Gene
| Gene Model ID | habu1_s1467_g05430 |
|---|---|
| Locus | habu1_scaffold1467 : 998866 ... 1103064 : + |
| To GenomeBrowser | habu1_scaffold1467:998866..1103064 |
| Genes list of scaffold | habu1_scaffold1467 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s1467_g05430.t1 | 2 | 1 | V-set | 323 | 415 | 3.6e-33 | 113.8 | 3.3e-11 | 3.5e-08 | 33.3 |
| habu1_s1467_g05430.t1 | 3 | 1 | I-set | 324 | 414 | 1.3e-26 | 92.3 | 3.6e-06 | 0.0038 | 17.0 |
| habu1_s1467_g05430.t1 | 3 | 1 | ig | 342 | 412 | 5.0e-23 | 80.9 | 5.6e-06 | 0.0059 | 16.6 |
| habu1_s1467_g05430.t1 | 3 | 2 | I-set | 447 | 524 | 1.3e-26 | 92.3 | 5.6e-07 | 0.00059 | 19.6 |
| habu1_s1467_g05430.t1 | 3 | 1 | Ig_2 | 447 | 522 | 4.0e-22 | 78.1 | 1.8e-06 | 0.0019 | 18.3 |
| habu1_s1467_g05430.t1 | 2 | 2 | V-set | 716 | 826 | 3.6e-33 | 113.8 | 9.7e-16 | 1.0e-12 | 47.9 |
| habu1_s1467_g05430.t1 | 3 | 2 | Ig_2 | 728 | 819 | 4.0e-22 | 78.1 | 6.0e-06 | 0.0063 | 16.6 |
| habu1_s1467_g05430.t1 | 3 | 2 | ig | 730 | 815 | 5.0e-23 | 80.9 | 1.3e-08 | 1.3e-05 | 25.1 |
| habu1_s1467_g05430.t1 | 3 | 3 | Ig_2 | 845 | 926 | 4.0e-22 | 78.1 | 2.7e-12 | 2.8e-09 | 36.9 |
| habu1_s1467_g05430.t1 | 3 | 3 | I-set | 847 | 926 | 1.3e-26 | 92.3 | 9.7e-13 | 1.0e-09 | 38.0 |
| habu1_s1467_g05430.t1 | 1 | 1 | Ig_3 | 848 | 913 | 8.6e-15 | 54.9 | 2.6e-11 | 2.7e-08 | 34.1 |
| habu1_s1467_g05430.t1 | 3 | 3 | ig | 851 | 911 | 5.0e-23 | 80.9 | 1.8e-08 | 1.9e-05 | 24.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s1467_g05430.t1 | gi|602649400|ref|XP_007431107.1| | PREDICTED: endothelial cell-selective adhesion molecule [Python bivittatus] | 0.0 |
| habu1_s1467_g05430.t1 | gi|637345446|ref|XP_008117293.1| | PREDICTED: endothelial cell-selective adhesion molecule [Anolis carolinensis] | 0.0 |
| habu1_s1467_g05430.t1 | gi|602649372|ref|XP_007431093.1| | PREDICTED: myb/SANT-like DNA-binding domain-containing protein 2 [Python bivittatus] | 0.0 |
| habu1_s1467_g05430.t1 | gi|641770105|ref|XP_008169313.1| | PREDICTED: endothelial cell-selective adhesion molecule isoform X2 [Chrysemys picta bellii] | 0.0 |
| habu1_s1467_g05430.t1 | gi|591383979|ref|XP_007066448.1| | PREDICTED: endothelial cell-selective adhesion molecule [Chelonia mydas] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 2.3 |
| Venom grand-1 | 1.9 |
| Pit, infrared sensing | 2.2 |
| Nose | 0.8 |
| Brain-1 | 1.5 |
| Eye | 1.5 |
| fetal fibroblast | 0.5 |
| venom gland-2 | 0.5 |
| Brain-2 | 1.5 |
| Spleen | 3.6 |
| Lung | 17.2 |
| Liver | 4.2 |
| Kidney | 1.3 |
| Pancreas | 1.4 |
| Small intestine | 1.0 |
| Large intestine | 2.0 |
