Gene
| Gene Model ID | habu1_s1518_g05672 |
|---|---|
| Locus | habu1_scaffold1518 : 44856 ... 60186 : + |
| To GenomeBrowser | habu1_scaffold1518:44856..60186 |
| Genes list of scaffold | habu1_scaffold1518 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| a g-specific adenine dna glycosylase isoform x1 | GO:0003677 GO:0005634 GO:0005739 GO:0006284 GO:0016787 GO:0032407 GO:0051539 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s1518_g05672.t2 | 1 | 1 | HhH-GPD | 87 | 218 | 4.4e-21 | 75.1 | 3.4e-23 | 8.3e-20 | 71.0 |
| habu1_s1518_g05672.t2 | 1 | 1 | NUDIX_4 | 350 | 463 | 1.2e-18 | 66.5 | 1.5e-21 | 3.7e-18 | 64.9 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 2.5 |
| Venom grand-1 | 9.4 |
| Pit, infrared sensing | 3.4 |
| Nose | 2.9 |
| Brain-1 | 1.1 |
| Eye | 2.6 |
| fetal fibroblast | 2.7 |
| venom gland-2 | 2.5 |
| Brain-2 | 1.6 |
| Spleen | 4.3 |
| Lung | 4.5 |
| Liver | 5.5 |
| Kidney | 2.9 |
| Pancreas | 5.0 |
| Small intestine | 5.0 |
| Large intestine | 3.7 |
| Stomach | 4.1 |
| heart | 2.0 |
| ovary | 27.8 |
| cheek muscle | 2.7 |
Transcript
| Transcript ID | habu1_s1518_g05672.t1 |
|---|---|
| Definition | - |
>habu1_s1518_g05672.t1 cgcagttatgtaagattatctaaacaggagtcccgttcaaattaatataattcgcagaaaaatgaatgtagtattccagc tttcctaacctagacgctttaaaagtttttggcatgctatcaaaaactaaaagcgatggggtaatatgtttagcaactgt gggtttttctgcatattttttaaaaaaaattaaacccaacttctgaggtcatcaaaattttcattttgcggcatattaag gtaaacgctgcatccagcctactttgaaagcagatccccacaagccgagaatagatgcaagtatgcatataaaaacattt tttaaaatatcatattcggacttggcagcgggcaagagttttcaattcaatattttacaaaaattgccgagtgggaggaa agattttccattgcagtcttagcaacaactcatttattttttaaaaaaatcagcgatatacttttttatttcataattcg ctgcgggaaagtagctaataaagttttaagaaaaaaattaaaatatgcgaattacaaaatagtatcaagcaggcagttac actatacataagcataaactggcatgctcacgtttggttgtttttcatcaaatgaccagtgctagcttaacgaggattaa ttcttttcctaacaagctttagctactaagatcttagtttttcaatcacgtaaataaaacctggtggtatgatttataaa aaagatctggagaaagagttagtctctactcctccccaatgcttccgccgagttaaaacttcgcgcctccaaatcgcaaa atctgcagaacagcacaaactaagtctcgggtctatttgctgcttgaaatattaattgcagggcagcttgcaaagaacac cgccccctctctccattagaaacacacctctttgtacacggagtaagaattacgttcgaaagtgcatagcctcccgttgt aggaaaaaaataccttggcaatgagtaaacgccaaaggtcaaagtgcagcaatatgggaaaatccaaaaatcatcaaaga aatgtgagaaaaggacttgtactttacaaagacgtgccaagttcccagtctgtatttcacacatttagtgatgcagctga aatcagagacttccagaagagactgctgtcttggtacaataaatgtaaacgagatttgccatggaggcaactggctgcaa ctgaaactgatgatgacagacgagcatatgctgtgtgggtatcggagatcatgctccagcaaacccaagtagcttcagtg attaattactacaatcgttggatgcagaaatggccaaccatgcaggatttagccgaagcttcattagaggaagtgaatga actatgggcaggccttggctactattctcgaggtaaaagactccaggaaggtgcacataaggtaatgtcacaactgtcag gtcatatgccaagaacagcagaagaactgcaaaagcagctgccaggagtagggaagtacactgcaggagctattgcctcc