Gene
| Gene Model ID | habu1_s1426_g05177 |
|---|---|
| Locus | habu1_scaffold1426 : 2843750 ... 2847886 : + |
| To GenomeBrowser | habu1_scaffold1426:2843750..2847886 |
| Genes list of scaffold | habu1_scaffold1426 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| long wavelength sensitive pigment | GO:0004930 GO:0007186 GO:0007601 GO:0007602 GO:0009881 GO:0016021 GO:0018298 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s1426_g05177.t1 | 1 | 1 | 7tm_1 | 70 | 321 | 1.60028e-42 | 145.4 | 1.4013e-45 | 2.40042e-42 | 144.8 |
| habu1_s1426_g05177.t1 | 1 | 1 | 7TM_GPCR_Srw | 212 | 338 | 7.9e-06 | 25.2 | 2.7e-09 | 7.9e-06 | 25.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s1426_g05177.t1 | gi|602627266|ref|XP_007420581.1| | PREDICTED: red-sensitive opsin-like [Python bivittatus] | 0.0 |
| habu1_s1426_g05177.t1 | gi|637264867|ref|XP_008102123.1| | PREDICTED: red-sensitive opsin [Anolis carolinensis] | 0.0 |
| habu1_s1426_g05177.t1 | gi|115529264|ref|NP_001070170.1| | red-sensitive opsin [Taeniopygia guttata] | 0.0 |
| habu1_s1426_g05177.t1 | gi|189027064|ref|NP_001121097.1| | red-sensitive opsin [Ornithorhynchus anatinus] | 0.0 |
| habu1_s1426_g05177.t1 | gi|395545766|ref|XP_003774769.1| | PREDICTED: long-wave-sensitive opsin 1 [Sarcophilus harrisii] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 0.0 |
| Venom grand-1 | 0.0 |
| Pit, infrared sensing | 0.0 |
| Nose | 0.0 |
| Brain-1 | 0.0 |
| Eye | 70.1 |
| fetal fibroblast | 0.0 |
| venom gland-2 | 0.0 |
| Brain-2 | 0.0 |
| Spleen | 0.0 |
| Lung | 0.0 |
| Liver | 0.0 |
| Kidney | 0.0 |
| Pancreas | 0.0 |
| Small intestine | 0.0 |
| Large intestine | 0.0 |
| Stomach | 0.0 |
| heart | 0.0 |
| ovary | 0.0 |
| cheek muscle | 0.0 |
Transcript
| Transcript ID | habu1_s1426_g05177.t1 |
|---|---|
| Definition | - |
>habu1_s1426_g05177.t1 tagactgttggatgggagagcctgatcagggactgagagaaggagcaacaagaaagagagaattgaggaagaaagagaac gtgggagaaagggagagggcaagaaacgcaaacaagggggaagacagtaaccaaggccatgacagaggcctggaatgtgg cagtatttgctgctcggcggcgcaacgatgacgaagatactactagggaaactgtatttgcttacaccaacagcaacaat acccgtgacccttttgaaggtccaaactatcatattgcaccacgatgggtctacaacttaacttcactctggatggtctt tgttgtcattgcctcagtctttaccaatggcttggtattggtggccacagccaaattcaagaaattacggcatccgctca actggattctggtgaacttggctatcgctgatttgggtgaaacagttattgctagcaccatcagtgtcatcaaccagttt tttggctatttcgtccttggccatcctttgtgtgttatagagggttatactgtctctgcttgtggcattacagctctctg gtctttggccattatttcctgggagcgctgggttgttgtttgcaaaccttttggaaatgtcaagtttgatgccaaaatgg ctcttggtggcattttcttctcctggatatgggcttgctcctggacagcaccaccaatgtttggctggagtagatactgg ccccatggtctgaaaacatcatgtggtccagatgtattcagtggcagtgaagagctaggtgtccaatcttacatgattgt cctgatgattacctgttgtataactcccctgagcatcattatcttctgctacttgcaagtgtggatggctatccgtgcgg ttgcagcccagcagaaggagtcagaatcaacacaaaaggcagagaaggaagtgtcaaggatggtagtggtcatgatcatt gcctatattgtctgctggggaccatatacattttttgcctgttttgctgttgccaatccaggctatgcctttcacccctt gacagcttccctgcctgccttctttgcaaaaagcgccaccatttacaacccaattatctatgtcttcatgaacagacagt tccgtaattgcataatgcagctctttggcaagaaagtggatgatggttctgaactttcctctacttcccgcactgaagtc tcatcggcctctaactcttctgtatcaccagcataagagctctttcttgatagattccctatgaatatctaacatattgg gctgctattgcacaaagccgttgcttggacttaagactgtgacccaggttgggtgcttctatttctcctagggagaggga ggtgtttccactttcctttcagaattgtttaggggtggcaatgaaaagttcatatctctatgttcaaatattccatcagt ctgaaactttcctgggcttcaggggttgttttgatgctcatcccttattgctgtatttttaattaatctttcatttatcc ttcggtctgcaagagaggcagaacaacgggggctccagtgaaaagtttatgacttttgtgaagcaggtctatcccatatt ttttatagagaatccactcatcttcaagatgccacttcctataaatgggtagatagtttgatgtatccacaaaaggtgat aaattagacatcagccacagcagttctattttgattatcttttgctctacctttcttacgaaatgtttgggtgagtgcag ggagtccattgaaaggaggctggagaatgaagttgttccctgcaatttctgtgtctcagcaggtttggagatactgattt ctagctctgcccaggaggaaacagttctggcagaaatcataaatgagactttgccgtagcactttggccaacccagagct ctgtatatctcctcagcatggctcgacaggacccactctgtacatagtatttgatattaaaatcacccatgttccatggg atatttagctagaaacgcaatgggtaaaattatttttaaaaactctacagcagcgagactgaataaattaatgtacaaaa acggttata |
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Protein
| Protein ID | habu1_s1426_g05177.t1 |
|---|---|
| Definition | - |
>habu1_s1426_g05177.t1 MTEAWNVAVFAARRRNDDEDTTRETVFAYTNSNNTRDPFEGPNYHIAPRWVYNLTSLWMVFVVIASVFTNGLVLVATAKF KKLRHPLNWILVNLAIADLGETVIASTISVINQFFGYFVLGHPLCVIEGYTVSACGITALWSLAIISWERWVVVCKPFGN VKFDAKMALGGIFFSWIWACSWTAPPMFGWSRYWPHGLKTSCGPDVFSGSEELGVQSYMIVLMITCCITPLSIIIFCYLQ VWMAIRAVAAQQKESESTQKAEKEVSRMVVVMIIAYIVCWGPYTFFACFAVANPGYAFHPLTASLPAFFAKSATIYNPII YVFMNRQFRNCIMQLFGKKVDDGSELSSTSRTEVSSASNSSVSPA |
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