Gene
| Gene Model ID | habu1_s1467_g05440 |
|---|---|
| Locus | habu1_scaffold1467 : 1435161 ... 1491032 : - |
| To GenomeBrowser | habu1_scaffold1467:1435161..1491032 |
| Genes list of scaffold | habu1_scaffold1467 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| nucleoplasmin-like isoform x1 | GO:0000003 GO:0006996 GO:0043229 GO:0044763 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s1467_g05440.t2 | 1 | 1 | Nucleoplasmin | 142 | 281 | 1.80067e-42 | 144.3 | 0.0 | 2.79979e-42 | 143.7 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 0.0 |
| Venom grand-1 | 0.0 |
| Pit, infrared sensing | 0.0 |
| Nose | 0.0 |
| Brain-1 | 0.0 |
| Eye | 0.0 |
| fetal fibroblast | 0.0 |
| venom gland-2 | 0.0 |
| Brain-2 | 0.0 |
| Spleen | 0.0 |
| Lung | 0.0 |
| Liver | 0.1 |
| Kidney | 0.0 |
| Pancreas | 0.0 |
| Small intestine | 0.0 |
| Large intestine | 0.0 |
| Stomach | 0.4 |
| heart | 0.1 |
| ovary | 42.7 |
| cheek muscle | 0.5 |
Transcript
| Transcript ID | habu1_s1467_g05440.t1 |
|---|---|
| Definition | - |
>habu1_s1467_g05440.t1 gcatatgcctgtcactatgttccaggaatgggagaatgtcgtcctttacacttaatccttgtttcaaatcaggtcattag ggactttctggaatcttcttctgcagtattagaacctgactagagattcagaaggaaaagaactgaatattgtagaaaga gttctttaaatgacccatctgggacaccttgtgttttgaaagagcaaccacagatgatgaatacatttttaatctatggg ccatggatggtctttcatctatactcaggccactttcaaaggggatttgctctccgaaaaatgaattatgctgggcagga gaagaagcaggttgctacacactgaaactctacctttcaaaaactgtgatcagtgctgaagctgggtgcatgcaagaatg tcgcagttacagaacctacggtcaatgtgcttcaggtacaatatgttgggctatctaccaaagttactggaacctacaga ttaaggacgtctgttcaaagcagggtttggtggttcattctgagacttggagaatctttcttgaagcaatggccttggaa gccagctctgctaccaatgagagtttttgctcagaaaagcctgtttgtgtaatctggggatgtcagctcaacagggaaaa cccagtctatacatttgaaactccagaagagtggtcctgtgagcagcagttagctctaagaacaatctgccttggggaaa acgccaaggatgaattcaatgtggtagagatcttgccgccaaagagtagcacaaattctactccagtgcgcattgcaacc ttgaaactttctgtacttccaatggctactctagcagggcttgatttgactcctcccatcacatttaggctaaaatcagg atctggacccatataccttgctggacaacatgtaacagttggcttgcaatggaatggagatgatcaggagaaagaatcgt cttcttcatcacagcaaagtgatgagacggaaagctcttccacggaagactcacctgtaaaacctgtgagacccaggaag cgtgggtcttccaccaagaaggaacaagaggtgccttttcaggaacccactttggtaaagaaacaattagattttaatgc acaagtagttgccatccttctctgctctgccttggcagctgaagctcttacctgcaacaagtgcagacgatttaagttgg gatttggttgtgtcactaagaaaccatcattaccttgtactgctaaaccaaatcaaaagtgtaaaattgtcaaatctttt ctagaaggaacagtcagagcagctgaagctcttacctgcatcaagtgcaaaaattataaactggctatttcaagatgtat caataagaaaccatcaaaaatgtgtattgccaaaccgggtcaaccatgtcaaattgtcaaatattttgaagaagctgaag ctcttacctgcaagaggtgcaaaaagtttaagatgggatctgcttgtaagaagccatcaaaaacctgtattgcgaaacca ggtcaaaagtgtaaaattacttattttaatgttggtggcctcacatgcgttaaatgttaccgtgagtatatgaatggcac atgtcaaatgaaaactcaacactgccaagcaggatccggagagagttgtttccggcagaagctcattgtagaacgtgctt tcctttatactaggaccggctgtgccccggattgcaagaatgtggacggaggagtatacatccgccatatcaacaaatgt tgcgtacagaacttatgcaaccaatcctaggctgggaatacgtttggacacaaagctgcaagcacagcactttaacactc tgttaaatgtttgataatgataataataataataataataataataataataataataataataataataataaataaaa aacttccagtgttggag |
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| Transcript ID | habu1_s1467_g05440.t2 |
| Definition | - |
