Gene
| Gene Model ID | habu1_s1426_g05173 |
|---|---|
| Locus | habu1_scaffold1426 : 2633400 ... 2641421 : + |
| To GenomeBrowser | habu1_scaffold1426:2633400..2641421 |
| Genes list of scaffold | habu1_scaffold1426 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| ras-related protein rab- partial | GO:0005525 GO:0007264 GO:0015031 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s1426_g05173.t2 | 1 | 1 | Arf | 4 | 165 | 4.8e-10 | 38.9 | 7.3e-13 | 5.4e-10 | 38.7 |
| habu1_s1426_g05173.t2 | 1 | 1 | Ras | 8 | 171 | 0.0 | 174.6 | 0.0 | 0.0 | 174.4 |
| habu1_s1426_g05173.t2 | 1 | 1 | Miro | 8 | 126 | 1.7e-18 | 67.2 | 4.8e-21 | 3.6e-18 | 66.2 |
| habu1_s1426_g05173.t2 | 1 | 1 | MMR_HSR1 | 8 | 105 | 9.9e-07 | 28.7 | 2.0e-09 | 1.5e-06 | 28.1 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 5.7 |
| Venom grand-1 | 6.4 |
| Pit, infrared sensing | 6.7 |
| Nose | 11.8 |
| Brain-1 | 0.6 |
| Eye | 2.0 |
| fetal fibroblast | 0.1 |
| venom gland-2 | 2.5 |
| Brain-2 | 0.2 |
| Spleen | 0.9 |
| Lung | 15.3 |
| Liver | 0.7 |
| Kidney | 5.3 |
| Pancreas | 1.9 |
| Small intestine | 21.0 |
| Large intestine | 62.2 |
| Stomach | 41.2 |
| heart | 0.1 |
| ovary | 74.2 |
| cheek muscle | 2.8 |
Transcript
| Transcript ID | habu1_s1426_g05173.t1 |
|---|---|
| Definition | - |
>habu1_s1426_g05173.t1 ccttcctcctttggtcaattgctccctccaagctatcggctgctgggagaaacgggttctggcggagacgccccatgttc agacgttcacacctcaaaatcctgcttattgggaattcaggggtgggcaagtctgccctgatgaaccagtatgttaacaa ccgcttcagtagccgcttcagagccaccattggagcagacttcctcagcaaagaagtacacattgatggccgcaccctga tagtgcagatctgggatacagctggtacggaaaggttccatgcgctggggactgccctttatcggggatctgactgctgc ctgctcgtctttgatgtcacatctatctattcttttcaagccctcgagaagtggcacaagcagctcttgttgcagattga gccagaggaagaacccacttttcccattgccatcattggaaacaagactgacctggagaatcgtgaggtttcttcagagg aagccgaaatgtggagcaggcttcatgatgctacctactttgaagccagtgccaagacagctgccaatgtgccggaggtg tttgagtgggccatacgggctgtactgaagaaccgcaaggtacccgaagagccacagctcaattctgttcacctagagac caggccgccagaagggacacaccgggaaaggtgtggctgctgataagcccaaatgcagatgggaggatttatttttcata cagatctttgacacgatgcaatgaacaagaacaggaagttagcccattgggcagtaacaagattctgccaaccctgcagc ctgtcactttggtagcttgatcccgtggtaagatttgtggccttctggaagagagatccttataactgaagaacctagat tgggtgttggatagtcttcatccaaacatatggaaataaatctcagtctgagacttttcagt |
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| Transcript ID | habu1_s1426_g05173.t2 |
| Definition | - |
>habu1_s1426_g05173.t2 gcgcgcgcttgcaagcaccttggtcttgctcctgggaggaaactgtgaggaacaacctgctttggcgcagtaccttccct ccctcgcagtttgagaagcgaaaaggcagaggcgggtgccctaggagttctggcggagacgccccatgttcagacgttca cacctcaaaatcctgcttattgggaattcaggggtgggcaagtctgccctgatgaaccagtatgttaacaaccgcttcag tagccgcttcagagccaccattggagcagacttcctcagcaaagaagtacacattgatggccgcaccctgatagtgcaga tctgggatacagctggtacggaaaggttccatgcgctggggactgccctttatcggggatctgactgctgcctgctcgtc tttgatgtcacatctatctattcttttcaagccctcgagaagtggcacaagcagctcttgttgcagattgagccagagga agaacccacttttcccattgccatcattggaaacaagactgacctggagaatcgtgaggtttcttcagaggaagccgaaa tgtggagcaggcttcatgatgctacctactttgaagccagtgccaagacagctgccaatgtgccggaggtgtttgagtgg gccatacgggctgtactgaagaaccgcaaggtacccgaagagccacagctcaattctgttcacctagagaccaggccgcc agaagggacacaccgggaaaggtgtggctgctgataagcccaaatgcagatgggaggatttatttttcatacagatcttt gacacgatgcaatgaacaagaacaggaagttagcccattgggcagtaacaagattctgccaaccctgcagcctgtcactt tggtagcttgatcccgtggtaagatttgtggccttctggaagagagatccttataactgaagaacctagattgggtgttg gatagtcttcatccaaacatatggaaataaatctcagtctgagacttttcagt |
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Protein
| Protein ID | habu1_s1426_g05173.t1 |
|---|---|
| Definition | - |
>habu1_s1426_g05173.t1 MFRRSHLKILLIGNSGVGKSALMNQYVNNRFSSRFRATIGADFLSKEVHIDGRTLIVQIWDTAGTERFHALGTALYRGSD CCLLVFDVTSIYSFQALEKWHKQLLLQIEPEEEPTFPIAIIGNKTDLENREVSSEEAEMWSRLHDATYFEASAKTAANVP EVFEWAIRAVLKNRKVPEEPQLNSVHLETRPPEGTHRERCGC |
|
| Protein ID | habu1_s1426_g05173.t2 |
| Definition | - |
>habu1_s1426_g05173.t2 MFRRSHLKILLIGNSGVGKSALMNQYVNNRFSSRFRATIGADFLSKEVHIDGRTLIVQIWDTAGTERFHALGTALYRGSD CCLLVFDVTSIYSFQALEKWHKQLLLQIEPEEEPTFPIAIIGNKTDLENREVSSEEAEMWSRLHDATYFEASAKTAANVP EVFEWAIRAVLKNRKVPEEPQLNSVHLETRPPEGTHRERCGC |
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