Gene
| Gene Model ID | habu1_s1467_g05419 |
|---|---|
| Locus | habu1_scaffold1467 : 146996 ... 163106 : + |
| To GenomeBrowser | habu1_scaffold1467:146996..163106 |
| Genes list of scaffold | habu1_scaffold1467 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| elmo domain-containing protein 3 | GO:0005856 GO:0006909 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s1467_g05419.t2 | 1 | 1 | ELMO_CED12 | 139 | 295 | 1.9e-36 | 125.1 | 4.39999e-40 | 3.3e-36 | 124.3 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 8.0 |
| Venom grand-1 | 5.2 |
| Pit, infrared sensing | 6.2 |
| Nose | 13.2 |
| Brain-1 | 6.8 |
| Eye | 6.5 |
| fetal fibroblast | 8.2 |
| venom gland-2 | 4.7 |
| Brain-2 | 9.0 |
| Spleen | 9.0 |
| Lung | 13.8 |
| Liver | 8.2 |
| Kidney | 10.6 |
| Pancreas | 6.4 |
| Small intestine | 8.0 |
| Large intestine | 9.8 |
| Stomach | 9.2 |
| heart | 15.0 |
| ovary | 48.2 |
| cheek muscle | 25.0 |
Transcript
| Transcript ID | habu1_s1467_g05419.t1 |
|---|---|
| Definition | - |
>habu1_s1467_g05419.t1 agcgggggagggaatgttagcaacagaacccaggttggaggaaaaacggcggagttaaaacccgggttcggtccaactgt tcaggaatgacacctccgtgggggatgaaccaatgcagcataaacaactgccagcgtgaaacacaaacaattacctatcc agtttacaaagctgtgcacatttctgcattgaaacagaatggactgctccagtctctatcagcaacacccaatgatttta aggaatcagatatttcggaggaggttctacgggcccgtgaagaatgggacaacctagcaagcatccatccgggaggcact gtggagaaaccccttggcccggttccctcgatcgctttcaatgaagccctgcagtatttccaaacagcagacctctcgga ctgtaggaaaaagattcggccaaccatccaaagaagaggcctggctgccatggcccatttcctttttggtcctccccgcc ttcagcagcagctgcagagtgagagagacttagctttggctattgcccagtgtggtttggataataatgaaaaagtgcac atgaggatcttgcaaactgtttacaagaaactcactggctcccggtttgattgtgcccgttatggagcccactgggaaga tcttggatttcaaggaatggatcccggcacagatctacgtggagcagggctgctgggactgatgcaaaccctttattttg tgatggattctcggatactacctgtagctagagaaattttcaagctgtcccatcatgaagttcagaattttcctttctgt gtgatgtctatcaatattacccgtattgtcattcaggttttgagggaggaacgcctttccagagagtgcaatcggaggca gcaggtcatcgcagtgctcaatgatttgtacgtggctatatttttacggcttttcaacatctggaaaacacagcaaaaga ccatttccgattccggttttgttttaaaagaattggaagcctttgccaaaaagaacccaaagcagctgctgagacacatg gagacatttatgaacaggagctctgcagcaggaggggatgatagttttcaggctcctgctttcagcttggatgtcctcag tcccaacttaagctctggtcctgttgacaataaggagctggatttcgctagcctagatgacctggcgacccagaaagcac aagacagctgatctggatctagaacggtgtgaaaatccttgtccgggattaatcggcaaagttggttgttttatagccta tttgagggctcggaggagggctgacacgctcctgaaaggctgctgaagtagaaatacaagactttgattgtagggcagag |
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| Transcript ID | habu1_s1467_g05419.t2 |
