Gene
| Gene Model ID | habu1_s1467_g05444 |
|---|---|
| Locus | habu1_scaffold1467 : 1634595 ... 1642540 : + |
| To GenomeBrowser | habu1_scaffold1467:1634595..1642540 |
| Genes list of scaffold | habu1_scaffold1467 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s1467_g05444.t1 | 1 | 1 | SP_C-Propep | 54 | 103 | 5.1e-06 | 25.8 | 3.7e-09 | 1.1e-05 | 24.7 |
| habu1_s1467_g05444.t1 | 1 | 1 | BRICHOS | 133 | 222 | 1.5e-16 | 60.0 | 1.2e-19 | 3.6e-16 | 58.8 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s1467_g05444.t1 | gi|637340850|ref|XP_008116457.1| | PREDICTED: pulmonary surfactant-associated protein C-like [Anolis carolinensis] | 0.0 |
| habu1_s1467_g05444.t1 | gi|641770078|ref|XP_008169301.1| | PREDICTED: gastrokine-2-like [Chrysemys picta bellii] | 0.0 |
| habu1_s1467_g05444.t1 | gi|527243997|ref|XP_005140347.1| | PREDICTED: pulmonary surfactant-associated protein C-like [Melopsittacus undulatus] | 1.0e-25 |
| habu1_s1467_g05444.t1 | gi|327287124|ref|XP_003228279.1| | PREDICTED: pulmonary surfactant-associated protein C-like [Anolis carolinensis] | 1.0e-21 |
| habu1_s1467_g05444.t1 | gi|529428903|ref|XP_005234271.1| | PREDICTED: pulmonary surfactant-associated protein C [Falco peregrinus] | 2.0e-20 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 0.0 |
| Venom grand-1 | 0.0 |
| Pit, infrared sensing | 0.0 |
| Nose | 0.0 |
| Brain-1 | 0.0 |
| Eye | 0.0 |
| fetal fibroblast | 0.0 |
| venom gland-2 | 0.0 |
| Brain-2 | 0.0 |
| Spleen | 0.0 |
| Lung | 0.0 |
| Liver | 0.0 |
| Kidney | 0.0 |
| Pancreas | 0.0 |
| Small intestine | 0.0 |
| Large intestine | 0.1 |
| Stomach | 0.0 |
| heart | 0.0 |
| ovary | 0.2 |
| cheek muscle | 0.0 |
Transcript
| Transcript ID | habu1_s1467_g05444.t1 |
|---|---|
| Definition | - |
>habu1_s1467_g05444.t1 aaaggtttttccatggaccggagagtgcgtggttttgtgtgctgcctgcattccacggatggggctttgcttgtttgtgc agaccggttgctggcatgctgtggcccggtactggtccatggaccgggggttggggacccctgaattagaggcttccttg gtctctctacaaaagaaaacaagcaaactaaaggtaactttagaagtatttgctccacaagccaccagaatgaatatcaa aacaaactgtgaagctaacgcagcacccgaacccccagcatacaagtttatccccaaaattccaaaagacaggaagcaag tgattctcatctcctcggtgttggtgcttctgactgcagtaattattgcagccattctcattggagtttatattactcag gaatacactgaaaggataatcaaaaccatcagccacagaaaggatggtcagaccgtggagaggaccacgatggtgaacaa tcaggaaagagtggctgcatttttgatcaagaccaataagacttcagccacagttgtctacgactacaaacatcatctga ttggcatccgaattcgggatcaaaagcaatgcttagtggtggcgatggattcaattgacgtccccagtttaaaggaaatc acccagggaatcgaacgttttggcaaagaggtctcagaaagcaagagcttggtctacagcttcaagaagggaaaacgggc tgaccgcaccactcttggaacaactataaatatcctttgtggtgatatccctatctactgggctgagaagcaacagaagg agcagcgaagcttccattgcttcatttggtttttaaacctttgcttcaatatactttaaacccgctcatacttccatgtg tctctactttggccattctctatacgtaaaagtccataattcttggtatcatactaactcccaaacacaatactgccaga agaacaggtcaactttgtcattcagtcatttctctccactgatattaatttcctcaatgaaaaacaacaataacagtcca gttgtctcttgaagaagcacccttgagactactgacattaacaatgatctggtagatttcattcctaaagatggtaaata aaggacagtcctgaggtccacacgaatgctttgtctactttatcatctggttgagcaaacaagtcaatctcagcatgggg agggggcaggtggcatgacttgttgtaggaatgatgtgacttccagcccagcatctagaggcacacacatcatctttcca gatgcaatggatacaaattctaacaccttcaactagcacaaccatgatagtcaagtgcatttgaagcattctagggaaaa gaaacaacacgggcaatctttgtgctgcccatcaacatcataaaccccacctataagtatgcatcgtgctaaaacctaaa taaaagacacctataacccactaaaa |
|
Protein
| Protein ID | habu1_s1467_g05444.t1 |
|---|---|
| Definition | - |
>habu1_s1467_g05444.t1 MDRGLGTPELEASLVSLQKKTSKLKVTLEVFAPQATRMNIKTNCEANAAPEPPAYKFIPKIPKDRKQVILISSVLVLLTA VIIAAILIGVYITQEYTERIIKTISHRKDGQTVERTTMVNNQERVAAFLIKTNKTSATVVYDYKHHLIGIRIRDQKQCLV VAMDSIDVPSLKEITQGIERFGKEVSESKSLVYSFKKGKRADRTTLGTTINILCGDIPIYWAEKQQKEQRSFHCFIWFLN LCFNIL |
|