Gene
| Gene Model ID | habu1_s1426_g05169 |
|---|---|
| Locus | habu1_scaffold1426 : 2541970 ... 2586539 : - |
| To GenomeBrowser | habu1_scaffold1426:2541970..2586539 |
| Genes list of scaffold | habu1_scaffold1426 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| rho gtpase-activating protein 4 | GO:0005070 GO:0005654 GO:0005829 GO:0005925 GO:0007010 GO:0007266 GO:0007399 GO:0009967 GO:0030336 GO:0043065 GO:0048011 GO:0048365 GO:0051056 GO:0097190 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s1426_g05169.t2 | 1 | 1 | FCH | 24 | 119 | 6.5e-19 | 67.9 | 9.5e-21 | 4.7e-17 | 61.9 |
| habu1_s1426_g05169.t2 | 1 | 1 | RhoGAP | 555 | 703 | 0.0 | 156.5 | 0.0 | 1.4013e-45 | 154.9 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 2.3 |
| Venom grand-1 | 0.3 |
| Pit, infrared sensing | 2.1 |
| Nose | 1.9 |
| Brain-1 | 8.8 |
| Eye | 6.4 |
| fetal fibroblast | 2.1 |
| venom gland-2 | 0.5 |
| Brain-2 | 12.2 |
| Spleen | 13.6 |
| Lung | 1.6 |
| Liver | 1.7 |
| Kidney | 0.7 |
| Pancreas | 0.8 |
| Small intestine | 0.9 |
| Large intestine | 1.9 |
| Stomach | 0.6 |
| heart | 0.5 |
| ovary | 1.5 |
| cheek muscle | 0.1 |
Transcript
| Transcript ID | habu1_s1426_g05169.t1 |
|---|---|
| Definition | - |
>habu1_s1426_g05169.t1 tggcggccctgctgcgccctgccacaacccgtcgagatgaacgcgccggggaaagcgcgccgcgagcgaggcagcctggc cgaatacgagaaccaagtgaaagaaatgcgctggcagatgggggagcaagtccgaggtcttgactctcaggcagagagtc ggcaacagttgctccaagatgtggctgacttcctgcgccggaaggctgaagtggaacaagaatattcccgaggacttgag aaattgtctgaacgcttctcggctaagatacgtggctccaaggagcatcagaatttcaggaaggatcagaatctcccttc tcctttgaattgctggtatacaatactgaatcagacacggcaggcaagccgggatcatggagcactgagtgaaatctaca cagggcatttggtgcttcggttggtgcacatcagcgaggatgtggggcgattggcccggaaaagcaaagagatggaacag cagatgcaggatgagctcctgaaggcaatttcagagttgcagatggctatgaagtcataccagacataccgcattgattg tctgaatgccgaggcaaagctgcgtgaggctgaacggcaagaggagaagcgcagtggtggaaagcattctgatcctagtg gatccccgggtggggcaggacttgacaaaaacccccgtcgcacttcacttcggaaggtggagcgcctcctggaaaagaga cagtcgaaattcctggaaagcaagctgaaatgtgccaaggctcggaatgattacttgttgaatctacacactgctaactc tgccatgagcaactactatgtacgcgatgtggctgacctgctagattgttttgaccttggtttccacctttcgctgggca aagtactgaggacctacctagccgcagagtcacgggcccaagcatcttggcaacagggcctatgcgccattgaaggggca gttgatgctttggatccattgggagataagtccaggatgatggaggccaaccctgcagcttattgccctcctctgtcatt tgactaccagcctcatgaaggtgatgaggtatctgaagtccgggctgagggtccactgagaaatgaactagtttcccgtt tccagcacattcagtcccgcctcaatgccatcaccctggagacagatgaagtcaacaagactctgaaggctaccttgcaa agtctgatagatcttgtgacagcagaggagccagaggcacttgatgcctttcaaggctgtcagtctacagagtcactcaa