| Stomach | 15.5 |
| heart | 4.8 |
| ovary | 8.9 |
| cheek muscle | 2.1 |
Transcript
| Transcript ID | habu1_s1467_g05430.t1 |
|---|---|
| Definition | - |
>habu1_s1467_g05430.t1 aggactaaaccggtcgtaagtcgaggactacccaactggtcgtaatttggcttcttactgacaagggaatgatttaagga acagtgaaaatgggtaatatctgattgagcagcttcccaagagacagagtgagttagtaaggatgcaaactatacccttc gcaggtgttacagccgagtgaaggaacatggtgtgggcaaaagaaaaagcagttacacatttgaacagttggagcaggtc tttggtcaaggaggatgggactctcaactctgccaaccggtgctcatcaatagcagtggcttatatcaagagctggagtc tgatggtagcacaatggaggaatattcgcaggacgaatgggggaaccatagtcaggatctttactgttaccaaccaggcg agcaagagttagatgaaatgcctgcagtgaagaaatcactgaagataaaacaggaatcttcagaagattctcagaagtgc gacctaatgcagaatattgtacagatcttggaatccgtccagttaaaatgggaactctttcagagttgggcggacttttc taggctacacctttctaacaaactggctatatttgggattggctataatacacggtggaaggaggatatccgttaccact acgctgagatcagttcccaagttccccttggcaagcgactccgggaatatttcaactcggagaagcccgagggcaggatc atcatgaccagagtccagaaaatgaactggaagaatgtttactacaaattcttagagattactattagcgaagccagatg cctagagttacacatggaaattgactggatacctatcgctcactccaagccaacgggtggaaatattgtccagtatttat tacctggaggcattccaaagagccctggtctgtatgccatcggctacgaagattgtcacgagaagccgccatctcccgat cacgagagcgtcagccaagagccggaaaacgaaactctgggagaaacagaaatgcccttgtcgcaagcttctctcaaagt ggagatggagcccaccagaatcatctattgttacctgggcattgccgagggttgccagaaatatgggtgtattcttcaaa tggtatttcctgtttatgagaatagcttcctgcccagaagttgcaagacatggccaggaaatcggatagaacatctggtg gttggaaggatgcatatccaagcagcttataaggaatttaaaaatatctgcgtctccatgaaaggactgtcttctgctgt cttggaagtggaagttggacaaacgtcagtgacagtgatccaaggacaacaggccatacttcccgtctcatacacgtcca ccagtgtcagcgtaccctttgtcacctggcaccgggaaagacccggggaacgtttgcagatcctggcctttatgtatgac acaacgaaagtggaagaccccgatctcaagcagcgccttggatttttgttccgtatgccttttcacaatgtctcccttgt aattaataataccaaagaaatggattcgggacaatatatgtgcaccgtgaacgttccggacgacagtacggtgaaaggaa gaaacattggacttgttaacctcaccgttctagtcccaccatctccgccaaagtgtcagattcaaggcagcacccaggtt ggaggcaacgttaccatgtcctgcaaatctgcttttggaaaaccagtcccagtttaccattggcaccagactgagccccg cttccaggttttctttgcacccacacaagacacaaagaaggggctcctgacgctgaccaatcttactatcgagatgtctg ggatgtatctctgcaactcctccagcatagctggccattccagctgcacactcagtctggaagtacaaccaccgttcaat acagcggtggtggctggtgcagtcgtgggaaccctcattggacttggcctgatcatattttttacacttcagatgtttat ctacaaaaagaaaaagaaggaagcccaagaggatgtagccaatgaaatcaaggaagatgctgtagctcccaagacgctct cctgggtgaaaaattcctgcactgatggactctccaaaaatggaacactgtcatccatgaacacaacccgggatcagaaa ttatatccagtccaccccccctcggacactgcctccatcaccactgctgcaggaagcatggtgggcttcaagggcccttt cagcgaccccagaaatgggactctcacgccgacgcccagcctttccagccaatcgctgcccctctattttccaccagtga ttaacggggtccagtgccatcatgccaatgtgcccatccacaggaataacctccaccggacaaacagggctcagccacag