Gene
| Gene Model ID | habu1_s1426_g05183 |
|---|---|
| Locus | habu1_scaffold1426 : 2952490 ... 2955986 : + |
| To GenomeBrowser | habu1_scaffold1426:2952490..2955986 |
| Genes list of scaffold | habu1_scaffold1426 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| three prime repair exonuclease 2 | GO:0003676 GO:0004527 GO:0090305 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s1426_g05183.t2 | 1 | 1 | RNase_T | 11 | 191 | 3.7e-08 | 33.8 | 6.8e-12 | 5.1e-08 | 33.3 |
| habu1_s1426_g05183.t2 | 1 | 1 | RNase_H_2 | 91 | 170 | 6.8e-06 | 25.9 | 2.8e-07 | 0.0021 | 17.9 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 10.9 |
| Venom grand-1 | 1.9 |
| Pit, infrared sensing | 6.0 |
| Nose | 21.8 |
| Brain-1 | 1.0 |
| Eye | 1.6 |
| fetal fibroblast | 24.4 |
| venom gland-2 | 0.5 |
| Brain-2 | 1.8 |
| Spleen | 0.7 |
| Lung | 4.3 |
| Liver | 2.7 |
| Kidney | 3.6 |
| Pancreas | 0.3 |
| Small intestine | 1.1 |
| Large intestine | 0.8 |
| Stomach | 1.1 |
| heart | 2.4 |
| ovary | 1.2 |
| cheek muscle | 1.4 |
Transcript
| Transcript ID | habu1_s1426_g05183.t1 |
|---|---|
| Definition | - |
>habu1_s1426_g05183.t1 cctggagaattgctgcgagatgatgatgatagtagtcagggacactttatggcactcagaaatacaacctggacaggttc ttggtggatgaagcaatgcttgataaaaccacataattgttgctaacagtgattctaacacactttgcttttgtgccagc catgactgaacctcagaactaccaaacgtttgtcttccttgacattgagtccactggcttgcccagagaccaacctggca tagcggagctgtgcctctttgctgttcaccaatcttccctacagccctctctgcggacaaaagaaccacagctccctcgc atcatagacaaactcaccctctgcgttgatccccggaaaccctttactctgggcgcagagagtataacagggctgagcaa ccaaaagctggaacagaattgcaagcctgaaatcaaccgttctttgatggagaccctgaaaggatttttagaccggcaag ctcagcccatttgcttagtggcccacaatggtctccgcttcgactttcccttgctgcgtaaagaactgtggcaaataggt actgacctgcctgcaaatacaggatgcctcgacacattgaaggctttgaaggatgtgcttggagaaccgcacctgagcta taagctgggaaatctctaccagcacttctatagagaggaaccatccagagcccacacagctgaaggagatgtgcttactc ttctcctcgtgtttcttgctaaggcccttgagctgaaggcttgggcagcccatcaggcccagatgtggaaggagattcaa cctatggattttccctacccaaacaggatctgatctctggggaaaaaattatcctatctccgcctgtcttccattattct gaaccattaatttttaaatgatgttttgttgattaaaccataatttgtaagcttgttct |
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| Transcript ID | habu1_s1426_g05183.t2 |
| Definition | - |
>habu1_s1426_g05183.t2 cctggagaattgctgcgagccatgactgaacctcagaactaccaaacgtttgtcttccttgacattgagtccactggctt gcccagagaccaacctggcatagcggagctgtgcctctttgctgttcaccaatcttccctacagccctctctgcggacaa aagaaccacagctccctcgcatcatagacaaactcaccctctgcgttgatccccggaaaccctttactctgggcgcagag agtataacagggctgagcaaccaaaagctggaacagaattgcaagcctgaaatcaaccgttctttgatggagaccctgaa aggatttttagaccggcaagctcagcccatttgcttagtggcccacaatggtctccgcttcgactttcccttgctgcgta aagaactgtggcaaataggtactgacctgcctgcaaatacaggatgcctcgacacattgaaggctttgaaggatgtgctt ggagaaccgcacctgagctataagctgggaaatctctaccagcacttctatagagaggaaccatccagagcccacacagc tgaaggagatgtgcttactcttctcctcgtgtttcttgctaaggcccttgagctgaaggcttgggcagcccatcaggccc agatgtggaaggagattcaacctatggattttccctacccaaacaggatctgatctctggggaaaaaattatcctatctc cgcctgtcttccattattctgaaccattaatttttaaatgatgttttgttgattaaaccataatttgtaagcttgttct |
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Protein
| Protein ID | habu1_s1426_g05183.t1 |
|---|---|
| Definition | - |
>habu1_s1426_g05183.t1 MTEPQNYQTFVFLDIESTGLPRDQPGIAELCLFAVHQSSLQPSLRTKEPQLPRIIDKLTLCVDPRKPFTLGAESITGLSN QKLEQNCKPEINRSLMETLKGFLDRQAQPICLVAHNGLRFDFPLLRKELWQIGTDLPANTGCLDTLKALKDVLGEPHLSY KLGNLYQHFYREEPSRAHTAEGDVLTLLLVFLAKALELKAWAAHQAQMWKEIQPMDFPYPNRI |
|
| Protein ID | habu1_s1426_g05183.t2 |
| Definition | - |
>habu1_s1426_g05183.t2 MTEPQNYQTFVFLDIESTGLPRDQPGIAELCLFAVHQSSLQPSLRTKEPQLPRIIDKLTLCVDPRKPFTLGAESITGLSN QKLEQNCKPEINRSLMETLKGFLDRQAQPICLVAHNGLRFDFPLLRKELWQIGTDLPANTGCLDTLKALKDVLGEPHLSY KLGNLYQHFYREEPSRAHTAEGDVLTLLLVFLAKALELKAWAAHQAQMWKEIQPMDFPYPNRI |
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