gtccaccggttctgatgctggtgggaagcaagcattggcaaaacgccgggccaaccagcaagatacggaaagcttctata tcatgaaattcaaagaatatctctctggacgaagtattcaaacaaaattgcaagcaaagcatgaccaaatgaaggaagcg atagagaaaggtgctgcggtggatagagaattagccaggccacagtcccagcgcatccggcggtcccgccctccctcgca ctatcatcaccagctcttcgagggtgacctacaggccttcttggaggcctcaggccaagcagtgccccttgtggtggaaa gttgcatccgcttcatcaacctccatggcctccagcatgaaggtattttccgtgtgcctggatctcaagcacaagtagca gagatcaggaatgcctttgagaaaggtgaggaccccttagcagatagctatgtacagcatgatttggattcagtggctgg agtgctaaaattgtactttcggggactggagaaacctctctttccttatgatattgttcctgagctgctggccaaagccc acctggaacctttagctgagcgcatctcacacctccgggctctcatttctcagcttccatctgcagtactggtggttctg cggtacctctttgctttcctcagccatttatctcagtacagcgatgagaatatgatggacccccacaacctagctgtctg cttcggccccaccctggtgacggtacctgcgggccaggatgccgtgtcagtgcagcctcacatcaatgaggtggtaaagt gcctgatcgtccatcatgaagccatctttcctggagttaatcagctgcctgggccccagtatgagaaagtcatggctctg gctgaagaagaatactgtgatgtcttgccccttgagactacagcagaagagcccgagactgaggggaccccagaaactcc agcaaaaggcgactcccaatcagaagctgtgccccgctctggtcccatagctcaacctgaagagcggtttgtgcgaggaa tcccagttggctggcggcgaggtgaacgtggtggcaaccgaggattagtaccacccattgtcttaccagacagtgaaaaa caatctaacacccgcagttccaggttagagattgatactggaccatctctggaggaactgctccctgaacccacaagcag gctgcgtgtcaattcagatgtgagccgccagcgtggagggagcagccccattcgcaaattggcatcaccgttcatggatg ggggccgcctgccctttcccatccttcaaccaacccaggccaagacctttcaccctgttgatcggccagatcgctggaat gaagtttctccacggacctgggctggcaataactttgagagacagggaccagtggagaaacgggtagagatagaccggga ggttgccagaaatatggattctgtgttcaaagaacttcttgggaaaactactctgaagcacacagggatttgtgaccctc ccaatcattctgaacccccaaagagcaattctttggctaagaagggtatcacccctgccaagccagcctcttcaaacagg gcgcttctgcggggcaaaggggtcttcaagtctttgggaaatggagaggagcagaattctgtgcccaatgccgcatcctg tgagtttcttgcgaattacagcatatgtacagccctggtattagcttgtcattaacaaaaatgactgtactgtgatcttt ctatacagtctgttgatttctgtctcttgcaataaactggatttataaactctccaca |
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| Transcript ID | habu1_s1426_g05169.t2 |
| Definition | - |
>habu1_s1426_g05169.t2 tggcggccctgctgcgccctgccacaacccgtcgagatgaacgcgccggggaaagcgcgccgcgagcgaggcagcctggc cgaatacgagaaccaagtgaaagaaatgcgctggcagatgggggagcaagtccgaggtcttgactctcaggcagagagtc ggcaacagttgctccaagatgtggctgacttcctgcgccggaaggctgaagtggaacaagaatattcccgaggacttgag aaattgtctgaacgcttctcggctaagatacgtggctccaaggagcatcagaatttcaggaaggatcagaatctcccttc tcctttgaattgctggtatacaatactgaatcagacacggcaggcaagccgggatcatggagcactgagtgaaatctaca cagggcatttggtgcttcggttggtgcacatcagcgaggatgtggggcgattggcccggaaaagcaaagagatggaacag cagatgcaggatgagctcctgaaggcaatttcagagttgcagatggctatgaagtcataccagacataccgcattgattg