Gene
| Gene Model ID | habu1_s1467_g05437 |
|---|---|
| Locus | habu1_scaffold1467 : 1210263 ... 1243143 : + |
| To GenomeBrowser | habu1_scaffold1467:1210263..1243143 |
| Genes list of scaffold | habu1_scaffold1467 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s1467_g05437.t1 | 1 | 1 | Ig_3 | 77 | 147 | 8.9e-07 | 29.3 | 2.3e-08 | 6.8e-05 | 23.3 |
| habu1_s1467_g05437.t1 | 1 | 1 | Ig_2 | 93 | 159 | 1.1e-13 | 51.1 | 6.0e-13 | 1.8e-09 | 37.5 |
| habu1_s1467_g05437.t1 | 1 | 1 | fn3 | 168 | 260 | 1.3e-07 | 31.6 | 9.3e-11 | 2.8e-07 | 30.5 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s1467_g05437.t1 | gi|637340775|ref|XP_008116444.1| | PREDICTED: carcinoembryonic antigen-related cell adhesion molecule 5-like [Anolis carolinensis] | 0.0 |
| habu1_s1467_g05437.t1 | gi|637340889|ref|XP_008116462.1| | PREDICTED: receptor-type tyrosine-protein phosphatase F-like [Anolis carolinensis] | 0.0 |
| habu1_s1467_g05437.t1 | gi|564233821|ref|XP_006261272.1| | PREDICTED: carcinoembryonic antigen-related cell adhesion molecule 5-like [Alligator mississippiensis] | 0.0 |
| habu1_s1467_g05437.t1 | gi|557322610|ref|XP_006034393.1| | PREDICTED: titin-like [Alligator sinensis] | 0.0 |
| habu1_s1467_g05437.t1 | gi|641770128|ref|XP_008169322.1| | PREDICTED: carcinoembryonic antigen-related cell adhesion molecule 5 [Chrysemys picta bellii] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 0.1 |
| Venom grand-1 | 0.0 |
| Pit, infrared sensing | 0.1 |
| Nose | 0.0 |
| Brain-1 | 0.0 |
| Eye | 0.0 |
| fetal fibroblast | 0.0 |
| venom gland-2 | 0.1 |
| Brain-2 | 0.0 |
| Spleen | 0.0 |
| Lung | 0.0 |
| Liver | 0.0 |
| Kidney | 0.0 |
| Pancreas | 0.0 |
| Small intestine | 0.0 |
| Large intestine | 0.0 |
| Stomach | 0.0 |
| heart | 0.0 |
| ovary | 0.0 |
| cheek muscle | 0.0 |
Transcript
| Transcript ID | habu1_s1467_g05437.t1 |
|---|---|
| Definition | - |
>habu1_s1467_g05437.t1 gaccgggggttggggacccctgttataaagtgtacaagtgctatcggctatgcaatttcagcctccctatatagtctcca cttccaaggaatggtttggggctacaaagaaagtccttgctatatatctggcctgattgatactgctatgcagtgtttct caaccttgacaattttaaggcatgtggacttcaactcccagaattccacagccagcaatgctggctgtggaattctggga gttgaagtccacatgccttaatattgtcaagcactacactaaccgagatggcatggtggttcttgccgaagcagtgacgc ctctcttaaacttgacctcagcaaaccggacatacatgggttggtacacttgcacagctcacaatgaggtcaacagccaa accagcaatgggatgtaccttgacgttatctatggtccagatgagccggtgatcagcatagagccatttgcaattaacca acatggcttctcagccaatgaacaagaagaagtgatcatgacatgtctagctccttccaatcctcccagccactacattt ggttctacaacagctctcaagtctactccggacagaagtatgtgattgccagaatctcacggactcaaacaggcatctat acttgcttagcccagaatatgcatctgaatactcggacccagacaactattatcttgactgtctattaataccccaaccc acccaatgtgacaatcagcagactgatgtacactcgcccccgtacagaggtggaactggaatgggaaactcgaggctcag gaaacctgactggctttgtagtccagaggagagaagcaaaaaagaccggcccaaagcagatgaccagcagctgggaaaca gtagccaacaacattgaccctgatgtccgtggccgaaagttgggtggtctggatcccgcagtggtgtatgcttttcggat ccttgctgttaaccatcgtaccactgggtatccctctgaaatgaagaccccagctgaccctcctttcaatgcatatcctg tggtgatcggtgctgctatagcaggaatgattgtggccacagtcatctccctcctagtttttcaatacatcattcggaac cgggagaataatccaaatacgccattggcccccaaacctttttgtcgatagactcagtcccacgctcagctacaaatttc ccagaggcaattcaagaggaagctgtggtgacctcagaggatccatcaagggcccaggaaggtgtgccagcccccagtcc tcctccccaggatccagttaatgttacaatcacagtgacagccaccccatgactaccaggaaatctgaatccttagcagt caaggtaggataggttgattaaagatctccttgatcagcaaaaga |
|
Protein
| Protein ID | habu1_s1467_g05437.t1 |
|---|---|
| Definition | - |
>habu1_s1467_g05437.t1 MLAVEFWELKSTCLNIVKHYTNRDGMVVLAEAVTPLLNLTSANRTYMGWYTCTAHNEVNSQTSNGMYLDVIYGPDEPVIS IEPFAINQHGFSANEQEEVIMTCLAPSNPPSHYIWFYNSSQVYSGQKYVIARISRTQTGIYTCLAQNMHLNTRTQTTIIL TVYXYPNPPNVTISRLMYTRPRTEVELEWETRGSGNLTGFVVQRREAKKTGPKQMTSSWETVANNIDPDVRGRKLGGLDP AVVYAFRILAVNHRTTGYPSEMKTPADPPFNAYPVVIGAAIAGMIVATVISLLVFQYIIRNRENNPNTPLAPKPFCR |
|