>habu1_s1467_g05440.t2 gcatatgcctgtcactatgttccaggaatgggagaatgtcgtcctttacacttaatccttgtttcaaatcaggtcattag ggactttctggaatcttcttctgcagtattagaacctgactagagattcagaaggaaaagaactgaatattgtagaaaga gttctttaaatgacccatctgggacaccttgtgttttgaaagagcaaccacagatgatgaatacatttttaatctatggg ccatggatggtctttcatctatactcagcaaatgctatttggtgtttccactgtctcaggccactttcaaaggggatttg ctctccgaaaaatgaattatgctgggcaggagaagaagcaggttgctacacactgaaactctacctttcaaaaactgtga tcagtgctgaagctgggtgcatgcaagaatgtcgcagttacagaacctacggtcaatgtgcttcaggtacaatatgttgg gctatctaccaaagttactggaacctacagattaaggacgtctgttcaaagcagggtttggtggttcattctgagacttg gagaatctttcttgaagcaatggccttggaagccagctctgctaccaatgagagtttttgctcagaaaagcctgtttgtg taatctggggatgtcagctcaacagggaaaacccagtctatacatttgaaactccagaagagtggtcctgtgagcagcag ttagctctaagaacaatctgccttggggaaaacgccaaggatgaattcaatgtggtagagatcttgccgccaaagagtag cacaaattctactccagtgcgcattgcaaccttgaaactttctgtacttccaatggctactctagcagggcttgatttga ctcctcccatcacatttaggctaaaatcaggatctggacccatataccttgctggacaacatgtaacagttggcttgcaa tggaatggagatgatcaggagaaagaatcgtcttcttcatcacagcaaagtgatgagacggaaagctcttccacggaaga ctcacctgtaaaacctgtgagacccaggaagcgtgggtcttccaccaagaaggaacaagaggtgccttttcaggaaccca ctttggtaaagaaacaattagattttaatgcacaagtagttgccatccttctctgctctgccttggcagctgaagctctt acctgcaacaagtgcagacgatttaagttgggatttggttgtgtcactaagaaaccatcattaccttgtactgctaaacc aaatcaaaagtgtaaaattgtcaaatcttttctagaaggaacagtcagagcagctgaagctcttacctgcatcaagtgca aaaattataaactggctatttcaagatgtatcaataagaaaccatcaaaaatgtgtattgccaaaccgggtcaaccatgt caaattgtcaaatattttgaagaagctgaagctcttacctgcaagaggtgcaaaaagtttaagatgggatctgcttgtaa gaagccatcaaaaacctgtattgcgaaaccaggtcaaaagtgtaaaattacttattttaatgttggtggcctcacatgcg ttaaatgttaccgtgagtatatgaatggcacatgtcaaatgaaaactcaacactgccaagcaggatccggagagagttgt ttccggcagaagctcattgtagaacgtgctttcctttatactaggaccggctgtgccccggattgcaagaatgtggacgg aggagtatacatccgccatatcaacaaatgttgcgtacagaacttatgcaaccaatcctaggctgggaatacgtttggac acaaagctgcaagcacagcactttaacactctgttaaatgtttgataatgataataataataataataataataataata ataataataataataataataataaataaaaaacttccagtgttggag |
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Protein
| Protein ID | habu1_s1467_g05440.t1 |
|---|---|
| Definition | - |
>habu1_s1467_g05440.t1 MDGLSSILRPLSKGICSPKNELCWAGEEAGCYTLKLYLSKTVISAEAGCMQECRSYRTYGQCASGTICWAIYQSYWNLQI KDVCSKQGLVVHSETWRIFLEAMALEASSATNESFCSEKPVCVIWGCQLNRENPVYTFETPEEWSCEQQLALRTICLGEN AKDEFNVVEILPPKSSTNSTPVRIATLKLSVLPMATLAGLDLTPPITFRLKSGSGPIYLAGQHVTVGLQWNGDDQEKESS SSSQQSDETESSSTEDSPVKPVRPRKRGSSTKKEQEVPFQEPTLVKKQLDFNAQVVAILLCSALAAEALTCNKCRRFKLG FGCVTKKPSLPCTAKPNQKCKIVKSFLEGTVRAAEALTCIKCKNYKLAISRCINKKPSKMCIAKPGQPCQIVKYFEEAEA LTCKRCKKFKMGSACKKPSKTCIAKPGQKCKITYFNVGGLTCVKCYREYMNGTCQMKTQHCQAGSGESCFRQKLIVERAF LYTRTGCAPDCKNVDGGVYIRHINKCCVQNLCNQS |
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| Protein ID | habu1_s1467_g05440.t2 |
| Definition | - |
>habu1_s1467_g05440.t2 MMNTFLIYGPWMVFHLYSANAIWCFHCLRPLSKGICSPKNELCWAGEEAGCYTLKLYLSKTVISAEAGCMQECRSYRTYG QCASGTICWAIYQSYWNLQIKDVCSKQGLVVHSETWRIFLEAMALEASSATNESFCSEKPVCVIWGCQLNRENPVYTFET PEEWSCEQQLALRTICLGENAKDEFNVVEILPPKSSTNSTPVRIATLKLSVLPMATLAGLDLTPPITFRLKSGSGPIYLA GQHVTVGLQWNGDDQEKESSSSSQQSDETESSSTEDSPVKPVRPRKRGSSTKKEQEVPFQEPTLVKKQLDFNAQVVAILL CSALAAEALTCNKCRRFKLGFGCVTKKPSLPCTAKPNQKCKIVKSFLEGTVRAAEALTCIKCKNYKLAISRCINKKPSKM CIAKPGQPCQIVKYFEEAEALTCKRCKKFKMGSACKKPSKTCIAKPGQKCKITYFNVGGLTCVKCYREYMNGTCQMKTQH CQAGSGESCFRQKLIVERAFLYTRTGCAPDCKNVDGGVYIRHINKCCVQNLCNQS |
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