tctgaatgccgaggcaaagctgcgtgaggctgaacggcaagaggagaagcgcagtggtggaaagcattctgatcctagtg gatccccgggtggggcaggacttgacaaaaacccccgtcgcacttcacttcggaaggtggagcgcctcctggaaaagaga cagtcgaaattcctggaaagcaagctgaaatgtgccaaggctcggaatgattacttgttgaatctacacactgctaactc tgccatgagcaactactatgtacgcgatgtggctgacctgctagataatctactgcacactttatcccattggaaaagat atggggatcagtcaacagtggagcctaatgaccatcaggctggtttgataactaaagatatctttatcacatggttccag tgttttgaccttggtttccacctttcgctgggcaaagtactgaggacctacctagccgcagagtcacgggcccaagcatc ttggcaacagggcctatgcgccattgaaggggcagttgatgctttggatccattgggagataagtccaggatgatggagg ccaaccctgcagcttattgccctcctctgtcatttgactaccagcctcatgaaggtgatgaggtatctgaagtccgggct gagggtccactgagaaatgaactagtttcccgtttccagcacattcagtcccgcctcaatgccatcaccctggagacaga tgaagtcaacaagactctgaaggctaccttgcaaagtctgatagatcttgtgacagcagaggagccagaggcacttgatg cctttcaaggctgtcagtctacagagtcactcaagtccaccggttctgatgctggtgggaagcaagcattggcaaaacgc cgggccaaccagcaagatacggaaagcttctatatcatgaaattcaaagaatatctctctggacgaagtattcaaacaaa attgcaagcaaagcatgaccaaatgaaggaagcgatagagaaaggtgctgcggtggatagagaattagccaggccacagt cccagcgcatccggcggtcccgccctccctcgcactatcatcaccagctcttcgagggtgacctacaggccttcttggag gcctcaggccaagcagtgccccttgtggtggaaagttgcatccgcttcatcaacctccatggcctccagcatgaaggtat tttccgtgtgcctggatctcaagcacaagtagcagagatcaggaatgcctttgagaaaggtgaggaccccttagcagata gctatgtacagcatgatttggattcagtggctggagtgctaaaattgtactttcggggactggagaaacctctctttcct tatgatattgttcctgagctgctggccaaagcccacctggaacctttagctgagcgcatctcacacctccgggctctcat ttctcagcttccatctgcagtactggtggttctgcggtacctctttgctttcctcagccatttatctcagtacagcgatg agaatatgatggacccccacaacctagctgtctgcttcggccccaccctggtgacggtacctgcgggccaggatgccgtg tcagtgcagcctcacatcaatgaggtggtaaagtgcctgatcgtccatcatgaagccatctttcctggagttaatcagct gcctgggccccagtatgagaaagtcatggctctggctgaagaagaatactgtgatgtcttgccccttgagactacagcag aagagcccgagactgaggggaccccagaaactccagcaaaaggcgactcccaatcagaagctgtgccccgctctggtccc atagctcaacctgaagagcggtttgtgcgaggaatcccagttggctggcggcgaggtgaacgtggtggcaaccgaggatt agtaccacccattgtcttaccagacagtgaaaaacaatctaacacccgcagttccaggttagagattgatactggaccat ctctggaggaactgctccctgaacccacaagcaggctgcgtgtcaattcagatgtgagccgccagcgtggagggagcagc cccattcgcaaattggcatcaccgttcatggatgggggccgcctgccctttcccatccttcaaccaacccaggccaagac ctttcaccctgttgatcggccagatcgctggaatgaagtttctccacggacctgggctggcaataactttgagagacagg gaccagtggagaaacgggtagagatagaccgggaggttgccagaaatatggattctgtgttcaaagaacttcttgggaaa actactctgaagcacacagggatttgtgaccctcccaatcattctgaacccccaaagagcaattctttggctaagaaggg tatcacccctgccaagccagcctcttcaaacagggcgcttctgcggggcaaaggggtcttcaagtctttgggaaatggag aggagcagaattctgtgcccaatgccgcatcctgtgagtttcttgcgaattacagcatatgtacagccctggtattagct tgtcattaacaaaaatgactgtactgtgatctttctatacagtctgttgatttctgtctcttgcaataaactggatttat aaactctccaca |
