Gene
| Gene Model ID | habu1_s1467_g05418 |
|---|---|
| Locus | habu1_scaffold1467 : 134132 ... 145565 : - |
| To GenomeBrowser | habu1_scaffold1467:134132..145565 |
| Genes list of scaffold | habu1_scaffold1467 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| caspase- partial | EC:3.4.22.0 GO:0004197 GO:0006508 GO:0006915 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s1467_g05418.t1 | 1 | 1 | Peptidase_C14 | 8 | 234 | 3.8e-28 | 98.8 | 3.0e-32 | 4.4e-28 | 98.6 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s1467_g05418.t1 | gi|591386207|ref|XP_007067525.1| | PREDICTED: caspase-3-like [Chelonia mydas] | 0.0 |
| habu1_s1467_g05418.t1 | gi|530654651|ref|XP_005313463.1| | PREDICTED: caspase-7-like [Chrysemys picta bellii] | 0.0 |
| habu1_s1467_g05418.t1 | gi|327279021|ref|XP_003224257.1| | PREDICTED: caspase-3-like [Anolis carolinensis] | 0.0 |
| habu1_s1467_g05418.t1 | gi|558189891|ref|XP_006129195.1| | PREDICTED: caspase-7-like [Pelodiscus sinensis] | 0.0 |
| habu1_s1467_g05418.t1 | gi|602626305|ref|XP_007420112.1| | PREDICTED: caspase-3-like [Python bivittatus] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 2.8 |
| Venom grand-1 | 0.3 |
| Pit, infrared sensing | 0.0 |
| Nose | 1.5 |
| Brain-1 | 0.0 |
| Eye | 0.0 |
| fetal fibroblast | 0.1 |
| venom gland-2 | 0.0 |
| Brain-2 | 0.0 |
| Spleen | 0.0 |
| Lung | 0.0 |
| Liver | 0.0 |
| Kidney | 0.0 |
| Pancreas | 0.0 |
| Small intestine | 2.9 |
| Large intestine | 8.7 |
| Stomach | 16.3 |
| heart | 0.0 |
| ovary | 0.2 |
| cheek muscle | 0.3 |
Transcript
| Transcript ID | habu1_s1467_g05418.t1 |
|---|---|
| Definition | - |
>habu1_s1467_g05418.t1 gcaactaacaacaacaaagatgtaaaaaggagattcctcagccatggcttgccctagaaggaaccgagctgtaatcattg tcaaccatcagttccttcaagccaaagaaaaacttaaatcaagacggggggccagaagggaagcagacaagttttttaaa gcactttccaactgcaattatgacgtgagattatttctggatttgacagccaaagaaatagaagaagtgtatgaggaaga aagccaggcagaacatgggaaatgttttgtgagcatcctttcaagccacggagaagaaggcagcataatggactgccaag gacaagcagtaaagctaactcgcatttataagatcttatctcctgaaagatgtccatatttggtcggaaagcctaaaatc ttcttcatacaggcgtgccgtggaaatagatttgatgacggcatctacatagaaacagatagcggcgcgccagatgaaga ctgtttttcacattacctgtctattcccgaaaatactactgtcatgttttcttgcagcccaggctatgtttcattcagta atcagtgggaatccatgttcctcaaagcattactggaagtgctaggaggagagaaaaggaaaatggaaatcacccaactg atgacttggattaactggaagattgctttcctttgtgaagcaaaaggaagcgaacacaagggcaaaaaggagatgccctg ctttgtcacaaacatggtggaggagattaaacctttcgaacaagacagggaatgctcggattacctagaccactgcaagc ctacagacagactcaagttgtcagttcataacgtggtttgatttttcacttgctgtatttcgatccagccaactcttaat ttattcaaccagtcatgcttacggaacccatactttattgttgtccgaatgtgtccattcatatcaagctagaagagaaa cgggatggggatacttaaaaaaagaaagggtttaaaaaatgcacactcttacaggaaataaaaatacgagtcataatagc cacg |
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Protein
| Protein ID | habu1_s1467_g05418.t1 |
|---|---|
| Definition | - |
>habu1_s1467_g05418.t1 MACPRRNRAVIIVNHQFLQAKEKLKSRRGARREADKFFKALSNCNYDVRLFLDLTAKEIEEVYEEESQAEHGKCFVSILS SHGEEGSIMDCQGQAVKLTRIYKILSPERCPYLVGKPKIFFIQACRGNRFDDGIYIETDSGAPDEDCFSHYLSIPENTTV MFSCSPGYVSFSNQWESMFLKALLEVLGGEKRKMEITQLMTWINWKIAFLCEAKGSEHKGKKEMPCFVTNMVEEIKPFEQ DRECSDYLDHCKPTDRLKLSVHNVV |
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