Gene
| Gene Model ID | habu1_s1467_g05427 |
|---|---|
| Locus | habu1_scaffold1467 : 596608 ... 618618 : + |
| To GenomeBrowser | habu1_scaffold1467:596608..618618 |
| Genes list of scaffold | habu1_scaffold1467 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s1467_g05427.t1 | 1 | 1 | V-set | 89 | 180 | 2.7e-14 | 53.0 | 4.0e-12 | 8.4e-09 | 35.3 |
| habu1_s1467_g05427.t1 | 2 | 1 | I-set | 93 | 171 | 7.2e-14 | 51.4 | 4.4e-06 | 0.0094 | 15.7 |
| habu1_s1467_g05427.t1 | 1 | 1 | Ig_2 | 199 | 281 | 7.7e-09 | 35.5 | 1.1e-09 | 2.4e-06 | 27.5 |
| habu1_s1467_g05427.t1 | 1 | 1 | Ig_3 | 200 | 267 | 1.3e-11 | 44.8 | 2.8e-12 | 5.9e-09 | 36.3 |
| habu1_s1467_g05427.t1 | 2 | 2 | I-set | 207 | 281 | 7.2e-14 | 51.4 | 1.4e-11 | 2.9e-08 | 33.4 |
| habu1_s1467_g05427.t1 | 1 | 1 | ig | 210 | 265 | 4.4e-09 | 36.3 | 1.2e-09 | 2.6e-06 | 27.4 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s1467_g05427.t1 | gi|602651514|ref|XP_007432139.1| | PREDICTED: LOW QUALITY PROTEIN: hepatocyte cell adhesion molecule [Python bivittatus] | 0.0 |
| habu1_s1467_g05427.t1 | gi|637345476|ref|XP_003226360.2| | PREDICTED: hepatocyte cell adhesion molecule [Anolis carolinensis] | 0.0 |
| habu1_s1467_g05427.t1 | gi|530606106|ref|XP_005294769.1| | PREDICTED: hepatocyte cell adhesion molecule [Chrysemys picta bellii] | 0.0 |
| habu1_s1467_g05427.t1 | gi|591384355|ref|XP_007066631.1| | PREDICTED: hepatocyte cell adhesion molecule [Chelonia mydas] | 0.0 |
| habu1_s1467_g05427.t1 | gi|556961934|ref|XP_005991200.1| | PREDICTED: hepatocyte cell adhesion molecule [Latimeria chalumnae] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 0.1 |
| Venom grand-1 | 0.0 |
| Pit, infrared sensing | 0.2 |
| Nose | 0.4 |
| Brain-1 | 25.8 |
| Eye | 5.2 |
| fetal fibroblast | 0.0 |
| venom gland-2 | 0.3 |
| Brain-2 | 29.9 |
| Spleen | 0.1 |
| Lung | 0.0 |
| Liver | 0.0 |
| Kidney | 0.0 |
| Pancreas | 0.1 |
| Small intestine | 0.0 |
| Large intestine | 0.0 |
| Stomach | 0.0 |
| heart | 0.0 |
| ovary | 0.1 |
| cheek muscle | 0.1 |
Transcript
| Transcript ID | habu1_s1467_g05427.t1 |
|---|---|
| Definition | - |
>habu1_s1467_g05427.t1 gcgagatttggcaccggtaccgcttgacctctgacgccgctgccatggcaaccagtcccccccactcacgtctctttctt cacccccgcttcgctgctctctctctccccaaccgtcgttttaaaacctcgcgccacttccgcttcaaccgcgcgatgac tcctccccgtcttccaccgggcaccaatccaggcggagaagcggcaatgatgtcatacacaccgggtttcgtacatatcg tttgcctttttgtaatctactatgcagagctgatagacggagtcaatatcaccagtccggtattactcattcatggtaca gttggcaagcccgccctgctctctgtgaaatacaccagcacaagccatgacaagcctgtgatcaaatggcaagtgaaacg caacaaggcggtgacggtggtccagtccatcggcacagggatcattgggaacctgcgcccagagtatagagatcggataa gaatcttcgagaacggctctctactgatcaatgagttgcagttatctgatgaagggacctacgaggtggaaatttccatc acagatgacacttttacaggcgagatgaacattaatcttacagtggacgttccagtttcaaggccccacgttgccttggc ctcctcaactgtgctggagctgagtgaatatttctctctcaactgttcccacgcgaatggcactaagcccatctatacat ggatgaaggacaacaggcctcttatcaatgactctcggctgatcctctcccatgatcagaaaactctcaccatcactaga gtcctgatgtccgatgacgacacttacagctgcctggtagagaaccccattagcaaaggacaaagtgttcctgtaaaact gacggtgtacagaaggagctccctctatataatcctgtccaccgggggaattttccttctgggtaccttagtgactgtct gtgcctgctggaaaccatccaagaagaacaaaaagaaactagagaagcaaagttcctcagaatatctggaccagaatgaa gaacacttcaaacatgatgttgaggtcgttcctagaagcagtgaacatgaacgcaagaatccagtggctttgtatatcct gcaggacaaggactctcctgaagctgaagtggaatccgtgcctgactccagagaggctgttcaaccgtcaccacccagtt actccagttctccacctcctcctgcaagatctcctggactacctgtttgggctgcccgtagacatcatcgctcccctgtc aggtctccggtcacttccagaacacagagctcccccaccaggcctcccagctcacctgggcgggccccaaaccccactcg cttggttcggactgctgggcctcatctcatccgagagcagcagggggagcccaacgccatggaaatcaatgcttaaagac agctggcagagtgtatatatgtgcctgtgtatatagagacagctccccttcctgtgactgtttccagaggtagcagtaag tcaactctaagcatttctgcacatgctaatgggttttgcctagtaaacggaagaagtctggaccctgct |
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Protein
| Protein ID | habu1_s1467_g05427.t1 |
|---|---|
| Definition | - |
>habu1_s1467_g05427.t1 MATSPPHSRLFLHPRFAALSLPNRRFKTSRHFRFNRAMTPPRLPPGTNPGGEAAMMSYTPGFVHIVCLFVIYYAELIDGV NITSPVLLIHGTVGKPALLSVKYTSTSHDKPVIKWQVKRNKAVTVVQSIGTGIIGNLRPEYRDRIRIFENGSLLINELQL SDEGTYEVEISITDDTFTGEMNINLTVDVPVSRPHVALASSTVLELSEYFSLNCSHANGTKPIYTWMKDNRPLINDSRLI LSHDQKTLTITRVLMSDDDTYSCLVENPISKGQSVPVKLTVYRRSSLYIILSTGGIFLLGTLVTVCACWKPSKKNKKKLE KQSSSEYLDQNEEHFKHDVEVVPRSSEHERKNPVALYILQDKDSPEAEVESVPDSREAVQPSPPSYSSSPPPPARSPGLP VWAARRHHRSPVRSPVTSRTQSSPTRPPSSPGRAPNPTRLVRTAGPHLIREQQGEPNAMEINA |
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