gccccccagcagcaggagccccctgtccccactactcaagggctaacggcctccactctgaatcactatgggggctgtgt ggaggtgactgtgccacatgatcccgtgatgcagcagaaaggttcaaacgtgaaaattccttgtcattataaaacatcgg ttggcaaaaactttgttttggaatggaggtttgctggtggctcaacggctcctgatgctggaacacagattctgtatttt gcaaataatgagctgtacaaaccaggtgggcaggctgaccggctcagcctccttcacaatcctcccacgttgggagatgc ttccatccagttgaacaacctccgtccatcggatgctggcacttacatctgcgaagtaaacaacccccctgatttctatg gcactggtaccgggcttgtgaaacttgtagttttaatgccaccatccacaccagtctgtaaagggtccacctctgcgcct attggatcagatgtcagcttctcctgcagttcttctgaaggtgtgccctccccaatttattcttggactctgctggattc taaacagccacttcctacctccaacatggtgcaaaaccaagaaaagggaactctcctattgaccaacctcacacttcagt tttctggtacctacagctgcactgctaccaatgagtttggacaccatagttgccaaatctctctccatgtgacaggtatt tcaaaagctggggccgttgcaggagctcttattggggccatcttagccctattcctgcttggagccattgtcctctacgt cttgcagcacaggagaaaaaagatggctaaggagaagcctcagtctgaatacagtggaaatgaaataagggaggacgcca ctgctcctggaatcttcagccccaaagagagaagggacagtaaatcagaaagccaactcctggaaaatgtctcttctaga cctgggtcagccagtacaaccaaatcccaactaaagaacttcatagtctgaatttgcatcgctattttttcccttaaaag gccagctttgttttactgcagtgaaagtaggattcatctgaaaaactcatcccatccatgttgcttggccttcatctacc actcctaatccttttgctgcgttggtatctgttaagttactttcctgcagtcccattagccaatgcaagaatgcttctaa attaccttatcatctgtctcaaattctattgaccagtcgtgaaaataaacctaaaagtccgaaccacatct |
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Protein
| Protein ID | habu1_s1467_g05430.t1 |
|---|---|
| Definition | - |
>habu1_s1467_g05430.t1 MEEYSQDEWGNHSQDLYCYQPGEQELDEMPAVKKSLKIKQESSEDSQKCDLMQNIVQILESVQLKWELFQSWADFSRLHL SNKLAIFGIGYNTRWKEDIRYHYAEISSQVPLGKRLREYFNSEKPEGRIIMTRVQKMNWKNVYYKFLEITISEARCLELH MEIDWIPIAHSKPTGGNIVQYLLPGGIPKSPGLYAIGYEDCHEKPPSPDHESVSQEPENETLGETEMPLSQASLKVEMEP TRIIYCYLGIAEGCQKYGCILQMVFPVYENSFLPRSCKTWPGNRIEHLVVGRMHIQAAYKEFKNICVSMKGLSSAVLEVE VGQTSVTVIQGQQAILPVSYTSTSVSVPFVTWHRERPGERLQILAFMYDTTKVEDPDLKQRLGFLFRMPFHNVSLVINNT KEMDSGQYMCTVNVPDDSTVKGRNIGLVNLTVLVPPSPPKCQIQGSTQVGGNVTMSCKSAFGKPVPVYHWHQTEPRFQVF FAPTQDTKKGLLTLTNLTIEMSGMYLCNSSSIAGHSSCTLSLEVQPPFNTAVVAGAVVGTLIGLGLIIFFTLQMFIYKKK KKEAQEDVANEIKEDAVAPKTLSWVKNSCTDGLSKNGTLSSMNTTRDQKLYPVHPPSDTASITTAAGSMVGFKGPFSDPR NGTLTPTPSLSSQSLPLYFPPVINGVQCHHANVPIHRNNLHRTNRAQPQAPQQQEPPVPTTQGLTASTLNHYGGCVEVTV PHDPVMQQKGSNVKIPCHYKTSVGKNFVLEWRFAGGSTAPDAGTQILYFANNELYKPGGQADRLSLLHNPPTLGDASIQL NNLRPSDAGTYICEVNNPPDFYGTGTGLVKLVVLMPPSTPVCKGSTSAPIGSDVSFSCSSSEGVPSPIYSWTLLDSKQPL PTSNMVQNQEKGTLLLTNLTLQFSGTYSCTATNEFGHHSCQISLHVTGISKAGAVAGALIGAILALFLLGAIVLYVLQHR RKKMAKEKPQSEYSGNEIREDATAPGIFSPKERRDSKSESQLLENVSSRPGSASTTKSQLKNFIV |
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