Gene
Gene Model ID | habu1_s1426_g05179 |
---|---|
Locus | habu1_scaffold1426 : 2858970 ... 2869543 : + |
To GenomeBrowser | habu1_scaffold1426:2858970..2869543 |
Genes list of scaffold | habu1_scaffold1426 |
Annotation by Blast2GO
Annotation | GO |
---|---|
transketolase-like protein partial | EC:2.2.1.1 GO:0004802 GO:0006098 GO:0015976 GO:0046872 |
Hmmer Search for Pfam
query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
---|---|---|---|---|---|---|---|---|---|---|
habu1_s1426_g05179.t1 | 1 | 1 | Transketolase_N | 17 | 274 | 0.0 | 286.2 | 0.0 | 0.0 | 285.6 |
habu1_s1426_g05179.t1 | 1 | 1 | DXP_synthase_N | 123 | 189 | 4.7e-06 | 25.7 | 4.7e-06 | 0.01 | 14.8 |
habu1_s1426_g05179.t1 | 1 | 1 | E1_dh | 127 | 247 | 8.9e-12 | 44.3 | 7.3e-15 | 1.5e-11 | 43.5 |
habu1_s1426_g05179.t1 | 1 | 1 | Transket_pyr | 318 | 481 | 3.09995e-41 | 140.8 | 3.22299e-44 | 6.70003e-41 | 139.7 |
habu1_s1426_g05179.t1 | 1 | 1 | Transketolase_C | 497 | 561 | 2.3e-15 | 56.6 | 2.7e-18 | 5.8e-15 | 55.3 |
Blast Hit to nr / sp
query | Subject ID | Subject Name | evalue |
---|---|---|---|
habu1_s1426_g05179.t1 | gi|602627268|ref|XP_007420582.1| | PREDICTED: transketolase-like protein 2-like [Python bivittatus] | 0.0 |
habu1_s1426_g05179.t1 | gi|327264301|ref|XP_003216952.1| | PREDICTED: transketolase-like protein 1 [Anolis carolinensis] | 0.0 |
habu1_s1426_g05179.t1 | gi|395545768|ref|XP_003774770.1| | PREDICTED: transketolase-like protein 1 isoform X2 [Sarcophilus harrisii] | 0.0 |
habu1_s1426_g05179.t1 | gi|395545772|ref|XP_003774772.1| | PREDICTED: transketolase-like protein 1 isoform X1 [Sarcophilus harrisii] | 0.0 |
habu1_s1426_g05179.t1 | gi|573874523|ref|XP_006625644.1| | PREDICTED: transketolase-like protein 2-like isoform X2 [Lepisosteus oculatus] | 0.0 |
Expression profile
Libraries | FPKM |
---|---|
>Adult | |
Venom fang forming tissue | 5.4 |
Venom grand-1 | 1.2 |
Pit, infrared sensing | 5.7 |
Nose | 5.7 |
Brain-1 | 15.9 |
Eye | 6.7 |
fetal fibroblast | 58.8 |
venom gland-2 | 0.8 |
Brain-2 | 24.0 |
Spleen | 4.4 |
Lung | 1.7 |
Liver | 46.1 |
Kidney | 12.7 |
Pancreas | 5.2 |
Small intestine | 3.6 |
Large intestine | 1.8 |
Stomach | 2.7 |
heart | 0.5 |
ovary | 64.1 |
cheek muscle | 0.8 |
Transcript
Transcript ID | habu1_s1426_g05179.t1 |
---|---|
Definition | - |