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Protein
| Protein ID | habu1_s1426_g05169.t1 |
|---|---|
| Definition | - |
>habu1_s1426_g05169.t1 MNAPGKARRERGSLAEYENQVKEMRWQMGEQVRGLDSQAESRQQLLQDVADFLRRKAEVEQEYSRGLEKLSERFSAKIRG SKEHQNFRKDQNLPSPLNCWYTILNQTRQASRDHGALSEIYTGHLVLRLVHISEDVGRLARKSKEMEQQMQDELLKAISE LQMAMKSYQTYRIDCLNAEAKLREAERQEEKRSGGKHSDPSGSPGGAGLDKNPRRTSLRKVERLLEKRQSKFLESKLKCA KARNDYLLNLHTANSAMSNYYVRDVADLLDCFDLGFHLSLGKVLRTYLAAESRAQASWQQGLCAIEGAVDALDPLGDKSR MMEANPAAYCPPLSFDYQPHEGDEVSEVRAEGPLRNELVSRFQHIQSRLNAITLETDEVNKTLKATLQSLIDLVTAEEPE ALDAFQGCQSTESLKSTGSDAGGKQALAKRRANQQDTESFYIMKFKEYLSGRSIQTKLQAKHDQMKEAIEKGAAVDRELA RPQSQRIRRSRPPSHYHHQLFEGDLQAFLEASGQAVPLVVESCIRFINLHGLQHEGIFRVPGSQAQVAEIRNAFEKGEDP LADSYVQHDLDSVAGVLKLYFRGLEKPLFPYDIVPELLAKAHLEPLAERISHLRALISQLPSAVLVVLRYLFAFLSHLSQ YSDENMMDPHNLAVCFGPTLVTVPAGQDAVSVQPHINEVVKCLIVHHEAIFPGVNQLPGPQYEKVMALAEEEYCDVLPLE TTAEEPETEGTPETPAKGDSQSEAVPRSGPIAQPEERFVRGIPVGWRRGERGGNRGLVPPIVLPDSEKQSNTRSSRLEID TGPSLEELLPEPTSRLRVNSDVSRQRGGSSPIRKLASPFMDGGRLPFPILQPTQAKTFHPVDRPDRWNEVSPRTWAGNNF ERQGPVEKRVEIDREVARNMDSVFKELLGKTTLKHTGICDPPNHSEPPKSNSLAKKGITPAKPASSNRALLRGKGVFKSL GNGEEQNSVPNAASCEFLANYSICTALVLACH |
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| Protein ID | habu1_s1426_g05169.t2 |
| Definition | - |
>habu1_s1426_g05169.t2 MNAPGKARRERGSLAEYENQVKEMRWQMGEQVRGLDSQAESRQQLLQDVADFLRRKAEVEQEYSRGLEKLSERFSAKIRG SKEHQNFRKDQNLPSPLNCWYTILNQTRQASRDHGALSEIYTGHLVLRLVHISEDVGRLARKSKEMEQQMQDELLKAISE LQMAMKSYQTYRIDCLNAEAKLREAERQEEKRSGGKHSDPSGSPGGAGLDKNPRRTSLRKVERLLEKRQSKFLESKLKCA KARNDYLLNLHTANSAMSNYYVRDVADLLDNLLHTLSHWKRYGDQSTVEPNDHQAGLITKDIFITWFQCFDLGFHLSLGK VLRTYLAAESRAQASWQQGLCAIEGAVDALDPLGDKSRMMEANPAAYCPPLSFDYQPHEGDEVSEVRAEGPLRNELVSRF QHIQSRLNAITLETDEVNKTLKATLQSLIDLVTAEEPEALDAFQGCQSTESLKSTGSDAGGKQALAKRRANQQDTESFYI MKFKEYLSGRSIQTKLQAKHDQMKEAIEKGAAVDRELARPQSQRIRRSRPPSHYHHQLFEGDLQAFLEASGQAVPLVVES CIRFINLHGLQHEGIFRVPGSQAQVAEIRNAFEKGEDPLADSYVQHDLDSVAGVLKLYFRGLEKPLFPYDIVPELLAKAH LEPLAERISHLRALISQLPSAVLVVLRYLFAFLSHLSQYSDENMMDPHNLAVCFGPTLVTVPAGQDAVSVQPHINEVVKC LIVHHEAIFPGVNQLPGPQYEKVMALAEEEYCDVLPLETTAEEPETEGTPETPAKGDSQSEAVPRSGPIAQPEERFVRGI PVGWRRGERGGNRGLVPPIVLPDSEKQSNTRSSRLEIDTGPSLEELLPEPTSRLRVNSDVSRQRGGSSPIRKLASPFMDG GRLPFPILQPTQAKTFHPVDRPDRWNEVSPRTWAGNNFERQGPVEKRVEIDREVARNMDSVFKELLGKTTLKHTGICDPP NHSEPPKSNSLAKKGITPAKPASSNRALLRGKGVFKSLGNGEEQNSVPNAASCEFLANYSICTALVLACH |
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