atagcatttggccaggtgacaggagtagtagatgggaacgtgactcgagttttgtgtcggacaagagccattggtgctga ccctgccaattcagctgttgcagacacactctgggtgttagccaacactctggttgaccagtcccatccaggtgacttta atcaagcaatgatggaattgggtgcaacagtgtgtactcccaagaccccattatgcatggaatgtccagtgaaacagcac tgcagaggtctccataaagtggaaaaggatcggttaaattccaccaagagactgttcggaaaatctgcttctaaaagcct ccctgtgctagatatggaggaatgtgctgctgtctcaggaagctgttccctctgcctgcctccttcagtaccatgggagc ccagccttggtgtcactaattttccaagaaaagctaccaagaagcagcccagaatagaacacacagccacatgcgtgcta gagaggagatgcagtgatgggaatccagagtactttcttgtgaagaggcccagctcaggtctgctagctggactgtggga gtttcctagcatcctccttgaacaagggcaggaaaagcaacagaaagtgattctggcagatcaccttctagcctcgcttg gcaatgacttggcaccgaggcaactacagtatgttggagaggttctccatatcttctcccacatccgccaaacatatgtg atctattttttgaatgtggacaaagatgaagaaaattggaataggaatgtggaactgccagcatcccgatgggtgaccaa aacagaattgcagatatcagccatttccacagctatgaaaaaggtcttcaaagtttatgaaaaatggagctatagaatca acgatgcccaagctgtgaagaagaagaaacgggactctctcaggaccagccaattaaagcctaaagaacagactagttct tccaagaacctgcgttctttgcattcgtttcttagagctgatctcaacagctgactgcaagttcagacacagtatagaga aaacatgaaaagtgtacatctttgcactcccaatattcttgtacagtactttgaaatctgggtcaatcatcttttgaagg gcctgggaacagggtcctctagccatgaagtgagatgtgtctgcccagtatgtgagatactgaaggacagtgctgtgaaa catatcctgttgtcatttgatttcctcctcatttgctaaatgtcttattaaataagcactgctcttagcactgcatgccc aaccccaatctgagttgcagctatagatgtgccaaagaaagagatcaactagcatttttttttttttatgaaaaaagaaa tgtggcaaaagcaggataaaggtttttttttattattattagatccagattcttttgggaacaagtaactgaataattgc agtttgcctacattgtacaattgtattgcctgccattttcctgtatgatcaactattttaatgcttgaaatatcttgttt tataactgtggcttctctaataaaacttttaatgattgtttattaa |
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| Transcript ID | habu1_s1518_g05672.t2 |
| Definition | - |
>habu1_s1518_g05672.t2 gtttccgtgatggctctggggctacaaagagccgtacagatgagagggaaggggaaaaaaagaaacgttgtatgcctcct ttgaaaggacgtctgttttctaataattgttccatttttgagcgtgtaagaacaaaacaatcctcctacacggatgttgt tggcacgtgcttggcaatgagtaaacgccaaaggtcaaagtgcagcaatatgggaaaatccaaaaatcatcaaagaaatg tgagaaaaggacttgtactttacaaagacgtgccaagttcccagtctgtatttcacacatttagtgatgcagctgaaatc agagacttccagaagagactgctgtcttggtacaataaatgtaaacgagatttgccatggaggcaactggctgcaactga aactgatgatgacagacgagcatatgctgtgtgggtatcggagatcatgctccagcaaacccaagtagcttcagtgatta attactacaatcgttggatgcagaaatggccaaccatgcaggatttagccgaagcttcattagaggaagtgaatgaacta tgggcaggccttggctactattctcgaggtaaaagactccaggaaggtgcacataaggtaatgtcacaactgtcaggtca tatgccaagaacagcagaagaactgcaaaagcagctgccaggagtagggaagtacactgcaggagctattgcctccatag catttggccaggtgacaggagtagtagatgggaacgtgactcgagttttgtgtcggacaagagccattggtgctgaccct gccaattcagctgttgcagacacactctgggtgttagccaacactctggttgaccagtcccatccaggtgactttaatca agcaatgatggaattgggtgcaacagtgtgtactcccaagaccccattatgcatggaatgtccagtgaaacagcactgca