Protobothrops flavoviridis ver. 1.0

OIST Marine Genomics Unit since 2008

Gene
Gene Model IDhabu1_s1467_g05432
Locus habu1_scaffold1467 : 1145183 ... 1156153 : +
To GenomeBrowser habu1_scaffold1467:1145183..1156153
Genes list of scaffold habu1_scaffold1467

Annotation by Blast2GO
Annotation GO
sialate o-acetylesterase isoform x1 GO:0044421

Hmmer Search for Pfam
query Total ID Target From To Eval Score cEval iEval Score
habu1_s1467_g05432.t1 1 1 DUF303 82 358 0.0 223.6 0.0 0.0 223.1

Blast Hit to nr / sp
query Subject ID Subject Name evalue
habu1_s1467_g05432.t1 gi|602649380|ref|XP_007431097.1| PREDICTED: sialate O-acetylesterase isoform X1 [Python bivittatus] 0.0
habu1_s1467_g05432.t1 gi|637340731|ref|XP_008116435.1| PREDICTED: sialate O-acetylesterase isoform X3 [Anolis carolinensis] 0.0
habu1_s1467_g05432.t1 gi|637340734|ref|XP_008116436.1| PREDICTED: sialate O-acetylesterase isoform X4 [Anolis carolinensis] 0.0
habu1_s1467_g05432.t1 gi|637340726|ref|XP_008116434.1| PREDICTED: sialate O-acetylesterase isoform X1 [Anolis carolinensis] 0.0
habu1_s1467_g05432.t1 gi|327282064|ref|XP_003225764.1| PREDICTED: sialate O-acetylesterase isoform X2 [Anolis carolinensis] 0.0

Expression profile
Libraries FPKM
>Adult
Venom fang forming tissue 10.8
Venom grand-1 12.5
Pit, infrared sensing 14.7
Nose 11.3
Brain-1 4.6
Eye 15.0
fetal fibroblast 14.7
venom gland-2 18.9
Brain-2 5.6
Spleen 28.5
Lung 21.5
Liver 61.4
Kidney 37.7
Pancreas 66.1
Small intestine 21.8
Large intestine 15.4
Stomach 25.2
heart 19.0
ovary 23.5
cheek muscle 37.7

Transcript
Transcript IDhabu1_s1467_g05432.t1
Definition-
>habu1_s1467_g05432.t1
cagtcctacgttacttcaaggcttggatcagcccagtgtgaggtcacaaggagattggtgtctttaagatacagactctg
gacattctctgctcccagaattgtatgcgctgactttctgacttcatgatatcaaaaaggacgatggaggcttctttgcc
attcatgttgctcttggcttatacagcaggtgctaagtttcactttgcttcctattatgctgatcacatggtgctccaga
aggaaccatctcatgcaatcatatggggctttggagatcctggttccaaggtgacgctgacagtctcccagaatcacagt
gttgtgaccaaaatggtacagatggaagaaaactgtgacacttggaaaattatgctggatcccgtggctcaaggaggtcc
ttatactatagaggtacaccagtacatcaaggaagaagtgtccaatatatcactaaaagatatctactttggagatgtct
ggatttgcagtggacagagtaacatggagatgaccgtttcacagatattcaatgctagcaaggagatggaagatgcatcc
aagtatccccttgtgcggatattttccactgcccttgttcagtcagaagtggaactgcaagaccttggaggcgtcaactt
gcagtggtccattccaacagccagaaacctgggtcacggagacttcagctacttttctgcagtatgttggctgtttggtc
agtatttatttgagaaactcaagtaccccatagggttgatagataccacctggggagggactccagttgaggcctggtcc
tccaagaaggccttgaatgaatgtgggctgttacagtatattgaaagaagtcctcctttgtaccttgatgctggtccccg
agaagtatcagtgctttggaacgcaatgattcgccctctcatcaacatgaccatccaaggagttatatggtatcaagggg
aagccaacactcttatgaacaccgatctgtacaattgcacatttcctgcactcatcgacgattggcgaaaagcctttcat
gaaggatctgatggccaaaccaacaagcagtttccctttggctttgttcagttatgtacagctgtccaagtgcagacaaa
cgacaaatttccacgtattcggtggcatcagactgcagactatggctatgtccctaataagagaatgcccaatactttca
tggctgttaccatagatcttggtgataatgaatctccttatggcagcatccacccccgggataagcggactgtggcttac
cggttgcatcttggagcactgtcagtagcttatggggagaaaagtataatcttccagggtccctatcctcagagagtgca
agtgaatgaaacccacaggcttcttaatatcacctttgaagaatgtgttcagttgcgtcacatggacaacaagacctttg
aggtgtgttgttctaatcagggaacatgcaattggaaacaggcatccattgtgtcatcctcttcctactcggtaattctg
cagagcccaacctgttcagatggcataaagggcttgcgctacgcctggtctgaatggccttgtgaatacaaacagtgtcc
catttacaatctacaggaattgcccgcccctcccttcattacattttcccacaataatcctgcatggatttttctaacta
cggtacattatgttgtactaccacttgcagcaactaattctcacagcaagtaaaaccctttcaaacatgaaatgttacat
taaaagcacaatatcactttacaaaa

Protein
Protein IDhabu1_s1467_g05432.t1
Definition-
>habu1_s1467_g05432.t1
MVLQKEPSHAIIWGFGDPGSKVTLTVSQNHSVVTKMVQMEENCDTWKIMLDPVAQGGPYTIEVHQYIKEEVSNISLKDIY
FGDVWICSGQSNMEMTVSQIFNASKEMEDASKYPLVRIFSTALVQSEVELQDLGGVNLQWSIPTARNLGHGDFSYFSAVC
WLFGQYLFEKLKYPIGLIDTTWGGTPVEAWSSKKALNECGLLQYIERSPPLYLDAGPREVSVLWNAMIRPLINMTIQGVI
WYQGEANTLMNTDLYNCTFPALIDDWRKAFHEGSDGQTNKQFPFGFVQLCTAVQVQTNDKFPRIRWHQTADYGYVPNKRM
PNTFMAVTIDLGDNESPYGSIHPRDKRTVAYRLHLGALSVAYGEKSIIFQGPYPQRVQVNETHRLLNITFEECVQLRHMD
NKTFEVCCSNQGTCNWKQASIVSSSSYSVILQSPTCSDGIKGLRYAWSEWPCEYKQCPIYNLQELPAPPFITFSHNNPAW
IFLTTVHYVVLPLAATNSHSK

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