Gene
| Gene Model ID | habu1_s1426_g05168 |
|---|---|
| Locus | habu1_scaffold1426 : 2533720 ... 2541032 : + |
| To GenomeBrowser | habu1_scaffold1426:2533720..2541032 |
| Genes list of scaffold | habu1_scaffold1426 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| cav3 protein | GO:0000139 GO:0001778 GO:0002027 GO:0005246 GO:0005783 GO:0005901 GO:0006641 GO:0007015 GO:0007520 GO:0008022 GO:0010614 GO:0010831 GO:0014819 GO:0016010 GO:0017015 GO:0017080 GO:0030315 GO:0031122 GO:0032403 GO:0038009 GO:0042593 GO:0042632 GO:0042693 GO:0043014 GO:0043407 GO:0044325 GO:0045298 GO:0045792 GO:0046716 GO:0051001 GO:0051394 GO:0051647 GO:0051896 GO:0051926 GO:0055013 GO:0055117 GO:0060035 GO:0060299 GO:0060307 GO:0060347 GO:0060373 GO:0060762 GO:0070836 GO:0071253 GO:0090002 GO:0090279 GO:1900744 GO:1900825 GO:1901019 GO:2000649 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s1426_g05168.t1 | 1 | 1 | Caveolin | 18 | 154 | 0.0 | 198.9 | 0.0 | 0.0 | 198.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s1426_g05168.t1 | gi|327264289|ref|XP_003216946.1| | PREDICTED: caveolin-3-like [Anolis carolinensis] | 0.0 |
| habu1_s1426_g05168.t1 | gi|602627236|ref|XP_007420566.1| | PREDICTED: caveolin-3-like [Python bivittatus] | 0.0 |
| habu1_s1426_g05168.t1 | gi|156717622|ref|NP_001096351.1| | caveolin 3, gene 2 [Xenopus (Silurana) tropicalis] | 0.0 |
| habu1_s1426_g05168.t1 | gi|45387883|ref|NP_991301.1| | caveolin-3 [Danio rerio] | 0.0 |
| habu1_s1426_g05168.t1 | gi|729722115|ref|XP_010568626.1| | PREDICTED: caveolin-3 [Haliaeetus leucocephalus] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 0.3 |
| Venom grand-1 | 1.5 |
| Pit, infrared sensing | 1.5 |
| Nose | 0.0 |
| Brain-1 | 0.1 |
| Eye | 1.3 |
| fetal fibroblast | 0.0 |
| venom gland-2 | 0.3 |
| Brain-2 | 0.0 |
| Spleen | 0.1 |
| Lung | 0.2 |
| Liver | 0.0 |
| Kidney | 0.2 |
| Pancreas | 0.0 |
| Small intestine | 0.0 |
| Large intestine | 0.0 |
| Stomach | 0.0 |
| heart | 42.9 |
| ovary | 0.2 |
| cheek muscle | 85.3 |
Transcript
| Transcript ID | habu1_s1426_g05168.t1 |
|---|---|
| Definition | - |
>habu1_s1426_g05168.t1 tcgaggactaaaccggtcagagaaagacagacagaccctgaacaggaaacagacccagagctatggcccaacaagaagaa caagaaatagtagacgtgattctggagaagatcgactcccgggatcctctcaccaaagagattgatttggtggaaagaga ccccaagcagatcaatcaagaggtggtcaaggtagactttgaagatgtgatcgctgagccagagggcacccacagctttg atggagtgtggaaggccagcaacaccacctttactgtcagcaagtactggtgctaccggattctatcgggggcactgggg gtgccccttgccttgctctggggcttcctctttgcctgtgtttctttctgccacatctggggggccatgccttgcatcaa gagctacttcatagaggtgcagtgctgtgggcgctgctatgccttgtgcatacgtaccttctgcgaccctctctttgaag cagtggggaaagtttgcagcgacgtccgagtggccctgcgcaaggaacacgcaaaggactgagcctctcctttgggtcag gacaggattctggcttcatttttccttcacttgacccatcagatgggacagtagctcagctggaatcctgagtcagtcga ctgatggaggtggaaacaatctggctgatggatctttaccttgaattccct |
|
Protein
| Protein ID | habu1_s1426_g05168.t1 |
|---|---|
| Definition | - |
>habu1_s1426_g05168.t1 MAQQEEQEIVDVILEKIDSRDPLTKEIDLVERDPKQINQEVVKVDFEDVIAEPEGTHSFDGVWKASNTTFTVSKYWCYRI LSGALGVPLALLWGFLFACVSFCHIWGAMPCIKSYFIEVQCCGRCYALCIRTFCDPLFEAVGKVCSDVRVALRKEHAKD |
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