gaggtctccataaagtggaaaaggatcggttaaattccaccaagagactgttcggaaaatctgcttctaaaagcctccct gtgctagatatggaggaatgtgctgctgtctcaggaagctgttccctctgcctgcctccttcagtaccatgggagcccag ccttggtgtcactaattttccaagaaaagctaccaagaagcagcccagaatagaacacacagccacatgcgtgctagaga ggagatgcagtgatgggaatccagagtactttcttgtgaagaggcccagctcaggtctgctagctggactgtgggagttt cctagcatcctccttgaacaagggcaggaaaagcaacagaaagtgattctggcagatcaccttctagcctcgcttggcaa tgacttggcaccgaggcaactacagtatgttggagaggttctccatatcttctcccacatccgccaaacatatgtgatct attttttgaatgtggacaaagatgaagaaaattggaataggaatgtggaactgccagcatcccgatgggtgaccaaaaca gaattgcagatatcagccatttccacagctatgaaaaaggtcttcaaagtttatgaaaaatggagctatagaatcaacga tgcccaagctgtgaagaagaagaaacgggactctctcaggaccagccaattaaagcctaaagaacagactagttcttcca agaacctgcgttctttgcattcgtttcttagagctgatctcaacagctgactgcaagttcagacacagtatagagaaaac atgaaaagtgtacatctttgcactcccaatattcttgtacagtactttgaaatctgggtcaatcatcttttgaagggcct gggaacagggtcctctagccatgaagtgagatgtgtctgcccagtatgtgagatactgaaggacagtgctgtgaaacata tcctgttgtcatttgatttcctcctcatttgctaaatgtcttattaaataagcactgctcttagcactgcatgcccaacc ccaatctgagttgcagctatagatgtgccaaagaaagagatcaactagcatttttttttttttatgaaaaaagaaatgtg gcaaaagcaggataaaggtttttttttattattattagatccagattcttttgggaacaagtaactgaataattgcagtt tgcctacattgtacaattgtattgcctgccattttcctgtatgatcaactattttaatgcttgaaatatcttgttttata actgtggcttctctaataaaacttttaatgattgtttattaa |
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Protein
| Protein ID | habu1_s1518_g05672.t1 |
|---|---|
| Definition | - |
>habu1_s1518_g05672.t1 MSKRQRSKCSNMGKSKNHQRNVRKGLVLYKDVPSSQSVFHTFSDAAEIRDFQKRLLSWYNKCKRDLPWRQLAATETDDDR RAYAVWVSEIMLQQTQVASVINYYNRWMQKWPTMQDLAEASLEEVNELWAGLGYYSRGKRLQEGAHKVMSQLSGHMPRTA EELQKQLPGVGKYTAGAIASIAFGQVTGVVDGNVTRVLCRTRAIGADPANSAVADTLWVLANTLVDQSHPGDFNQAMMEL GATVCTPKTPLCMECPVKQHCRGLHKVEKDRLNSTKRLFGKSASKSLPVLDMEECAAVSGSCSLCLPPSVPWEPSLGVTN FPRKATKKQPRIEHTATCVLERRCSDGNPEYFLVKRPSSGLLAGLWEFPSILLEQGQEKQQKVILADHLLASLGNDLAPR QLQYVGEVLHIFSHIRQTYVIYFLNVDKDEENWNRNVELPASRWVTKTELQISAISTAMKKVFKVYEKWSYRINDAQAVK KKKRDSLRTSQLKPKEQTSSSKNLRSLHSFLRADLNS |
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| Protein ID | habu1_s1518_g05672.t2 |
| Definition | - |
>habu1_s1518_g05672.t2 MSKRQRSKCSNMGKSKNHQRNVRKGLVLYKDVPSSQSVFHTFSDAAEIRDFQKRLLSWYNKCKRDLPWRQLAATETDDDR RAYAVWVSEIMLQQTQVASVINYYNRWMQKWPTMQDLAEASLEEVNELWAGLGYYSRGKRLQEGAHKVMSQLSGHMPRTA EELQKQLPGVGKYTAGAIASIAFGQVTGVVDGNVTRVLCRTRAIGADPANSAVADTLWVLANTLVDQSHPGDFNQAMMEL GATVCTPKTPLCMECPVKQHCRGLHKVEKDRLNSTKRLFGKSASKSLPVLDMEECAAVSGSCSLCLPPSVPWEPSLGVTN FPRKATKKQPRIEHTATCVLERRCSDGNPEYFLVKRPSSGLLAGLWEFPSILLEQGQEKQQKVILADHLLASLGNDLAPR QLQYVGEVLHIFSHIRQTYVIYFLNVDKDEENWNRNVELPASRWVTKTELQISAISTAMKKVFKVYEKWSYRINDAQAVK KKKRDSLRTSQLKPKEQTSSSKNLRSLHSFLRADLNS |
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