Protobothrops flavoviridis ver. 1.0

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDhabu1_s1467_g05425
Locus habu1_scaffold1467 : 532086 ... 568517 : -
To GenomeBrowser habu1_scaffold1467:532086..568517
Genes list of scaffold habu1_scaffold1467

Annotation by Blast2GO
Annotation GO
sugar phosphate exchanger 2 GO:0005215 GO:0016021 GO:0055085 GO:0070062

Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
habu1_s1467_g05425.t2 2 1 MFS_1 85 419 8.5e-41 139.8 2.4e-39 1.2e-35 122.9
habu1_s1467_g05425.t2 2 2 MFS_1 431 480 8.5e-41 139.8 7.4e-09 3.6e-05 22.6

Expression profile
Libraries FPKM
>Adult
Venom fang forming tissue 23.4
Venom grand-1 0.5
Pit, infrared sensing 76.3
Nose 2.5
Brain-1 7.1
Eye 1.9
fetal fibroblast 6.8
venom gland-2 1.6
Brain-2 5.0
Spleen 0.4
Lung 0.8
Liver 0.0
Kidney 0.2
Pancreas 0.6
Small intestine 0.1
Large intestine 5.6
Stomach 0.2
heart 0.2
ovary 6.1
cheek muscle 0.2

Transcript
Transcript IDhabu1_s1467_g05425.t1
Definition-
>habu1_s1467_g05425.t1
ggccggccggcggctcttgcttcgccccctccgcttctccctcagcagccatgcgggccatccctgcgccgggcatccgc
ttcctccgctccttctccagggacagctggtaccggggattgattctggtgctaacgttcctgtgctacactacttttca
tctctcacggaagcccattagcattgtaaagagcgaactgcattataactgttcttcacggggatccaggccaaacaatg
cgtccaacagcaccacgtggtgtgactggaagcccttcgatcaggataactacaaggagctatttggagccctggacaat
gctttcttggtggcttatgcaattgggatgtatatcagtgggattttcggtgagcgacttcctctgcgctactacctctc
cggaggcatgttgctcagtggcttatttactgccttatttggactgggctactactggaatatccaccagttatggtact
tcatattggtacagatcctgaacggcttggctcagacaactggatggccttcggtggtgacgtgtgtcggcaactggttt
ggaaaggggaagcgaggtttaatcatgggcatctggaattcacacacgtctgtcggaaatatcttggggtccttgattgc
tggcatctgggtttcaacggcgtggggactgtccttcattgtacctggaatcattatagccttgatgggtgttatctgct
tcctgttcctcattgaatatccagaagatgttgactgcagccctcctcttcaccatgagaccagttcagatgagaaaggt
ctggaggcaggacactccatcagtgacgggagcctgaacgtttctaccaacagccgagaaaacatcattgacgtggcgga
acatgccaaagattctggggaagaccgagaagccatcagcttcgttgatgccctgaagatacctggagtgatcgaatttt
ccttctgccttttgtttgccaaactagtcagctacacctttctctattggctgcctctctacatcgtgaacgttgcccgc
ttaagtgcaaaagaagctggagacatgtcaactctgtttgatgttggcggcattattgggggcatcatggctggtctcat
ctcagactacactggtggcagggccaccacttgctgtgcaatgcttatcctggcagctcccatgctctttttgtacaact
atgttggccaaaatggactaggtacatccatagcaatgctcattatctgtggtgcccttgtcaatggaccctatgctctc
attacaactgctgtttcagctgatttgggtactcatgaaagtctccagggaaacgcaaaagctctctccacagtcacagc
catcattgatggaacaggatctgtgggtgctgctcttgggcctttgttagcaggtttgatctccagctctggttgggaca
atgtcttctacatgttgatttcagccgatgttttggcgtgtctgctcctttcacgagtggtattcaaagaaattcgaggt
tggtgtggatgctatacaagaaaaagagggtcaatcaccattttttgaacagtcatgctctggggccataaatcccgctt
taaagaattttgatacggtctgcattggccataggagcccatcaaggcaagaaggaaggacaatgccaagagtttgctgc
ccccacccacacagctcatgtgggaggaatttatgacgctccaatgtactccagagacaaaactttcctacaaaaggcta
gccgggtcaatcagtggctacacttttggtttttaaaatgattgacggtggaaaacgggggaaaaaatacaagaagagaa
aaaagaatggacgtatttgcgatccaggttgggcccccaaggcctttctttttctatcagttgccagatgcattccattt
tattttttctattattattttttaaactattaaaaacagaaccggtccagggctca
Transcript IDhabu1_s1467_g05425.t2
Definition-
>habu1_s1467_g05425.t2
ggccggccggcggctcttgcttcgccccctccgcttctccctcagcagccatgcgggccatccctgcgccgggcatccgc
ttcctccgctccttctccagggacagctggtaccggggattgattctggtgctaacgttcctgtgctacactacttttca
tctctcacggaagcccattagcattgtaaagagcgaactgcattataactgttcttcacggggatccaggccaaacaatg
cgtccaacagcaccacgtggtgtgactggaagcccttcgatcaggataactacaaggagctatttggagccctggacaat
gctttcttggtggcttatgcaattgggatgtatatcagtgggattttcggtgagcgacttcctctgcgctactacctctc
cggaggcatgttgctcagtggcttatttactgccttatttggactgggctactactggaatatccaccagttatggtact
tcatattggtacagatcctgaacggcttggctcagacaactggatggccttcggtggtgacgtgtgtcggcaactggttt
ggaaaggggaagcgaggtttaatcatgggcatctggaattcacacacgtctgtcggaaatatcttggggtccttgattgc
tggcatctgggtttcaacggcgtggggactgtccttcattgtacctggaatcattatagccttgatgggtgttatctgct
tcctgttcctcattgaatatccagaagatgttgactgcagccctcctcttcaccatgagaccagttcagatgagaaaggt
ctggaggcaggacactccatcagtgacgggagcctgaacgtttctaccaacagccgagaaaacatcattgacgtggcgga
acatgccaaagattctggggaagaccgagaagccatcagcttcgttgatgccctgaagatacctggagtgatcgaatttt
ccttctgccttttgtttgccaaactagtcagctacacctttctctattggctgcctctctacatcgtgaacgttgcccgc
ttaagtgcaaaagaagctggagacatgtcaactctgtttgatgttggcggcattattgggggcatcatggctggtctcat
ctcagactacactggtggcagggccaccacttgctgtgcaatgcttatcctggcagctcccatgctctttttgtacaact
atgttggccaaaatggactaggtacatccatagcaatgctcattatctgtggtgcccttgtcaatggaccctatgctctc
attacaactgctgtttcagctgatttgggtactcatgaaagtctccagggaaacgcaaaagctctctccacagtcacagc
catcattgatggaacaggatctgtgggtgctgctcttgggcctttgttagcaggtttgatctccagctctggttgggaca
atgtcttctacatgttgatttcagccgatgttttggcgtgtctgctcctttcacgagtggtattcaaagaaattcgaggt
tggtgtggatgctatacaagaaaaagaggctttaaagaattttgatacggtctgcattggccataggagcccatcaaggc
aagaaggaaggacaatgccaagagtttgctgcccccacccacacagctcatgtgggaggaatttatgacgctccaatgta
ctccagagacaaaactttcctacaaaaggctagccgggtcaatcagtggctacacttttggtttttaaaatgattgacgg
tggaaaacgggggaaaaaatacaagaagagaaaaaagaatggacgtatttgcgatccaggttgggcccccaaggcctttc
tttttctatcagttgccagatgcattccattttattttttctattattattttttaaactattaaaaacagaaccggtcc
agggctca

