Gene
| Gene Model ID | habu1_s1467_g05421 |
|---|---|
| Locus | habu1_scaffold1467 : 208181 ... 300487 : - |
| To GenomeBrowser | habu1_scaffold1467:208181..300487 |
| Genes list of scaffold | habu1_scaffold1467 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| homeobox protein pknox2 | GO:0003785 GO:0005634 GO:0005737 GO:0006357 GO:0015629 GO:0015630 GO:0043565 GO:0051015 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s1467_g05421.t1 | 1 | 1 | Homeobox | 269 | 316 | 3.6e-08 | 32.9 | 3.9e-11 | 8.3e-08 | 31.7 |
| habu1_s1467_g05421.t1 | 1 | 1 | Homeobox_KN | 277 | 316 | 2.0e-19 | 69.0 | 2.0e-22 | 4.2e-19 | 67.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s1467_g05421.t1 | gi|602651939|ref|XP_007432349.1| | PREDICTED: homeobox protein PKNOX2 [Python bivittatus] | 0.0 |
| habu1_s1467_g05421.t1 | gi|564244259|ref|XP_006278895.1| | PREDICTED: homeobox protein PKNOX2-like, partial [Alligator mississippiensis] | 0.0 |
| habu1_s1467_g05421.t1 | gi|558158800|ref|XP_006122364.1| | PREDICTED: homeobox protein PKNOX2 isoform X3 [Pelodiscus sinensis] | 0.0 |
| habu1_s1467_g05421.t1 | gi|558158793|ref|XP_006122362.1| | PREDICTED: homeobox protein PKNOX2 isoform X1 [Pelodiscus sinensis] | 0.0 |
| habu1_s1467_g05421.t1 | gi|591384361|ref|XP_007066634.1| | PREDICTED: homeobox protein PKNOX2 [Chelonia mydas] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 0.7 |
| Venom grand-1 | 0.5 |
| Pit, infrared sensing | 1.1 |
| Nose | 1.3 |
| Brain-1 | 3.2 |
| Eye | 1.0 |
| fetal fibroblast | 1.1 |
| venom gland-2 | 0.2 |
| Brain-2 | 2.5 |
| Spleen | 0.6 |
| Lung | 1.1 |
| Liver | 0.1 |
| Kidney | 0.3 |
| Pancreas | 0.1 |
| Small intestine | 0.3 |
| Large intestine | 1.8 |
| Stomach | 0.2 |
| heart | 1.3 |
| ovary | 3.6 |
| cheek muscle | 19.8 |
Transcript
| Transcript ID | habu1_s1467_g05421.t1 |
|---|---|
| Definition | - |
>habu1_s1467_g05421.t1 cctggcctgtgtgtgatgcatcccgctcacaggccacccgtttaacacccctgtcttataggataattgtttttctgata atcatatattctcctggtgtcttccaaaggtgtccccagaatttgcattaaaagcatttttcttacacatcaggaagata ccagaattggaaagtttgccgtataaatttaagaaacatcaatctgctatggaaagatgaattgagtgaatattatgcta atactgtcctctcctctctcctttgttttgtaacaattaaactttcttctatcaataggtcctagatgtgaatcaatccc atgatgcaacatgtctccccagtgccatctctgacaatgatggccacacagactgtaccccctcccccttatcaggaacc ccaacagatgacagccacagcccagcaaccggcaaaagcacagccggtgcacgtcagcacaccctcggcagcagccaatg ctccactacccagcactcctatcgaccctcaggcacagctggaggctgacaagagagctgtctacaggcatcctcttttc cccctcctgacgctgctatttgagaaatgcgagcaagcgacccagggctcggaatgcatcacctctgccagctttgatgt tgacattgagaacttcgtacaccagcaagaacaggagcacaaaccattcttcagtgatgatcctgagctggacaatttga tggtgaaagctattcaggtcctccgaattcatctcttggagttggagaaagtgaacgaattgtgcaaagacttttgtaac cgttacatcacctgcctcaaaactaagatgcacagcgacaaccttctcaggaatgaccttgggggaccttactccccgaa tcagtcctccattaacctacacacacaggatatgttgcaaaattctcccaactccatgacagccatacctggcaaccccc aaggaattgtggtacctgcctcagcactgcagcaagggaatatctccatggcaacagtcaactcacaagttgtgtcaggt ggagccctttaccagcctgtaactatggtaacatctcagggccaggtgctaacccaagcaataccgcaaggggctattca gatccagaacgcacaggttaacctggacctgacctctcttcttgacagcgacgataaaaagtcaaagaacaaacgaggag tccttccgaaacatgctacaaatattatgcgctcctggctttttcagcatcttatgcacccctatccaacagaggatgag aagagacaaatagcagcacagacaaatctcacactgttgcaggtcaacaactggttcatcaatgcccggcgacgtatctt acaacctatgcttgatgctagcaatccagatccagcccccaaagccaagaaaatcaaatcccagcaccggccaacccaga gattctggcccaactccattgcagctggggttctgcagcagcaaggagtcaaccccgggactaaccctgatggctccatc aatatggacaacctccaaactctctcctcagataacgccactattgctatgcagcaagccatgatggcgggtcacgatga ctcactagatgggacagaagaggaggacgaagatgaaatagaagaggaggaggaggaggaagaagaggaggaggaggaac tggaagaggatgctgaggagctccagacaactaatgttagtgaccttggcttggagcagagtgactcactcgagtagtgg attatagcaatggtggaacagtcaccgagtggaaaacggttgaacctgc |
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Protein
| Protein ID | habu1_s1467_g05421.t1 |
|---|---|
| Definition | - |
>habu1_s1467_g05421.t1 MTATAQQPAKAQPVHVSTPSAAANAPLPSTPIDPQAQLEADKRAVYRHPLFPLLTLLFEKCEQATQGSECITSASFDVDI ENFVHQQEQEHKPFFSDDPELDNLMVKAIQVLRIHLLELEKVNELCKDFCNRYITCLKTKMHSDNLLRNDLGGPYSPNQS SINLHTQDMLQNSPNSMTAIPGNPQGIVVPASALQQGNISMATVNSQVVSGGALYQPVTMVTSQGQVLTQAIPQGAIQIQ NAQVNLDLTSLLDSDDKKSKNKRGVLPKHATNIMRSWLFQHLMHPYPTEDEKRQIAAQTNLTLLQVNNWFINARRRILQP MLDASNPDPAPKAKKIKSQHRPTQRFWPNSIAAGVLQQQGVNPGTNPDGSINMDNLQTLSSDNATIAMQQAMMAGHDDSL DGTEEEDEDEIEEEEEEEEEEEEELEEDAEELQTTNVSDLGLEQSDSLE |
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