Gene
| Gene Model ID | habu1_s1518_g05674 |
|---|---|
| Locus | habu1_scaffold1518 : 68976 ... 74237 : + |
| To GenomeBrowser | habu1_scaffold1518:68976..74237 |
| Genes list of scaffold | habu1_scaffold1518 |
Annotation by Blast2GO
| Annotation | GO |
|---|---|
| low quality protein: selenoprotein pb-like | GO:0008430 |
Hmmer Search for Pfam
| query | Total | ID | Target | From | To | Eval | Score | cEval | iEval | Score |
|---|---|---|---|---|---|---|---|---|---|---|
| habu1_s1518_g05674.t1 | 1 | 1 | SelP_N | 1 | 157 | 2.8026e-44 | 151.2 | 0.0 | 3.64338e-44 | 150.9 |
Blast Hit to nr / sp
| query | Subject ID | Subject Name | evalue |
|---|---|---|---|
| habu1_s1518_g05674.t1 | gi|602626632|ref|XP_007420270.1| | PREDICTED: LOW QUALITY PROTEIN: selenoprotein Pb-like [Python bivittatus] | 0.0 |
| habu1_s1518_g05674.t1 | gi|637294569|ref|XP_008107731.1| | PREDICTED: LOW QUALITY PROTEIN: selenoprotein Pb-like [Anolis carolinensis] | 0.0 |
| habu1_s1518_g05674.t1 | gi|513197797|ref|XP_004936801.1| | PREDICTED: selenoprotein Pb isoform X2 [Gallus gallus] | 0.0 |
| habu1_s1518_g05674.t1 | gi|704310032|ref|XP_010165657.1| | PREDICTED: selenoprotein Pb-like, partial [Caprimulgus carolinensis] | 2.8026e-45 |
| habu1_s1518_g05674.t1 | gi|696975488|ref|XP_009557261.1| | PREDICTED: selenoprotein Pb-like [Cuculus canorus] | 2.8026e-45 |
Expression profile
| Libraries | FPKM |
|---|---|
| >Adult | |
| Venom fang forming tissue | 0.8 |
| Venom grand-1 | 1.6 |
| Pit, infrared sensing | 3.7 |
| Nose | 0.7 |
| Brain-1 | 4.7 |
| Eye | 2.9 |
| fetal fibroblast | 1.2 |
| venom gland-2 | 0.9 |
| Brain-2 | 56.7 |
| Spleen | 5.0 |
| Lung | 20.0 |
| Liver | 315.0 |
| Kidney | 0.3 |
| Pancreas | 7.8 |
| Small intestine | 3.6 |
| Large intestine | 3.0 |
| Stomach | 0.4 |
| heart | 4.7 |
| ovary | 1.7 |
| cheek muscle | 2.5 |
Transcript
| Transcript ID | habu1_s1518_g05674.t1 |
|---|---|
| Definition | - |
>habu1_s1518_g05674.t1 acatcaggagagtcccagttttctcagtggacggagcagaacaacggcaacattcaccagggaaaaggctgaagggaagt agtttgcaatgggctacctgcccctgaccacaaaagccttgctgctgggattagtgattgctactacaatagcagaaggg gttgtggttgagaaccaaaccagaatatgccaaccagccccactctgggagataaatggcatagacccgatggctggaat ggagggccaggtgacagtggtggttcttttgaaggccagctgacagttctgtctcaagcaagcagccagccttggcagct tgcaagagaaattgtctggcgatggcatggccaatgtcagtttcatgattgtgaatgaaaagacccctttctccagggca atgtattgggagctcaaacgacatgctcccaaaggcattccagtttaccagcaacaaatcctggaacctgatgtctggca aattctaaagggcaacaaggatgactttctgatatacgacaggtgcaagaagctcactttccatatccagttgccataca gttttctgcacttaccatatgttgaggcagctgtgcgctacacataccacaaagactattgtggcaattgttcctggtat tatctgaacagcagccaggaggtgaataatgcaacaagtattcctgtgatgacaactgaggctccccgagacaaagtgaa gagcctggaagtattgaaaagtcagcctgaaaagaaaaaccaagaaacgcctaacttcaaacacatagtccagagccatt cccatcatgggggaattaacacagcccaaccatccctccattctcaaaaccattccattcaccaccacacaagggactct cactaaatggctacagtatggaaatacaccctcaactgttaggaaccccaaaatcttacactaaaaaaattaagcaagca atataagaaatagctaaggaataaatttacacatctcacgaaggaat |
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Protein
| Protein ID | habu1_s1518_g05674.t1 |
|---|---|
| Definition | - |
>habu1_s1518_g05674.t1 MYWELKRHAPKGIPVYQQQILEPDVWQILKGNKDDFLIYDRCKKLTFHIQLPYSFLHLPYVEAAVRYTYHKDYCGNCSWY YLNSSQEVNNATSIPVMTTEAPRDKVKSLEVLKSQPEKKNQETPNFKHIVQSHSHHGGINTAQPSLHSQNHSIHHHTRDS H |
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