Gene
| Gene Model ID | habu1_s1467_g05435 |
|---|---|
| Locus | habu1_scaffold1467 : 1179443 ... 1181097 : + |
| To GenomeBrowser | habu1_scaffold1467:1179443..1181097 |
| Genes list of scaffold | habu1_scaffold1467 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| hydrolethalus syndrome protein 1 | GO:0044424 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s1467_g05435.t1 | 1 | 1 | HYLS1_C | 205 | 293 | 4.9e-32 | 110.0 | 7.0e-36 | 1.0e-31 | 108.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s1467_g05435.t1 | gi|602649390|ref|XP_007431102.1| | PREDICTED: hydrolethalus syndrome protein 1 homolog isoform X1 [Python bivittatus] | 0.0 |
| habu1_s1467_g05435.t1 | gi|327282046|ref|XP_003225755.1| | PREDICTED: hydrolethalus syndrome protein 1 [Anolis carolinensis] | 0.0 |
| habu1_s1467_g05435.t1 | gi|558158849|ref|XP_006122375.1| | PREDICTED: hydrolethalus syndrome protein 1 isoform X1 [Pelodiscus sinensis] | 0.0 |
| habu1_s1467_g05435.t1 | gi|591383947|ref|XP_007066432.1| | PREDICTED: hydrolethalus syndrome protein 1 [Chelonia mydas] | 0.0 |
| habu1_s1467_g05435.t1 | gi|641770093|ref|XP_008169308.1| | PREDICTED: hydrolethalus syndrome protein 1 [Chrysemys picta bellii] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 4.2 |
| Venom grand-1 | 4.6 |
| Pit, infrared sensing | 4.2 |
| Nose | 5.1 |
| Brain-1 | 1.7 |
| Eye | 3.2 |
| fetal fibroblast | 7.5 |
| venom gland-2 | 3.7 |
| Brain-2 | 0.9 |
| Spleen | 2.4 |
| Lung | 2.1 |
| Liver | 3.0 |
| Kidney | 1.9 |
| Pancreas | 4.3 |
| Small intestine | 2.3 |
| Large intestine | 2.1 |
| Stomach | 2.8 |
| heart | 1.0 |
| ovary | 64.2 |
| cheek muscle | 1.1 |
Transcript
| Transcript ID | habu1_s1467_g05435.t1 |
|---|---|
| Definition | - |
>habu1_s1467_g05435.t1 ccttgctccctagaataatcgcaggcacttatcaagctgttggagagttactacactccctcaaatcatctccaggagag gaagggattgggtgaatatgcctttgcctgaaaaagttgggatgtgcactagaactgctaactaccccgactgagagaag caatgcaagccctgatacgacccaaccgataccgatggaactctatgagcagggaagaacggctcaaagccgctgccatg gactttattcgcatgtgtgcagaacagggtgatggtgatagcccgaggcagcttcaagcggcccctcagctggaccccta cccgagagcctcggtggcctcagtggccagaccgatgcttcccacagtgatcaggcaaggtcagacagaagccagcttcc agtcagacgaccccgagaattccagagtttctaagaaacctgtgatgaaaaggaaagttctgaggcgaacgcctgacgga gaggtgcaagtgacagatgaatccctcactagtgagacagaatccaataatccaagtgtccaacaatccagtcctgaatg tgagaacttaaatcagagaatgtaccttctgaatgctcaggaagaggaggaagagtgtgtggaggggaaccagccccaaa gttcccctgggtcagtctactcctggagcccctcggaggaaagccggcatcagtgttcccggaaagagagccagagcctc agctcttcatcctttgagcaggacttcatcctaactgcccaccccaagtccttcatcttgccaaagttggagcagctcaa tcggaacagaacgaagaccgatcgggttgcccgttacctggaacacaagcacaactgggaatccctgcggcttccgggag aagatcccaggaaaggtgtgcgctggagcattcgggaacagatgctctacaagtcagaactgcctcctaaggctcagcct gtttatatccccaacaattacctggtgcctacagagaagaagagatctgccctgcgctggggaatacgctgtgacttagc aaacggcgtggtgcctagaaacgtctattcctcctaagaacctggaatctttaaaaggtcacacacagaagaacttagtc gatcccaaagagctaagctaatgcagctaggctatttttatttctttccaattccaaaccctaactcgtttactcttaaa atgtattttggatctgaatggctactttctggcaaaagattttttaaaacctatcgttgtttccgatcatattatttgaa tgtaaatattaccttataaaaaggcaggcagaagatgaatcaaaacctactgaaatacagtcaagaaaaaggatccttgt ttggtttttttcccccccccaagatacttcacacacattccctctttgaactcctgtacttttaaaaagttttaacttct ggatgtatagattaaattaaatgtatgaagtgaaatga |
|
Protein
| Protein ID | habu1_s1467_g05435.t1 |
|---|---|
| Definition | - |
>habu1_s1467_g05435.t1 MQALIRPNRYRWNSMSREERLKAAAMDFIRMCAEQGDGDSPRQLQAAPQLDPYPRASVASVARPMLPTVIRQGQTEASFQ SDDPENSRVSKKPVMKRKVLRRTPDGEVQVTDESLTSETESNNPSVQQSSPECENLNQRMYLLNAQEEEEECVEGNQPQS SPGSVYSWSPSEESRHQCSRKESQSLSSSSFEQDFILTAHPKSFILPKLEQLNRNRTKTDRVARYLEHKHNWESLRLPGE DPRKGVRWSIREQMLYKSELPPKAQPVYIPNNYLVPTEKKRSALRWGIRCDLANGVVPRNVYSS |
|