Gene
| Gene Model ID | habu1_s1426_g05175 |
|---|---|
| Locus | habu1_scaffold1426 : 2721842 ... 2803009 : - |
| To GenomeBrowser | habu1_scaffold1426:2721842..2803009 |
| Genes list of scaffold | habu1_scaffold1426 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| methyl- -binding protein 2 | GO:0003677 GO:0005515 GO:0005634 GO:0005737 GO:0006066 GO:0006576 GO:0006650 GO:0007416 GO:0007420 GO:0007585 GO:0007600 GO:0007612 GO:0007613 GO:0009628 GO:0016571 GO:0016573 GO:0031057 GO:0031175 GO:0033555 GO:0040029 GO:0044822 GO:0045892 GO:0048167 GO:0048522 GO:0050884 GO:0051179 GO:0051239 GO:0051704 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s1426_g05175.t1 | 1 | 1 | MBD | 90 | 157 | 1.6e-21 | 75.6 | 5.2e-25 | 3.9e-21 | 74.3 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s1426_g05175.t1 | gi|602627264|ref|XP_007420580.1| | PREDICTED: methyl-CpG-binding protein 2 [Python bivittatus] | 0.0 |
| habu1_s1426_g05175.t1 | gi|637264863|ref|XP_008102122.1| | PREDICTED: methyl-CpG-binding protein 2 [Anolis carolinensis] | 0.0 |
| habu1_s1426_g05175.t1 | gi|410989629|ref|XP_004001061.1| | PREDICTED: methyl-CpG-binding protein 2 [Felis catus] | 0.0 |
| habu1_s1426_g05175.t1 | gi|556723975|ref|XP_005957798.1| | PREDICTED: methyl-CpG-binding protein 2 [Pantholops hodgsonii] | 0.0 |
| habu1_s1426_g05175.t1 | gi|330864700|ref|NP_001193481.1| | methyl-CpG-binding protein 2 [Bos taurus] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 1.6 |
| Venom grand-1 | 0.6 |
| Pit, infrared sensing | 0.9 |
| Nose | 0.6 |
| Brain-1 | 5.1 |
| Eye | 2.7 |
| fetal fibroblast | 3.2 |
| venom gland-2 | 1.6 |
| Brain-2 | 5.2 |
| Spleen | 3.5 |
| Lung | 1.7 |
| Liver | 1.5 |
| Kidney | 3.7 |
| Pancreas | 3.3 |
| Small intestine | 3.0 |
| Large intestine | 1.5 |
| Stomach | 1.1 |
| heart | 3.2 |
| ovary | 6.4 |
| cheek muscle | 4.2 |
Transcript
| Transcript ID | habu1_s1426_g05175.t1 |
|---|---|
| Definition | - |
>habu1_s1426_g05175.t1 ccctccccccccgcgggttcttcgctgcgaagaaaatggcggcggcgccgagcggagatgaagagagactggaagaaaaa tctgaggaccaagatttacagggtctaaaggacaaatcctccaaatgtaaaaaagtcaagaaagagcggaaagaagaaaa gcaacgtgagcatgcccagccctctgtggagccagctgaagcaggcaaggcagaaatgtcggaaggagctggaactgctc cagctgtacctgaggcctctgcatctccaaaacagcgccgctctgtcatccgagatcgtggtcccatgtatgatgatccc actttgcctgagggctggactcgcaaactcaagcagagaaaatccggacgctcggcggggaagtatgacgtctatcttat caacccccaaggcaaggcctttcgttctaaagttgagctcatcgcctactttgagaaggtgggagatacttctctggatc ctaatgattttgatttcacggtgactggacgtgggagcccctcacgacgagaacagaagcctcctaagaaaactaaagcc cctaaaactactggcacaggccgtggacggggtcgacccaaaggtagtggctctaccaaacctagaggaactgcttcaga aggcgtacaggtgaaaagggtaattgagaagagttcgggaaagctgctagtcaagatgcctttgcaatcgtcttcgatgg gagcaaaggcagaaggaacagggggggctaccacctcagcacaggtcatggtgatcaagcgtcctgggcgtaaacggaaa cctgaatcagatccccaggctgtgcctaagaaacggggacgaaagccaggcagcagtgcagtagcagctgttgccgaagc taagaagaaaacagtcaaggagccagtcatccaggcagtccgggagacagtattgcccatcaagaaacgtaagacacgtg aggctgtcagtatagagatcaccaagccaagtcctcctcctccaagcaacacaggggaatggagttccaaaggacagcga acggctgccaagagcccagggcgccgcagcaaagaaagcagccctaaagggcggggtggcaatgctgtgtcaacccctgc cccttcctcttctcctggcaagaaggatcagcacctccctccccatcagccatctttggagccccagggcacctcccctg ctcagtcccctgaaagccctaaggacagcaagagccttccaactgagccccaggacttgagcagcaagagctataaagag gagagggctccagaaagtgatggctgtcctaaagagccacctaagactcaatctggtggcacagccgtgtcctacaaaca tgagcgcaaagatactgtgtcgtcctccacggccttgtcccggcctacaaacagggacgaggccgtggataccaggacac ctgtgtcagagcgggtcagctgactttgcgggggtgttgcttatgcttgcatgagtgattgctgagttgttcagtttgtg tcacacttaataattttgtattaaagcttttgtttcgttatctttga |
|
Protein
| Protein ID | habu1_s1426_g05175.t1 |
|---|---|
| Definition | - |
>habu1_s1426_g05175.t1 MAAAPSGDEERLEEKSEDQDLQGLKDKSSKCKKVKKERKEEKQREHAQPSVEPAEAGKAEMSEGAGTAPAVPEASASPKQ RRSVIRDRGPMYDDPTLPEGWTRKLKQRKSGRSAGKYDVYLINPQGKAFRSKVELIAYFEKVGDTSLDPNDFDFTVTGRG SPSRREQKPPKKTKAPKTTGTGRGRGRPKGSGSTKPRGTASEGVQVKRVIEKSSGKLLVKMPLQSSSMGAKAEGTGGATT SAQVMVIKRPGRKRKPESDPQAVPKKRGRKPGSSAVAAVAEAKKKTVKEPVIQAVRETVLPIKKRKTREAVSIEITKPSP PPPSNTGEWSSKGQRTAAKSPGRRSKESSPKGRGGNAVSTPAPSSSPGKKDQHLPPHQPSLEPQGTSPAQSPESPKDSKS LPTEPQDLSSKSYKEERAPESDGCPKEPPKTQSGGTAVSYKHERKDTVSSSTALSRPTNRDEAVDTRTPVSERVS |
|