Gene
| Gene Model ID | habu1_s1508_g05637 |
|---|---|
| Locus | habu1_scaffold1508 : 43127 ... 58945 : - |
| To GenomeBrowser | habu1_scaffold1508:43127..58945 |
| Genes list of scaffold | habu1_scaffold1508 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| programmed cell death protein 10 | GO:0005794 GO:0005829 GO:0005886 GO:0008284 GO:0010628 GO:0010629 GO:0019901 GO:0030335 GO:0032874 GO:0033138 GO:0036481 GO:0042803 GO:0043066 GO:0043406 GO:0044319 GO:0045747 GO:0047485 GO:0050821 GO:0051683 GO:0070062 GO:0090051 GO:0090168 GO:1903588 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s1508_g05637.t1 | 1 | 1 | DUF1241 | 7 | 158 | 0.0 | 219.1 | 0.0 | 0.0 | 218.7 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s1508_g05637.t1 | gi|602664759|ref|XP_007437994.1| | PREDICTED: programmed cell death protein 10 [Python bivittatus] | 0.0 |
| habu1_s1508_g05637.t1 | gi|640806063|ref|XP_008059480.1| | PREDICTED: programmed cell death protein 10 [Tarsius syrichta] | 0.0 |
| habu1_s1508_g05637.t1 | gi|31560391|ref|NP_062719.2| | programmed cell death protein 10 [Mus musculus] | 0.0 |
| habu1_s1508_g05637.t1 | gi|20127517|ref|NP_009148.2| | programmed cell death protein 10 [Homo sapiens] | 0.0 |
| habu1_s1508_g05637.t1 | gi|674044798|ref|XP_008828355.1| | PREDICTED: programmed cell death protein 10 [Nannospalax galili] | 0.0 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 29.9 |
| Venom grand-1 | 27.3 |
| Pit, infrared sensing | 28.9 |
| Nose | 37.4 |
| Brain-1 | 30.6 |
| Eye | 22.1 |
| fetal fibroblast | 57.3 |
| venom gland-2 | 30.3 |
| Brain-2 | 31.7 |
| Spleen | 21.5 |
| Lung | 22.6 |
| Liver | 14.3 |
| Kidney | 17.4 |
| Pancreas | 20.0 |
| Small intestine | 22.5 |
| Large intestine | 39.9 |
| Stomach | 21.9 |
| heart | 25.8 |
| ovary | 128.9 |
| cheek muscle | 28.7 |
Transcript
| Transcript ID | habu1_s1508_g05637.t1 |
|---|---|
| Definition | - |
>habu1_s1508_g05637.t1 gccgttgtaccaccagtaacactagagctatatatttttaagtattctaaacatctatttacaataaggagaaaaatata gctgtacttgaatgaggaacctgttgcttcagtagcctttttcttcaagagtgggtctttgaatgaggatgacaatggaa gagatgaggaatgaagcagagaccacttctatggtttccatgcctctctatgctgttatgtatcctgtctttaatgagct agaacgagtaaatctatcagcagctcaaacattgagagcagcttttattaaggcagaaagggaaaacccaggtctcacac aagatattatcataaaaattttggaaaagaaaagcattgaagttaattttaccgaatctcttttgcgcatggcagcagat gatgtagaagagtacatgattgaaaggccagagcctgaattccaagacctcaatgaaaaggcacgagcacttaaacagat tctcagcaagattccagatgagatcaatgacagagtgaggtttcttcagacaatcaaggacattgccagtgcaataaagg aacttctcgatacagtaaataatgtcttcaagaaataccaataccagaaccggagggcacttgaacaccaaaagaaagaa tttgtaaaatactccaaaagtttcagtgacactttgaaaacttattttaaagatggaaaggcaataaatgtgttcataag tgccaaccgactaattcatcaaactaacttgatactccagaccttcaaaactgtggcctgaaaaaaaaaactgtatatgt tgagagctgtacttttcaatgacggataggatacctttatatgtaaactttaaagttttgactgtgtaaattatcaatcc caattgaagggacttaatgcaggattttgaatgggatttattgccatcttacaccatatttttgtaaaaacatagcttaa tcataatcacacaatgaagattttgcatcacttttttgctattattcttttcagaattataagccaaaagaatttacgcc ttaatgtgtcattatgtaacattccttataagaactgtaaatatttgatgttccgtttctgacattttaacttgaaagcg aaaaactgcaacagaattatgtatttaacaatattggtggcaaatattcaataaatagtttacatctgtttatctct |
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Protein
| Protein ID | habu1_s1508_g05637.t1 |
|---|---|
| Definition | - |
>habu1_s1508_g05637.t1 MEEMRNEAETTSMVSMPLYAVMYPVFNELERVNLSAAQTLRAAFIKAERENPGLTQDIIIKILEKKSIEVNFTESLLRMA ADDVEEYMIERPEPEFQDLNEKARALKQILSKIPDEINDRVRFLQTIKDIASAIKELLDTVNNVFKKYQYQNRRALEHQK KEFVKYSKSFSDTLKTYFKDGKAINVFISANRLIHQTNLILQTFKTVA |
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