| Definition | - |
>habu1_s1467_g05419.t2 acggggaggaagcgagcctgggcagctggctggtgtggcgagaagacttaggcttaaggcttagggatgaaccaatgcag cataaacaactgccagcgtgaaacacaaacaattacctatccagtttacaaagctgtgcacatttctgcattgaaacaga atggactgctccagtctctatcagcaacacccaatgattttaaggaatcagatatttcggaggaggttctacgggcccgt gaagaatgggacaacctagcaagcatccatccgggaggcactgtggagaaaccccttggcccggttccctcgatcgcttt caatgaagccctgcagtatttccaaacagcagacctctcggactgtaggaaaaagattcggccaaccatccaaagaagag gcctggctgccatggcccatttcctttttggtcctccccgccttcagcagcagctgcagagtgagagagacttagctttg gctattgcccagtgtggtttggataataatgaaaaagtgcacatgaggatcttgcaaactgtttacaagaaactcactgg ctcccggtttgattgtgcccgttatggagcccactgggaagatcttggatttcaaggaatggatcccggcacagatctac gtggagcagggctgctgggactgatgcaaaccctttattttgtgatggattctcggatactacctgtagctagagaaatt ttcaagctgtcccatcatgaagttcagaattttcctttctgtgtgatgtctatcaatattacccgtattgtcattcaggt tttgagggaggaacgcctttccagagagtgcaatcggaggcagcaggtcatcgcagtgctcaatgatttgtacgtggcta tatttttacggcttttcaacatctggaaaacacagcaaaagaccatttccgattccggttttgttttaaaagaattggaa gcctttgccaaaaagaacccaaagcagctgctgagacacatggagacatttatgaacaggagctctgcagcaggagggga tgatagttttcaggctcctgctttcagcttggatgtcctcagtcccaacttaagctctggtcctgttgacaataaggagc tggatttcgctagcctagatgacctggcgacccagaaagcacaagacagctgatctggatctagaacggtgtgaaaatcc ttgtccgggattaatcggcaaagttggttgttttatagcctatttgagggctcggaggagggctgacacgctcctgaaag gctgctgaagtagaaatacaagactttgattgtagggcagag |
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Protein
| Protein ID | habu1_s1467_g05419.t1 |
|---|---|
| Definition | - |
>habu1_s1467_g05419.t1 MTPPWGMNQCSINNCQRETQTITYPVYKAVHISALKQNGLLQSLSATPNDFKESDISEEVLRAREEWDNLASIHPGGTVE KPLGPVPSIAFNEALQYFQTADLSDCRKKIRPTIQRRGLAAMAHFLFGPPRLQQQLQSERDLALAIAQCGLDNNEKVHMR ILQTVYKKLTGSRFDCARYGAHWEDLGFQGMDPGTDLRGAGLLGLMQTLYFVMDSRILPVAREIFKLSHHEVQNFPFCVM SINITRIVIQVLREERLSRECNRRQQVIAVLNDLYVAIFLRLFNIWKTQQKTISDSGFVLKELEAFAKKNPKQLLRHMET FMNRSSAAGGDDSFQAPAFSLDVLSPNLSSGPVDNKELDFASLDDLATQKAQDS |
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| Protein ID | habu1_s1467_g05419.t2 |
| Definition | - |
>habu1_s1467_g05419.t2 MNQCSINNCQRETQTITYPVYKAVHISALKQNGLLQSLSATPNDFKESDISEEVLRAREEWDNLASIHPGGTVEKPLGPV PSIAFNEALQYFQTADLSDCRKKIRPTIQRRGLAAMAHFLFGPPRLQQQLQSERDLALAIAQCGLDNNEKVHMRILQTVY KKLTGSRFDCARYGAHWEDLGFQGMDPGTDLRGAGLLGLMQTLYFVMDSRILPVAREIFKLSHHEVQNFPFCVMSINITR IVIQVLREERLSRECNRRQQVIAVLNDLYVAIFLRLFNIWKTQQKTISDSGFVLKELEAFAKKNPKQLLRHMETFMNRSS AAGGDDSFQAPAFSLDVLSPNLSSGPVDNKELDFASLDDLATQKAQDS |
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