>habu1_s1426_g05179.t1 aatttccccagcctctgagctcacttcctctcgcaggaggagcgccggccagccggagaaaaaaagagcaaagcgtgctt tgcgcatctggatagtaggagcttcatcatggccagcagctaccttaagccgaaggagaaaactctgcaaaacctacgag atattgctagtcgccttcggattcactctattcgggcaacttgcgcttcgaactccggacacccaacatcatgttgcagt gcagcagagatcatgtctgtgttgttctttcataccatgcgctacaggccaaatgaaccaggccaccccagcaacgaccg ctttgtgctctcaaagggtcatgctgcgcctatactctatgctgcatgggcagaagctggctttatcaaggagcctgagc tgttaaatttgaggaaaatagactctgacctggaaggtcacccgactcctagacttccttttgtggatgtggccactggt tccttggggcagggtctgggagctgcctgtggaatggcctatacaggaaaatactttgataaaaccagttaccgagttta ctgcctactgggtgatggtgaatcctctgagggatcagtatgggaagccctacaatttgggtctcactatcaattggata atctagtggccattattgatgtgaaccggctgggacaaagtgaagcagcaccactgggccatgatacagatgtttatcat aagcgctgtgaagcctttggatggaatacctgtgttgtggatggtcatgatatggaggaactatgccaggctttatggca agcaagtcaacaaaaggggaagcccaccatgattgtggccaagactttcaaaggacgaggaatcccaggtgtggagaata ctgacaattggcatggaaagcccattccaaaagacaaagtggaatctattatctctactattcagagtcaaatccagact agtgatgtttgtactatccagccacctgctcaagatgtgccaccagtcaatattgtggatatcagaatgccttctttacc tacctataatataggagaaaaggtggctacccgcaaagcctatggtttagccctggtaaaactgggaaagactaacaagc atgtggttgttttggatggtgacacaaaaaactccacttttgctgagcttttcaaacaggcccatccagaacgctatata gagtgttacattgctgagcagaacatggtgagtgttgctctgggctgtgctgctaggaaccgcaccattgcatttgccag cacctttgctgcctttttcactcgagcatttgaccatatccggatggctgctatctcacaatcaaacattaagctttgtg ggtcacacagtggggtttctataggagaggatgggccctctcagatggctttggaagatctagccatgttcagaactatt ccaggttgtactgtgttttacccaagtgacgcagtctccactgagtatgctgtttgtttggcagcaaacactaagggaat atgcttcattcgtaccagtcgtccagaaactcctatcctgtattctcaggaagaaaagtttgaggttggccatgccaagg tagtccgtataagtgatgctgacagagtaacggttattggagcaggtgtcacacttcatgaagccctttcagctgccgat gaactagccaaacaagagatctatatccgggtaattgatccatttacaatcaaacctttggatgctgataccatcatttc caatgccagagccactaggggacatatcattacagtggtattggtgaagctgtggctgcagctgtctctggagaacctgg aattttagtccagagtctagctgtgtcaggtgtgcctcggagtggaaaacctgctgagctcttagatctctttgggatca gtgcaaaacacataataacagctgtgaagagcacctttgccaattgatttgacagggatgtagtaaagaagggttatgaa attatgaaa |
Protein
Protein ID | habu1_s1426_g05179.t1 |
---|---|
Definition | - |
>habu1_s1426_g05179.t1 MASSYLKPKEKTLQNLRDIASRLRIHSIRATCASNSGHPTSCCSAAEIMSVLFFHTMRYRPNEPGHPSNDRFVLSKGHAA PILYAAWAEAGFIKEPELLNLRKIDSDLEGHPTPRLPFVDVATGSLGQGLGAACGMAYTGKYFDKTSYRVYCLLGDGESS EGSVWEALQFGSHYQLDNLVAIIDVNRLGQSEAAPLGHDTDVYHKRCEAFGWNTCVVDGHDMEELCQALWQASQQKGKPT MIVAKTFKGRGIPGVENTDNWHGKPIPKDKVESIISTIQSQIQTSDVCTIQPPAQDVPPVNIVDIRMPSLPTYNIGEKVA TRKAYGLALVKLGKTNKHVVVLDGDTKNSTFAELFKQAHPERYIECYIAEQNMVSVALGCAARNRTIAFASTFAAFFTRA FDHIRMAAISQSNIKLCGSHSGVSIGEDGPSQMALEDLAMFRTIPGCTVFYPSDAVSTEYAVCLAANTKGICFIRTSRPE TPILYSQEEKFEVGHAKVVRISDADRVTVIGAGVTLHEALSAADELAKQEIYIRVIDPFTIKPLDADTIISNARATRGHI ITVVLVKLWLQLSLENLEF |