacaaagagctgaaaagacccaataaagcaattgctttccatggagttg |
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Protein
| Protein ID | habu1_s1426_g05164.t1 |
|---|---|
| Definition | - |
>habu1_s1426_g05164.t1 MAGTGLGLPWLVSALLVLSGARGETCTEPVISPSYYTTSDAVISSETVFVVEISLTCKNGAQNVALYADVNGKQFPVTRG QDVGRYQVSWSMEHKLARSGTYEVKFFDEESYSILRKAQRNNEDVSEIKPLFTVSVDHRGAWNGPWVSTEVLAALIGILV YYMAFTAKSNIQA |
|
| Protein ID | habu1_s1426_g05164.t2 |
| Definition | - |
>habu1_s1426_g05164.t2 MSCLHYKETFEGGEQIHSIWGEQILPETDGFTDNLAYSVTISDNLRALLQKTDSEELAHSKHHMHRSRYKNRGCWSSVAL ADWLAAFPAVPRAGGGRLGLTTAAGETCTEPVISPSYYTTSDAVISSETVFVVEISLTCKNGAQNVALYADVNGKQFPVT RGQDVGRYQVSWSMEHKLARSGTYEVKFFDEESYSILRKAQRNNEDVSEIKPLFTVSVDHRGAWNGPWVSTEVLAALIGI LVYYMAFTAKSNIQA |
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