Protein
Protein IDhabu1_s1467_g05425.t1
Definition-
>habu1_s1467_g05425.t1
MRAIPAPGIRFLRSFSRDSWYRGLILVLTFLCYTTFHLSRKPISIVKSELHYNCSSRGSRPNNASNSTTWCDWKPFDQDN
YKELFGALDNAFLVAYAIGMYISGIFGERLPLRYYLSGGMLLSGLFTALFGLGYYWNIHQLWYFILVQILNGLAQTTGWP
SVVTCVGNWFGKGKRGLIMGIWNSHTSVGNILGSLIAGIWVSTAWGLSFIVPGIIIALMGVICFLFLIEYPEDVDCSPPL
HHETSSDEKGLEAGHSISDGSLNVSTNSRENIIDVAEHAKDSGEDREAISFVDALKIPGVIEFSFCLLFAKLVSYTFLYW
LPLYIVNVARLSAKEAGDMSTLFDVGGIIGGIMAGLISDYTGGRATTCCAMLILAAPMLFLYNYVGQNGLGTSIAMLIIC
GALVNGPYALITTAVSADLGTHESLQGNAKALSTVTAIIDGTGSVGAALGPLLAGLISSSGWDNVFYMLISADVLACLLL
SRVVFKEIRGWCGCYTRKRGSITIF
Protein IDhabu1_s1467_g05425.t2
Definition-
>habu1_s1467_g05425.t2
MRAIPAPGIRFLRSFSRDSWYRGLILVLTFLCYTTFHLSRKPISIVKSELHYNCSSRGSRPNNASNSTTWCDWKPFDQDN
YKELFGALDNAFLVAYAIGMYISGIFGERLPLRYYLSGGMLLSGLFTALFGLGYYWNIHQLWYFILVQILNGLAQTTGWP
SVVTCVGNWFGKGKRGLIMGIWNSHTSVGNILGSLIAGIWVSTAWGLSFIVPGIIIALMGVICFLFLIEYPEDVDCSPPL
HHETSSDEKGLEAGHSISDGSLNVSTNSRENIIDVAEHAKDSGEDREAISFVDALKIPGVIEFSFCLLFAKLVSYTFLYW
LPLYIVNVARLSAKEAGDMSTLFDVGGIIGGIMAGLISDYTGGRATTCCAMLILAAPMLFLYNYVGQNGLGTSIAMLIIC
GALVNGPYALITTAVSADLGTHESLQGNAKALSTVTAIIDGTGSVGAALGPLLAGLISSSGWDNVFYMLISADVLACLLL
SRVVFKEIRGWCGCYTRKRGFKEF

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Okinawa Institute of Science and Technology
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