Gene
| Gene Model ID | habu1_s1426_g05188 |
|---|---|
| Locus | habu1_scaffold1426 : 3111028 ... 3141613 : + |
| To GenomeBrowser | habu1_scaffold1426:3111028..3141613 |
| Genes list of scaffold | habu1_scaffold1426 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| protein phosphatase 1 regulatory subunit 3f | GO:0016020 GO:0044763 GO:0050794 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s1426_g05188.t1 | 1 | 1 | CBM_21 | 226 | 340 | 6.8e-27 | 93.6 | 7.3e-30 | 9.1e-27 | 93.2 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s1426_g05188.t1 | gi|637264917|ref|XP_008102130.1| | PREDICTED: LOW QUALITY PROTEIN: protein phosphatase 1 regulatory subunit 3F [Anolis carolinensis] | 0.0 |
| habu1_s1426_g05188.t1 | gi|641783120|ref|XP_008173965.1| | PREDICTED: protein phosphatase 1 regulatory subunit 3F [Chrysemys picta bellii] | 0.0 |
| habu1_s1426_g05188.t1 | gi|612059648|ref|XP_007507774.1| | PREDICTED: protein phosphatase 1 regulatory subunit 3F [Monodelphis domestica] | 0.0 |
| habu1_s1426_g05188.t1 | gi|556995374|ref|XP_006001497.1| | PREDICTED: uncharacterized protein LOC102356862 [Latimeria chalumnae] | 2.0e-40 |
| habu1_s1426_g05188.t1 | gi|759192779|ref|XP_011383446.1| | PREDICTED: protein phosphatase 1 regulatory subunit 3F [Pteropus vampyrus] | 4.0e-37 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 1.3 |
| Venom grand-1 | 1.0 |
| Pit, infrared sensing | 1.4 |
| Nose | 1.4 |
| Brain-1 | 5.7 |
| Eye | 3.3 |
| fetal fibroblast | 3.7 |
| venom gland-2 | 3.4 |
| Brain-2 | 7.7 |
| Spleen | 2.4 |
| Lung | 2.0 |
| Liver | 2.5 |
| Kidney | 1.3 |
| Pancreas | 1.7 |
| Small intestine | 0.8 |
| Large intestine | 1.5 |
| Stomach | 2.4 |
| heart | 4.7 |
| ovary | 31.9 |
| cheek muscle | 9.2 |
Transcript
| Transcript ID | habu1_s1426_g05188.t1 |
|---|---|
| Definition | - |
>habu1_s1426_g05188.t1 ggcagcttcggcaatagcagcagcagctgtctgcgccgctagtccgccgtcctcccagccgcccgccatggctcgcgcgg gggcctcctcctcctccccgccaccgccgccacaacctcccttgccactcactcgggaggcggccgaggaggaggaggag gaggaagaggaggaggaggaagacgacgacgacgaagaagaagacggagaggaggaggaggaggaggaggaagatccccc agcccgggctctcatgccacgctcctccccggtccccaggcctcagcaccccagcgccccagagagctgctcttcgtcag aggacgacggggaggatgatgggcaccaccagcacccttgcttggccaggccactctctcagcatcccccaggcctgcct gggccaccttcccagcatgcagtgcaggactgccgagggctcccctcccagcatgctcaagggcaccctggactgttttc ccaacatgccactgcagctgccatccctatggaggagccctctcagcacaccgcaggccggcatgtgctgtttgctgatg ccttgggcttgcccttggcacgttggcggcgctaccagccttggcccccaccttccccagagtctccccctgaggtggca ccttccttggcctccctccctccctccacaagcaccccctaccttttgccatcttttgtgttgcaaccagtggggcaaga tgaggatgagaagcttgaacggctgcaccaggccaaggtagaattggaagaagttttgccacaagagcctggagagccac gagtgcttcgtggtactgtgcgtgtgctcaacatttcttaccacaaggctgtgcatgtgcgggccagcagagaccggtgg caaagtcaccgggattaccccgccctctatattccagggggctcaccagatggaggcctgactgaccggtttgccttccg cctggagtttggcgatgaggatgaggaagatgaggaagaaggaggagcccggcttgattttgtggtgcgctatcagaccg aagaaggagtttactgggccaataatcagggcaagaattatagtgtggtactgaagggggcagcgactacccaagttcta cccacgaggtcttctaaagaaggtgaatcacggcggctcaagagctgtatgaggccagtcaaaatcag |
|
Protein
| Protein ID | habu1_s1426_g05188.t1 |
|---|---|
| Definition | - |
>habu1_s1426_g05188.t1 MARAGASSSSPPPPPQPPLPLTREAAEEEEEEEEEEEEDDDDEEEDGEEEEEEEEDPPARALMPRSSPVPRPQHPSAPES CSSSEDDGEDDGHHQHPCLARPLSQHPPGLPGPPSQHAVQDCRGLPSQHAQGHPGLFSQHATAAAIPMEEPSQHTAGRHV LFADALGLPLARWRRYQPWPPPSPESPPEVAPSLASLPPSTSTPYLLPSFVLQPVGQDEDEKLERLHQAKVELEEVLPQE PGEPRVLRGTVRVLNISYHKAVHVRASRDRWQSHRDYPALYIPGGSPDGGLTDRFAFRLEFGDEDEEDEEEGGARLDFVV RYQTEEGVYWANNQGKNYSVVLKGAATTQVLPTRSSKEGESRRLKSCMRPVKI |
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